prot_H-elongata_contig13769.2648.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig13769.2648.1
Unique Nameprot_H-elongata_contig13769.2648.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length503
Homology
BLAST of mRNA_H-elongata_contig13769.2648.1 vs. uniprot
Match: D7FQB1_ECTSI (SAM domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQB1_ECTSI)

HSP 1 Score: 422 bits (1085), Expect = 1.920e-138
Identity = 305/573 (53.23%), Postives = 336/573 (58.64%), Query Frame = 0
Query:    1 VIGVPRERTGSTIKDMKHKTGCNMWVDQRALKLTITGPDLASVEHAAKSVDAYVAAAPIKAGAVEAAVTKTLDCPSHLLDVLGDRTTIARIVKETHAQVVVNKKIGRIIVRGDHRSVDLAYASVQAIIHSALHG--GHGLRVNAPENIGSHDGHGG-----------YFS-----------------GPGSTGGVASGSIG----------GGSGSSGSRXXXXXXXXXXXXXXXXGRMHMLPAHGPEFRV--DLSEFRSLRSWQHHXXXXQELQAQLQRHQLRGGDGGGSETDG--------SEIETVSLGSIGARTPVSSTAGSPRAAASYNTSPALSGTASTPGGDWSLFSVGFGLGVAALQEGSSGTS---TPTTARASTRVHFPVGLRALDGGGSGGSGDDSALEASASTEGYAQSQDRGDSEKGEVEKTFPVAEERGSHAPPP-SPASTTSGEASRKIRPMSALAREAFEA-----SDGEENG--------------------EDHADKVVRLGRQLQAMGLGKYCPKFAENEVDLEALGLMNENDLADIGIPKGPRLKILNAVGSR 494
            V+G    + GSTIKDMKHKTGCNMWVDQRALKLTITGPDL SVEHAAKSVDAYVAAAPIKAGAVEAAVTKT++CP  LLD LGDRTTIARIVKETHAQVVVNKKIGRIIVRGDHRSVDLAY SV+A+IH+A+HG  G GLRV+ P++ GS  G GG           YF                   P  +G VA    G          GG+G S                     +H L A  P++R   D +EF  L +WQ   XXX                                SEIETVSLGSIGARTPVSSTAGSPR   SYNTSPALSGTASTP GDWSLFS GFG+G+AALQEG S TS   TPTTAR + RVHFP GLRAL GG    S   +   A     G        D   G                    SPA T  GEASR++  +     +   A     SDGEE                      ED +DKV RLG+ LQ MGLGKYCPKFAENEVDLEALGLM+E+DLADIGIPKGPRLKILNAVG+R
Sbjct:   72 VVGWVIGKNGSTIKDMKHKTGCNMWVDQRALKLTITGPDLPSVEHAAKSVDAYVAAAPIKAGAVEAAVTKTIECPPQLLDDLGDRTTIARIVKETHAQVVVNKKIGRIIVRGDHRSVDLAYESVRAMIHNAVHGSYGLGLRVSTPDSHGSF-GVGGXXXXXXXXXXXYFPDGAMSXXXXXXXXXXMRSPLVSGAVAXXXXGMHHLMLPSTAGGAGGSSHADPD---------------LHHLAA--PDYRHARDTAEFHHLATWQQEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDSEIETVSLGSIGARTPVSSTAGSPRVVGSYNTSPALSGTASTPVGDWSLFSGGFGIGMAALQEGESSTSRSSTPTTARTTPRVHFPEGLRALVGGAGRASAASAGDLAVLKGSGLLSPASAADGNSGXXXXXXXXXXXXXXXXXXXXSPALTAGGEASRRMAGLPVPEAQVLSALEGQTSDGEEXXXXXXXXXXXXXXXXXXXXXXEDISDKVARLGKVLQTMGLGKYCPKFAENEVDLEALGLMSESDLADIGIPKGPRLKILNAVGAR 626          
BLAST of mRNA_H-elongata_contig13769.2648.1 vs. uniprot
Match: A0A835ZGS8_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZGS8_9STRA)

