mRNA_H-elongata_contig13769.2648.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig13769.2648.1
Unique NamemRNA_H-elongata_contig13769.2648.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
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BLAST of mRNA_H-elongata_contig13769.2648.1 vs. uniprot
Match: D7FQB1_ECTSI (SAM domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQB1_ECTSI)

HSP 1 Score: 422 bits (1085), Expect = 1.920e-138
Identity = 305/573 (53.23%), Postives = 336/573 (58.64%), Query Frame = 1 
Query:    1 VIGVPRERTGSTIKDMKHKTGCNMWVDQRALKLTITGPDLASVEHAAKSVDAYVAAAPIKAGAVEAAVTKTLDCPSHLLDVLGDRTTIARIVKETHAQVVVNKKIGRIIVRGDHRSVDLAYASVQAIIHSALHG--GHGLRVNAPENIGSHDGHGG-----------YFS-----------------GPGSTGGVASGSIG----------GGSGSSGSRXXXXXXXXXXXXXXXXGRMHMLPAHGPEFRV--DLSEFRSLRSWQHHXXXXQELQAQLQRHQLRGGDGGGSETDG--------SEIETVSLGSIGARTPVSSTAGSPRAAASYNTSPALSGTASTPGGDWSLFSVGFGLGVAALQEGSSGTS---TPTTARASTRVHFPVGLRALDGGGSGGSGDDSALEASASTEGYAQSQDRGDSEKGEVEKTFPVAEERGSHAPPP-SPASTTSGEASRKIRPMSALAREAFEA-----SDGEENG--------------------EDHADKVVRLGRQLQAMGLGKYCPKFAENEVDLEALGLMNENDLADIGIPKGPRLKILNAVGSR 1482
            V+G    + GSTIKDMKHKTGCNMWVDQRALKLTITGPDL SVEHAAKSVDAYVAAAPIKAGAVEAAVTKT++CP  LLD LGDRTTIARIVKETHAQVVVNKKIGRIIVRGDHRSVDLAY SV+A+IH+A+HG  G GLRV+ P++ GS  G GG           YF                   P  +G VA    G          GG+G S                     +H L A  P++R   D +EF  L +WQ   XXX                                SEIETVSLGSIGARTPVSSTAGSPR   SYNTSPALSGTASTP GDWSLFS GFG+G+AALQEG S TS   TPTTAR + RVHFP GLRAL GG    S   +   A     G        D   G                    SPA T  GEASR++  +     +   A     SDGEE                      ED +DKV RLG+ LQ MGLGKYCPKFAENEVDLEALGLM+E+DLADIGIPKGPRLKILNAVG+R
Sbjct:   72 VVGWVIGKNGSTIKDMKHKTGCNMWVDQRALKLTITGPDLPSVEHAAKSVDAYVAAAPIKAGAVEAAVTKTIECPPQLLDDLGDRTTIARIVKETHAQVVVNKKIGRIIVRGDHRSVDLAYESVRAMIHNAVHGSYGLGLRVSTPDSHGSF-GVGGXXXXXXXXXXXYFPDGAMSXXXXXXXXXXMRSPLVSGAVAXXXXGMHHLMLPSTAGGAGGSSHADPD---------------LHHLAA--PDYRHARDTAEFHHLATWQQEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDSEIETVSLGSIGARTPVSSTAGSPRVVGSYNTSPALSGTASTPVGDWSLFSGGFGIGMAALQEGESSTSRSSTPTTARTTPRVHFPEGLRALVGGAGRASAASAGDLAVLKGSGLLSPASAADGNSGXXXXXXXXXXXXXXXXXXXXSPALTAGGEASRRMAGLPVPEAQVLSALEGQTSDGEEXXXXXXXXXXXXXXXXXXXXXXEDISDKVARLGKVLQTMGLGKYCPKFAENEVDLEALGLMSESDLADIGIPKGPRLKILNAVGAR 626
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BLAST of mRNA_H-elongata_contig13769.2648.1 vs. uniprot
Match: A0A835ZGS8_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZGS8_9STRA)

