prot_H-elongata_contig138898.2711.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig138898.2711.1
Unique Nameprot_H-elongata_contig138898.2711.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length53
Homology
BLAST of mRNA_H-elongata_contig138898.2711.1 vs. uniprot
Match: D8LRW3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRW3_ECTSI)

HSP 1 Score: 84.3 bits (207), Expect = 9.790e-18
Identity = 41/53 (77.36%), Postives = 45/53 (84.91%), Query Frame = 0
Query:    1 MIEEFNRRRNKTARVFLLSTRAGNMGINLVAANRVILMDTSWNPANDLQAMFR 53
            +I  FN    K+  VFLLST+AGNMGINLVAANRV+LMDTSWNPANDLQAMFR
Sbjct: 2553 LISRFNDPERKSTGVFLLSTKAGNMGINLVAANRVVLMDTSWNPANDLQAMFR 2605          
BLAST of mRNA_H-elongata_contig138898.2711.1 vs. uniprot
Match: A0A6H5KF11_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF11_9PHAE)

HSP 1 Score: 83.6 bits (205), Expect = 1.830e-17
Identity = 41/53 (77.36%), Postives = 45/53 (84.91%), Query Frame = 0
Query:    1 MIEEFNRRRNKTARVFLLSTRAGNMGINLVAANRVILMDTSWNPANDLQAMFR 53
            +I  FN    K+  VFLLST+AGNMGINLVAANRV+LMDTSWNPANDLQAMFR
Sbjct: 2655 LISRFNDPDRKSTGVFLLSTKAGNMGINLVAANRVVLMDTSWNPANDLQAMFR 2707          
BLAST of mRNA_H-elongata_contig138898.2711.1 vs. uniprot
Match: A0A7S0Z154_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0Z154_9CRYP)

HSP 1 Score: 76.3 bits (186), Expect = 8.350e-17
Identity = 35/52 (67.31%), Postives = 45/52 (86.54%), Query Frame = 0
Query:    2 IEEFNRRRNKTARVFLLSTRAGNMGINLVAANRVILMDTSWNPANDLQAMFR 53
            I+ FN   N +AR+FL+STRAG++G+NLVAANRV+LMD SWNP +DLQA+FR
Sbjct:   42 IDNFNHIDNVSARLFLVSTRAGSLGVNLVAANRVVLMDVSWNPTHDLQAIFR 93          
BLAST of mRNA_H-elongata_contig138898.2711.1 vs. uniprot
Match: A0A1W4UEB2_DROFC (transcriptional regulator ATRX homolog n=3 Tax=Drosophila ficusphila TaxID=30025 RepID=A0A1W4UEB2_DROFC)

HSP 1 Score: 76.3 bits (186), Expect = 1.110e-16
Identity = 35/53 (66.04%), Postives = 43/53 (81.13%), Query Frame = 0
Query:    1 MIEEFNRRRNKTARVFLLSTRAGNMGINLVAANRVILMDTSWNPANDLQAMFR 53
            MI+ FN   NK ARVFL+S+RAG  GINL+ ANRVI++DTSWNP+ND Q +FR
Sbjct:    1 MIKRFNSEANKRARVFLISSRAGGQGINLIGANRVIILDTSWNPSNDQQNIFR 53          
BLAST of mRNA_H-elongata_contig138898.2711.1 vs. uniprot
Match: A0A811UH95_CERCA ((Mediterranean fruit fly) hypothetical protein n=2 Tax=Ceratitis capitata TaxID=7213 RepID=A0A811UH95_CERCA)

HSP 1 Score: 76.3 bits (186), Expect = 1.700e-16
Identity = 36/53 (67.92%), Postives = 43/53 (81.13%), Query Frame = 0
Query:    1 MIEEFNRRRNKTARVFLLSTRAGNMGINLVAANRVILMDTSWNPANDLQAMFR 53
            MIE+FN   NK ARVFL+S+RAG  GINL  ANRVI++DTSWNP+ND Q +FR
Sbjct:   46 MIEQFNSISNKRARVFLISSRAGGQGINLTGANRVIILDTSWNPSNDQQNIFR 98          
BLAST of mRNA_H-elongata_contig138898.2711.1 vs. uniprot
Match: B4G7A9_DROPE (GL18989 n=1 Tax=Drosophila persimilis TaxID=7234 RepID=B4G7A9_DROPE)

HSP 1 Score: 75.1 bits (183), Expect = 1.190e-15
Identity = 35/53 (66.04%), Postives = 42/53 (79.25%), Query Frame = 0
Query:    1 MIEEFNRRRNKTARVFLLSTRAGNMGINLVAANRVILMDTSWNPANDLQAMFR 53
            MI+ FN   NK ARVFL+S RAG  GINL+ ANRVI++DTSWNP+ND Q +FR
Sbjct:    1 MIKRFNSEVNKRARVFLISARAGGQGINLIGANRVIILDTSWNPSNDQQNIFR 53          
BLAST of mRNA_H-elongata_contig138898.2711.1 vs. uniprot
Match: A0A8B7L5P5_DROEL (transcriptional regulator ATRX homolog n=4 Tax=melanogaster group TaxID=32346 RepID=A0A8B7L5P5_DROEL)