HSP 1 Score: 191 bits (485), Expect = 4.850e-54
Identity = 99/131 (75.57%), Postives = 114/131 (87.02%), Query Frame = 0
Query:    1 VIGVPRERTGSTIKDMKHKTGCNMWVDQRALKLTITGPDLASVEHAAKSVDAYVAAAPIKAGAVEAAVTKTLDCPSHLLDVLGDRTTIARIVKETHAQVVVNKKIGRIIVRGDHRSVDLAYASVQAIIHSA 131
            V+G    ++GSTIKD+K+KTGCNMWVDQRALKLTITGPD+ +VEHAAKSV+AYVAAAPIKAGAVEAAVT++LDCP HLLDVLGDR TIARIVKET AQVVVNKK+ R+IVRG   +V +A   VQAII +A
Sbjct:   61 VVGWVIGKSGSTIKDLKNKTGCNMWVDQRALKLTITGPDVRTVEHAAKSVEAYVAAAPIKAGAVEAAVTRSLDCPPHLLDVLGDRATIARIVKETRAQVVVNKKMARVIVRGGPHAVQMACGKVQAIITAA 191          
BLAST of mRNA_H-elongata_contig13769.2648.1 vs. uniprot
Match: A0A835YT56_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YT56_9STRA)

HSP 1 Score: 185 bits (470), Expect = 2.090e-49
Identity = 94/131 (71.76%), Postives = 112/131 (85.50%), Query Frame = 0
Query:    1 VIGVPRERTGSTIKDMKHKTGCNMWVDQRALKLTITGPDLASVEHAAKSVDAYVAAAPIKAGAVEAAVTKTLDCPSHLLDVLGDRTTIARIVKETHAQVVVNKKIGRIIVRGDHRSVDLAYASVQAIIHSA 131
            V+G    R GSTIKD+K+KTGCNMWVDQRALKLTITGPD+ +VEHAAK V+AYVAAAPIKAGAVEAAVT++L+CP HLLD+LGDR TIARIVKET AQVVVNKK+ R+I+RG+  +V +A   +Q II +A
Sbjct:   76 VVGWVIGRNGSTIKDLKNKTGCNMWVDQRALKLTITGPDVCAVEHAAKCVEAYVAAAPIKAGAVEAAVTRSLECPPHLLDMLGDRATIARIVKETRAQVVVNKKMARVIIRGNAHAVHMACGRIQTIIAAA 206          
BLAST of mRNA_H-elongata_contig13769.2648.1 vs. uniprot
Match: D7FHT5_ECTSI (SAM domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHT5_ECTSI)

HSP 1 Score: 99.0 bits (245), Expect = 3.050e-18
Identity = 62/154 (40.26%), Postives = 92/154 (59.74%), Query Frame = 0
Query:    1 VIGVPRERTGSTIKDMKHKTGCNMWVDQRALKLTITGPDLASVEHAAKSVDAYVAAAPIK---AGAVEAAVTKTLDCPSHLLDVLGDR--TTIARIVKETHAQVVVNKKIGRIIVRGDHRSVDLAYASVQAII---HSALHGGHGLRVNAPENI 146
            V+G    R+G+ IK+MKH++GC MWVDQ+ LKL ITG D+  +  AA  V   ++ AP+    AG  +   +  ++CP HL+ +L  R  +TI RI +E+ A VV+N+K+ ++IV G  +SV L  A ++ +I    SA HG  GL    P N 
Sbjct:   42 VVGWVIGRSGAHIKEMKHRSGCGMWVDQKDLKLYITGADMPRIHAAAALVGDLISKAPVNVNSAGVEDEVTSHMIECPPHLIGLLIGRGGSTIKRIKEESRANVVINQKMMKVIVSGIPQSVRLGVAMIEDVITFGRSAEHGA-GLGGAVPPNF 194          
BLAST of mRNA_H-elongata_contig13769.2648.1 vs. uniprot
Match: A0A835YRS0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRS0_9STRA)

HSP 1 Score: 88.6 bits (218), Expect = 9.050e-15
Identity = 57/150 (38.00%), Postives = 85/150 (56.67%), Query Frame = 0
Query:    1 VIGVPRERTGSTIKDMKHKTGCNMWVDQRALKLTITGPDLASVEHAAKSVDAYVAAAPIK---AGAVEAAVTKTLDCPSHLLDVLGDR--TTIARIVKETHAQVVVNKKI------------------GRIIVRGDHRSVDLAYASVQAI 127
            V+G    R+GS IK+MKH++GC MWVDQ+ LKL ITG D+  +  AA  V   ++ AP+    AG  +  V++ +DCP HL+ +L  R  +TI RI +E+ A VV+N+K+                    +IV G  +SV LA A ++ +
Sbjct:  309 VVGWVIGRSGSHIKEMKHRSGCGMWVDQKDLKLYITGTDMPRIHIAAGMVADLISKAPVNMNAAGVDDEVVSQMIDCPPHLIGLLIGRGGSTIKRIKEESRANVVINQKMMXXXXXXXXXXXXXXXXXXXVIVSGIAQSVRLAVAMIEDV 458          
BLAST of mRNA_H-elongata_contig13769.2648.1 vs. uniprot
Match: A0A836CJQ9_9STRA (SAM domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJQ9_9STRA)

