prot_H-elongata_contig139071.2718.1 (polypeptide) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig139071.2718.1 vs. uniprot
Match: A0A6L2LV04_TANCI (Copia protein n=1 Tax=Tanacetum cinerariifolium TaxID=118510 RepID=A0A6L2LV04_TANCI) HSP 1 Score: 97.1 bits (240), Expect = 4.930e-23 Identity = 53/133 (39.85%), Postives = 80/133 (60.15%), Query Frame = 0
Query: 5 IARGVWQVVERPKGKTVLGTRVVFKRKIDKDGRIKKYKFRLVAQGFRQVKGIHYEESSSMTPAQASIRMVLGMIAALGWEARQLDVDMAYLET----EIYIELPEAYRDFRK--HVGLLNKAMYGIIHAGLLW 131
I+ VW+ V PK T++GT+ VF+ K+D++G + +YK RLVAQG+ Q +GI Y+E+ + SIR++LG L ++ Q+DV A+L E+Y+ P + DF K HV L KA+YG+ A W
Sbjct: 9 ISNDVWEFVPNPKDMTIIGTKWVFRNKLDENGVVSRYKARLVAQGYNQQEGIDYDETYAPVARLESIRILLGYACTLDFKLFQMDVKSAFLNDFNNEEVYMAQPLGFIDFAKPNHVYRLKKALYGLKQAPKAW 141
BLAST of mRNA_H-elongata_contig139071.2718.1 vs. uniprot
Match: A0A0A9Y7J8_LYGHE (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=1 Tax=Lygus hesperus TaxID=30085 RepID=A0A0A9Y7J8_LYGHE) HSP 1 Score: 97.1 bits (240), Expect = 1.030e-22 Identity = 53/134 (39.55%), Postives = 79/134 (58.96%), Query Frame = 0
Query: 10 WQVVERPKGKTVLGTRVVFKRKIDKDGRIKKYKFRLVAQGFRQVKGIHYEESSSMTPAQASIRMVLGMIAALGWEARQLDVDMAYL----ETEIYIELPEAY--------RDFRKHVGLLNKAMYGIIHAGLLW 131
W +V+RP+GKTV+G+R VF+ K+ DG +++ K RLVA+GF Q+ G HY E+ + +SIR V+ + A E QLD AYL E EIY+E+P+ +D V + KA+YG+ +G +W
Sbjct: 49 WTLVDRPEGKTVVGSRWVFRTKLKADGTVERRKARLVAKGFTQIPGTHYNETYTSVARLSSIRFVIALAAERNLELEQLDFTCAYLNGEIEEEIYMEVPKEIETILGRKTQDRENKVSRIQKALYGLKQSGRMW 182
BLAST of mRNA_H-elongata_contig139071.2718.1 vs. uniprot
Match: A0A087FZR2_ARAAL (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Arabis alpina TaxID=50452 RepID=A0A087FZR2_ARAAL) HSP 1 Score: 99.8 bits (247), Expect = 8.990e-22 Identity = 53/133 (39.85%), Postives = 81/133 (60.90%), Query Frame = 0
Query: 5 IARGVWQVVERPKGKTVLGTRVVFKRKIDKDGRIKKYKFRLVAQGFRQVKGIHYEESSSMTPAQASIRMVLGMIAALGWEARQLDVDMAYL----ETEIYIELPEAYRD--FRKHVGLLNKAMYGIIHAGLLW 131
+ VW++V RP G V+GT+ +FK KID+DG + + K RLVAQG+ Q++G+ +EE+ + SIR LGM L ++ Q+DV A+L + E+Y+E P+ + D +HV L KA+YG+ A W
Sbjct: 438 VRNDVWELVPRPVGVNVVGTKWIFKNKIDEDGVVVRNKARLVAQGYSQIEGVDFEETFAPVARLESIRFFLGMACILNFKVFQMDVKSAFLNGFLQEEVYVEQPKGFEDPTHPEHVYKLKKALYGLKQAPRAW 570
BLAST of mRNA_H-elongata_contig139071.2718.1 vs. uniprot
Match: A0A087GV99_ARAAL (Integrase catalytic domain-containing protein n=2 Tax=Arabis alpina TaxID=50452 RepID=A0A087GV99_ARAAL) HSP 1 Score: 99.8 bits (247), Expect = 8.990e-22 Identity = 53/137 (38.69%), Postives = 84/137 (61.31%), Query Frame = 0