HSP 1 Score: 73.6 bits (179), Expect = 1.280e-15
Identity = 34/53 (64.15%), Postives = 42/53 (79.25%), Query Frame = 0
Query:    1 MIEEFNRRRNKTARVFLLSTRAGNMGINLVAANRVILMDTSWNPANDLQAMFR 53
            MI+ FN   N  ARVFL+S+RAG  GINL+ ANRVI++DTSWNP+ND Q +FR
Sbjct:    1 MIKRFNSESNGRARVFLISSRAGGQGINLIGANRVIILDTSWNPSNDQQNIFR 53          
BLAST of mRNA_H-elongata_contig138898.2711.1 vs. uniprot
Match: A0A0L0BQA0_LUCCU (Putative transcriptional regulator ATRX n=1 Tax=Lucilia cuprina TaxID=7375 RepID=A0A0L0BQA0_LUCCU)

HSP 1 Score: 78.2 bits (191), Expect = 1.440e-15
Identity = 36/53 (67.92%), Postives = 43/53 (81.13%), Query Frame = 0
Query:    1 MIEEFNRRRNKTARVFLLSTRAGNMGINLVAANRVILMDTSWNPANDLQAMFR 53
            MI EFN   NKTARVFL+S +AG  GINL+ ANRVI++DTSWNP+ND Q +FR
Sbjct:  103 MINEFNNVENKTARVFLISAKAGGQGINLIGANRVIILDTSWNPSNDQQNIFR 155          
BLAST of mRNA_H-elongata_contig138898.2711.1 vs. uniprot
Match: UPI001F06C71C (transcriptional regulator ATRX-like isoform X1 n=3 Tax=Lucilia TaxID=7374 RepID=UPI001F06C71C)

HSP 1 Score: 78.2 bits (191), Expect = 1.440e-15
Identity = 36/53 (67.92%), Postives = 43/53 (81.13%), Query Frame = 0
Query:    1 MIEEFNRRRNKTARVFLLSTRAGNMGINLVAANRVILMDTSWNPANDLQAMFR 53
            MI EFN   NKTARVFL+S +AG  GINL+ ANRVI++DTSWNP+ND Q +FR
Sbjct: 1616 MINEFNNVENKTARVFLISAKAGGQGINLIGANRVIILDTSWNPSNDQQNIFR 1668          
BLAST of mRNA_H-elongata_contig138898.2711.1 vs. uniprot
Match: A0A1I8PAA2_STOCA (Uncharacterized protein n=2 Tax=Stomoxys calcitrans TaxID=35570 RepID=A0A1I8PAA2_STOCA)

HSP 1 Score: 77.4 bits (189), Expect = 2.690e-15
Identity = 36/53 (67.92%), Postives = 43/53 (81.13%), Query Frame = 0
Query:    1 MIEEFNRRRNKTARVFLLSTRAGNMGINLVAANRVILMDTSWNPANDLQAMFR 53
            MI EFN   NKTARVFL+S +AG  GINL+ ANRVI++DTSWNP+ND Q +FR
Sbjct: 1670 MINEFNNVLNKTARVFLISAKAGGQGINLIGANRVIILDTSWNPSNDQQNIFR 1722          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig138898.2711.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LRW3_ECTSI9.790e-1877.36Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KF11_9PHAE1.830e-1777.36Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S0Z154_9CRYP8.350e-1767.31Hypothetical protein (Fragment) n=1 Tax=Hemiselmis... [more]
A0A1W4UEB2_DROFC1.110e-1666.04transcriptional regulator ATRX homolog n=3 Tax=Dro... [more]
A0A811UH95_CERCA1.700e-1667.92(Mediterranean fruit fly) hypothetical protein n=2... [more]
B4G7A9_DROPE1.190e-1566.04GL18989 n=1 Tax=Drosophila persimilis TaxID=7234 R... [more]
A0A8B7L5P5_DROEL1.280e-1564.15transcriptional regulator ATRX homolog n=4 Tax=mel... [more]
A0A0L0BQA0_LUCCU1.440e-1567.92Putative transcriptional regulator ATRX n=1 Tax=Lu... [more]
UPI001F06C71C1.440e-1567.92transcriptional regulator ATRX-like isoform X1 n=3... [more]
A0A1I8PAA2_STOCA2.690e-1567.92Uncharacterized protein n=2 Tax=Stomoxys calcitran... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001650Helicase, C-terminalPFAMPF00271Helicase_Ccoord: 2..53
e-value: 1.2E-7
score: 32.0
NoneNo IPR availableGENE3D3.40.50.300coord: 1..53
e-value: 2.9E-22
score: 81.1
NoneNo IPR availablePANTHERPTHR45797FAMILY NOT NAMEDcoord: 1..53
NoneNo IPR availablePANTHERPTHR45797:SF1TRANSCRIPTIONAL REGULATOR ATRX HOMOLOGcoord: 1..53
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 2..53

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig138898contigH-elongata_contig138898:569..727 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig138898.2711.1mRNA_H-elongata_contig138898.2711.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig138898 560..727 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig138898.2711.1 ID=prot_H-elongata_contig138898.2711.1|Name=mRNA_H-elongata_contig138898.2711.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=53bp
MIEEFNRRRNKTARVFLLSTRAGNMGINLVAANRVILMDTSWNPANDLQA
MFR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001650Helicase_C
IPR027417P-loop_NTPase