HSP 1 Score: 85.5 bits (210), Expect = 8.250e-14
Identity = 56/162 (34.57%), Postives = 84/162 (51.85%), Query Frame = 0
Query:    1 VIGVPRERTGSTIKDMKHKTGCNMWVDQRALKLTITGPDLASVEHAAKSVDAYVAAAPI---------------------------------KAGAVEAAVTKTLDCPSHLLDVLGDR--TTIARIVKETHAQVVVNKKIGRIIVRGDHRSVDLAYASVQAI 127
            V+G    R+GS IK+MKH++GC MWVDQ+ LKL ITG D+  +  AA  V   ++  P                                   AG  +  V++ +DCP HL+ +L  R  +TI RI +E+ A VV+N+K+ ++IV G  +SV LA A ++ +
Sbjct:  319 VVGWVIGRSGSHIKEMKHRSGCGMWVDQKDLKLYITGTDMPRIHIAAGMVADLISKVPYVPSFKGMYRAYQXXXXXXXXXXXXXXXXXVNVSAAGVEDEVVSQMMDCPPHLIGLLIGRGGSTIKRIKEESRANVVINQKMMKVIVSGIPQSVRLAVAMIEDV 480          
BLAST of mRNA_H-elongata_contig13769.2648.1 vs. uniprot
Match: A0A6H5JET1_9PHAE (SAM domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JET1_9PHAE)

HSP 1 Score: 85.1 bits (209), Expect = 1.060e-13
Identity = 50/127 (39.37%), Postives = 78/127 (61.42%), Query Frame = 0
Query:   16 MKHKTGCNMWVDQRALKLTITGPDLASVEHAAKSVDAYVAAAPIK---AGAVEAAVTKTLDCPSHLLDVLGDR--TTIARIVKETHAQVVVNKKIGRIIVRGDHRSVDLAYASVQAII---HSALHG 134
            ++H++GC MWVDQ+ LKL ITG D+  +  AA  V   ++ AP+    AG  +   +  ++CP HL+ +L  R  +TI RI +E+ A VV+N+K+ ++IV G  +SV L  A ++ +I    SA HG
Sbjct:   59 LRHRSGCGMWVDQKDLKLYITGADMPRIHAAAALVGDLISKAPVNVNSAGVEDEVTSHMIECPPHLIGLLIGRGGSTIKRIKEESRANVVINQKMMKVIVSGIPQSVRLGVAMIEDVITFGRSAEHG 185          
BLAST of mRNA_H-elongata_contig13769.2648.1 vs. uniprot
Match: A0A5E4M4M7_9HEMI (WD40/YVTN repeat-like-containing domain,Sterile alpha motif/pointed domain,Sterile alpha motif n=1 Tax=Cinara cedri TaxID=506608 RepID=A0A5E4M4M7_9HEMI)

HSP 1 Score: 66.6 bits (161), Expect = 4.730e-8
Identity = 38/103 (36.89%), Postives = 60/103 (58.25%), Query Frame = 0
Query:  402 TSGEASRKIRPMSALAREAFEASDGEE---NGEDHADKVVRLGRQLQAMGLGKYCPKFAENEVDLEALGLMNENDLADIGIPKGPRLKILNAVGSRGGLSHTD 501
            ++G   ++ +P SA++ + F+ SD E    NG   A++   +   L A G+G+Y  KF E  VDL+AL ++N+ DL  +G+P GPR K+L AV  +     TD
Sbjct:  367 SAGSLVKRNQPSSAMSWDEFQNSDEENIAVNGRPVAERSA-MYEFLAAAGVGEYVDKFVEQRVDLDALFMLNDQDLVSLGLPLGPRRKLLKAVQEQATKRDTD 468          
BLAST of mRNA_H-elongata_contig13769.2648.1 vs. uniprot
Match: A0A382VC15_9ZZZZ (Uncharacterized protein (Fragment) n=1 Tax=marine metagenome TaxID=408172 RepID=A0A382VC15_9ZZZZ)