Query: 1 MKGQIARGVWQVVERPKGKTVLGTRVVFKRKIDKDGRIKKYKFRLVAQGFRQVKGIHYEESSSMTPAQASIRMVLGMIAALGWEARQLDVDMAYL----ETEIYIELPEAYRD--FRKHVGLLNKAMYGIIHAGLLW 131
+K + VW++V RP+G V+GT+ +FK KID +G + + K RLVAQG+ Q++G+++EE+ + SIR LGM L ++ Q+DV A+L + E+Y+E P+ + D +HV L KA+YG+ A W
Sbjct: 691 LKQFVRNDVWELVPRPEGVNVVGTKWIFKNKIDANGVVVRNKARLVAQGYSQIEGVNFEETFAPVARLESIRFFLGMTCILNFKVFQMDVKSAFLNGFLQEEVYVEQPKGFEDPAHPEHVYKLKKALYGLKQAPRAW 827
BLAST of mRNA_H-elongata_contig139071.2718.1 vs. uniprot
Match: A0A0C2WM40_AMAMK (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Amanita muscaria (strain Koide BX008) TaxID=946122 RepID=A0A0C2WM40_AMAMK) HSP 1 Score: 98.6 bits (244), Expect = 2.060e-21 Identity = 52/130 (40.00%), Postives = 76/130 (58.46%), Query Frame = 0
Query: 8 GVWQVVERPKGKTVLGTRVVFKRKIDKDGRIKKYKFRLVAQGFRQVKGIHYEESSSMTPAQA--SIRMVLGMIAALGWEARQLDVDMAYL----ETEIYIELPEAYRDFRKHVGLLNKAMYGIIHAGLLW 131
G W++V+ P+GK ++G + VF +K D++GRI ++K RLVAQGF Q G+ Y + + P S+R L + A WE RQ DV AYL + EIY+ P + D V L K++YG+ AG +W
Sbjct: 75 GTWELVDLPEGKNIVGCKWVFTKKRDEEGRINRFKARLVAQGFSQKPGVDYSNTGTFAPVMRFESLRTHLALAAVNNWELRQFDVKSAYLNGSLDEEIYMRQPPGFDDGSGRVCRLKKSIYGLKQAGNIW 204
BLAST of mRNA_H-elongata_contig139071.2718.1 vs. uniprot
Match: A0A6L2J662_TANCI (Copia protein n=1 Tax=Tanacetum cinerariifolium TaxID=118510 RepID=A0A6L2J662_TANCI) HSP 1 Score: 98.6 bits (244), Expect = 2.260e-21 Identity = 52/133 (39.10%), Postives = 83/133 (62.41%), Query Frame = 0
Query: 5 IARGVWQVVERPKGKTVLGTRVVFKRKIDKDGRIKKYKFRLVAQGFRQVKGIHYEESSSMTPAQASIRMVLGMIAALGWEARQLDVDMAYLE----TEIYIELPEAYRDFRK--HVGLLNKAMYGIIHAGLLW 131
IA VW++V +P+ T++GT+ VF+ K+D++G + + K RLVAQG+ Q +GI+Y+E+ + SIR++L + AL ++ Q+DV A+L E+Y+ P + DF K HV L KA+YG+ A W
Sbjct: 481 IANDVWELVPQPRHMTIIGTKWVFRNKLDENGVVSRNKARLVAQGYNQQEGINYDETYAPVARLGSIRILLAYVCALDFKLFQMDVKSAFLNGFINEEVYVAQPSGFIDFEKPYHVYKLKKALYGLKQAPKAW 613
BLAST of mRNA_H-elongata_contig139071.2718.1 vs. uniprot
Match: A0A6L2JPC2_TANCI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Tanacetum cinerariifolium TaxID=118510 RepID=A0A6L2JPC2_TANCI) HSP 1 Score: 96.3 bits (238), Expect = 2.770e-21 Identity = 54/129 (41.86%), Postives = 79/129 (61.24%), Query Frame = 0
Query: 5 IARGVWQVVERPKGKTVLGTRVVFKRKIDKDGRIKKYKFRLVAQGFRQVKGIHYEESSSMTPAQASIRMVLGMIAALGWEARQLDVDMAYLET----EIYIELPEAYRDFRK--HVGLLNKAMYGIIHA 127
IA VW++V +PK T++GT+ VF+ K+D++G I + K RLVAQG+ Q +GI Y E+ + SIR++L AL ++ Q+DV A+L E+YI P + DF K HV L KA+YG+ A