HSP 1 Score: 62.4 bits (150), Expect = 1.040e-7
Identity = 26/55 (47.27%), Postives = 39/55 (70.91%), Query Frame = 0
Query:  437 VVRLGRQLQAMGLGKYCPKFAENEVDLEALGLMNENDLADIGIPKGPRLKILNAV 491
             + + + L  +GL KY   FAENE+DL+A+GL++E D  ++G+P GPR K+L AV
Sbjct:    2 AIDIEQWLDNLGLSKYADVFAENEIDLDAVGLLSEEDFKELGLPMGPRRKLLAAV 56          
BLAST of mRNA_H-elongata_contig13769.2648.1 vs. uniprot
Match: A0A813JZV9_POLGL (Hypothetical protein (Fragment) n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813JZV9_POLGL)

HSP 1 Score: 60.8 bits (146), Expect = 1.060e-7
Identity = 26/48 (54.17%), Postives = 35/48 (72.92%), Query Frame = 0
Query:  444 LQAMGLGKYCPKFAENEVDLEALGLMNENDLADIGIPKGPRLKILNAV 491
            +Q +GL ++ P F   EVDL+AL L  E DL D+G+PKGPR+K+L AV
Sbjct:    5 MQQIGLERFIPAFQAEEVDLDALSLFEEKDLQDLGLPKGPRVKLLRAV 52          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig13769.2648.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FQB1_ECTSI1.920e-13853.23SAM domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A835ZGS8_9STRA4.850e-5475.57Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
A0A835YT56_9STRA2.090e-4971.76Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
D7FHT5_ECTSI3.050e-1840.26SAM domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A835YRS0_9STRA9.050e-1538.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CJQ9_9STRA8.250e-1434.57SAM domain-containing protein n=1 Tax=Tribonema mi... [more]
A0A6H5JET1_9PHAE1.060e-1339.37SAM domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A5E4M4M7_9HEMI4.730e-836.89WD40/YVTN repeat-like-containing domain,Sterile al... [more]
A0A382VC15_9ZZZZ1.040e-747.27Uncharacterized protein (Fragment) n=1 Tax=marine ... [more]
A0A813JZV9_POLGL1.060e-754.17Hypothetical protein (Fragment) n=1 Tax=Polarella ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001660Sterile alpha motif domainSMARTSM00454SAM_4coord: 432..497
e-value: 4.4E-6
score: 36.2
IPR001660Sterile alpha motif domainPFAMPF00536SAM_1coord: 444..491
e-value: 3.0E-11
score: 43.6
IPR001660Sterile alpha motif domainPROSITEPS50105SAM_DOMAINcoord: 444..479
score: 9.049
IPR013761Sterile alpha motif/pointed domain superfamilyGENE3D1.10.150.50coord: 431..498
e-value: 5.1E-16
score: 60.2
IPR013761Sterile alpha motif/pointed domain superfamilySUPERFAMILY47769SAM/Pointed domaincoord: 441..491
NoneNo IPR availablePANTHERPTHR24161:SF43LD20463Pcoord: 399..494
NoneNo IPR availablePANTHERPTHR24161FAMILY NOT NAMEDcoord: 399..494
IPR036612K Homology domain, type 1 superfamilySUPERFAMILY54791Eukaryotic type KH-domain (KH-domain type I)coord: 9..56

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig13769contigH-elongata_contig13769:922..2430 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig13769.2648.1mRNA_H-elongata_contig13769.2648.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig13769 922..2430 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig13769.2648.1 ID=prot_H-elongata_contig13769.2648.1|Name=mRNA_H-elongata_contig13769.2648.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=503bp
VIGVPRERTGSTIKDMKHKTGCNMWVDQRALKLTITGPDLASVEHAAKSV
DAYVAAAPIKAGAVEAAVTKTLDCPSHLLDVLGDRTTIARIVKETHAQVV
VNKKIGRIIVRGDHRSVDLAYASVQAIIHSALHGGHGLRVNAPENIGSHD
GHGGYFSGPGSTGGVASGSIGGGSGSSGSRPPGVGSPVDGMAGGGSGRMH
MLPAHGPEFRVDLSEFRSLRSWQHHQHHQQELQAQLQRHQLRGGDGGGSE
TDGSEIETVSLGSIGARTPVSSTAGSPRAAASYNTSPALSGTASTPGGDW
SLFSVGFGLGVAALQEGSSGTSTPTTARASTRVHFPVGLRALDGGGSGGS
GDDSALEASASTEGYAQSQDRGDSEKGEVEKTFPVAEERGSHAPPPSPAS
TTSGEASRKIRPMSALAREAFEASDGEENGEDHADKVVRLGRQLQAMGLG
KYCPKFAENEVDLEALGLMNENDLADIGIPKGPRLKILNAVGSRGGLSHT
DL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001660SAM
IPR013761SAM/pointed_sf
IPR036612KH_dom_type_1_sf