Sbjct: 111 IANAVWELVPQPKNMTIIGTKWVFRNKLDENGIISRNKARLVAQGYNQQEGIDYNETYAPVARLESIRILLAYACALDFKLFQMDVKSAFLNDFINEEVYIAQPPGFTDFEKSNHVYKLKKALYGLKQA 239
BLAST of mRNA_H-elongata_contig139071.2718.1 vs. uniprot
Match: A0A6L2JYN8_TANCI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Tanacetum cinerariifolium TaxID=118510 RepID=A0A6L2JYN8_TANCI) HSP 1 Score: 98.2 bits (243), Expect = 3.110e-21 Identity = 53/133 (39.85%), Postives = 82/133 (61.65%), Query Frame = 0
Query: 5 IARGVWQVVERPKGKTVLGTRVVFKRKIDKDGRIKKYKFRLVAQGFRQVKGIHYEESSSMTPAQASIRMVLGMIAALGWEARQLDVDMAYLE----TEIYIELPEAYRDFRK--HVGLLNKAMYGIIHAGLLW 131
+A VW++V +PK T++GT+ VF+ K+D++G + + K RLVAQG+ Q +GI Y+E+ ++ SIR+VL AL ++ Q+DV A+L E+Y+ P + DF K HV L KA+YG+ A W
Sbjct: 547 VANNVWELVPQPKNITIIGTKWVFRNKLDENGIVSRNKARLVAQGYNQQEGIDYDETYALVVRLESIRIVLAYACALDFKLFQMDVKSAFLNGFINEEVYVTQPPGFIDFEKPDHVYKLKKALYGLKPAPKAW 679
BLAST of mRNA_H-elongata_contig139071.2718.1 vs. uniprot
Match: A0A177TV96_9BASI (Integrase catalytic domain-containing protein n=1 Tax=Tilletia indica TaxID=43049 RepID=A0A177TV96_9BASI) HSP 1 Score: 97.8 bits (242), Expect = 4.360e-21 Identity = 50/126 (39.68%), Postives = 78/126 (61.90%), Query Frame = 0
Query: 10 WQVVERPKGKTVLGTRVVFKRKIDKDGRIKKYKFRLVAQGFRQVKGIHYEESSSMTPAQASIRMVLGMIAALGWEARQLDVDMAYL----ETEIYIELPEAYRDFRKHVGLLNKAMYGIIHAGLLW 131
W++VE PKG+ V+G+R V+K K+D+DGR +YK RLVAQGF Q GI + ++ + ++IR+++ + AL +D+ AYL + E+Y++ P Y D V LL +A+YG+ AG W
Sbjct: 725 WELVELPKGRDVVGSRWVYKLKLDRDGRASRYKGRLVAQGFTQRDGIDFSDTFAPVARLSTIRIIISLALALSLNLGSIDIKTAYLNGKLQEEVYMQQPPEYDDGTGRVCLLRRAIYGLKQAGRAW 850
BLAST of mRNA_H-elongata_contig139071.2718.1 vs. uniprot
Match: A0A540MBJ7_MALBA (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Malus baccata TaxID=106549 RepID=A0A540MBJ7_MALBA) HSP 1 Score: 95.1 bits (235), Expect = 4.680e-21 Identity = 47/124 (37.90%), Postives = 82/124 (66.13%), Query Frame = 0
Query: 7 RGVWQVVERPKGKTVLGTRVVFKRKIDKDGRIKKYKFRLVAQGFRQVKGIHYEESSSMTPAQASIRMVLGMIAALGWEARQLDVDMAYL----ETEIYIELPEAYRDFR--KHVGLLNKAMYGI 124
+G W++V P + V+G++ V+K K D+DG++ +YK RLVA G+ Q +G+ Y+E+ S+ ++R+VL + A GWE RQLDV A+L + E++++ P+ ++D + HV L K++YG+
Sbjct: 165 QGTWELVPPPVDRNVIGSKWVYKIKKDQDGKVSRYKARLVAHGYSQEQGLDYDETFSLVVRHTTVRLVLSLAAMKGWELRQLDVKNAFLHGELQEEVFMKQPQGFQDPQHPNHVCKLLKSLYGL 288 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig139071.2718.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-elongata_contig139071.2718.1 ID=prot_H-elongata_contig139071.2718.1|Name=mRNA_H-elongata_contig139071.2718.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=132bpback to top |