HSP 1 Score: 191 bits (485), Expect = 4.850e-54
Identity = 99/131 (75.57%), Postives = 114/131 (87.02%), Query Frame = 1 
Query:    1 VIGVPRERTGSTIKDMKHKTGCNMWVDQRALKLTITGPDLASVEHAAKSVDAYVAAAPIKAGAVEAAVTKTLDCPSHLLDVLGDRTTIARIVKETHAQVVVNKKIGRIIVRGDHRSVDLAYASVQAIIHSA 393
            V+G    ++GSTIKD+K+KTGCNMWVDQRALKLTITGPD+ +VEHAAKSV+AYVAAAPIKAGAVEAAVT++LDCP HLLDVLGDR TIARIVKET AQVVVNKK+ R+IVRG   +V +A   VQAII +A
Sbjct:   61 VVGWVIGKSGSTIKDLKNKTGCNMWVDQRALKLTITGPDVRTVEHAAKSVEAYVAAAPIKAGAVEAAVTRSLDCPPHLLDVLGDRATIARIVKETRAQVVVNKKMARVIVRGGPHAVQMACGKVQAIITAA 191
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BLAST of mRNA_H-elongata_contig13769.2648.1 vs. uniprot
Match: A0A835YT56_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YT56_9STRA)

HSP 1 Score: 185 bits (470), Expect = 2.090e-49
Identity = 94/131 (71.76%), Postives = 112/131 (85.50%), Query Frame = 1 
Query:    1 VIGVPRERTGSTIKDMKHKTGCNMWVDQRALKLTITGPDLASVEHAAKSVDAYVAAAPIKAGAVEAAVTKTLDCPSHLLDVLGDRTTIARIVKETHAQVVVNKKIGRIIVRGDHRSVDLAYASVQAIIHSA 393
            V+G    R GSTIKD+K+KTGCNMWVDQRALKLTITGPD+ +VEHAAK V+AYVAAAPIKAGAVEAAVT++L+CP HLLD+LGDR TIARIVKET AQVVVNKK+ R+I+RG+  +V +A   +Q II +A
Sbjct:   76 VVGWVIGRNGSTIKDLKNKTGCNMWVDQRALKLTITGPDVCAVEHAAKCVEAYVAAAPIKAGAVEAAVTRSLECPPHLLDMLGDRATIARIVKETRAQVVVNKKMARVIIRGNAHAVHMACGRIQTIIAAA 206
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BLAST of mRNA_H-elongata_contig13769.2648.1 vs. uniprot
Match: D7FHT5_ECTSI (SAM domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHT5_ECTSI)

HSP 1 Score: 99.0 bits (245), Expect = 3.050e-18
Identity = 62/154 (40.26%), Postives = 92/154 (59.74%), Query Frame = 1 
Query:    1 VIGVPRERTGSTIKDMKHKTGCNMWVDQRALKLTITGPDLASVEHAAKSVDAYVAAAPIK---AGAVEAAVTKTLDCPSHLLDVLGDR--TTIARIVKETHAQVVVNKKIGRIIVRGDHRSVDLAYASVQAII---HSALHGGHGLRVNAPENI 438
            V+G    R+G+ IK+MKH++GC MWVDQ+ LKL ITG D+  +  AA  V   ++ AP+    AG  +   +  ++CP HL+ +L  R  +TI RI +E+ A VV+N+K+ ++IV G  +SV L  A ++ +I    SA HG  GL    P N 
Sbjct:   42 VVGWVIGRSGAHIKEMKHRSGCGMWVDQKDLKLYITGADMPRIHAAAALVGDLISKAPVNVNSAGVEDEVTSHMIECPPHLIGLLIGRGGSTIKRIKEESRANVVINQKMMKVIVSGIPQSVRLGVAMIEDVITFGRSAEHGA-GLGGAVPPNF 194
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BLAST of mRNA_H-elongata_contig13769.2648.1 vs. uniprot
Match: A0A835YRS0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRS0_9STRA)

HSP 1 Score: 88.6 bits (218), Expect = 9.050e-15
Identity = 57/150 (38.00%), Postives = 85/150 (56.67%), Query Frame = 1 
Query:    1 VIGVPRERTGSTIKDMKHKTGCNMWVDQRALKLTITGPDLASVEHAAKSVDAYVAAAPIK---AGAVEAAVTKTLDCPSHLLDVLGDR--TTIARIVKETHAQVVVNKKI------------------GRIIVRGDHRSVDLAYASVQAI 381
            V+G    R+GS IK+MKH++GC MWVDQ+ LKL ITG D+  +  AA  V   ++ AP+    AG  +  V++ +DCP HL+ +L  R  +TI RI +E+ A VV+N+K+                    +IV G  +SV LA A ++ +
Sbjct:  309 VVGWVIGRSGSHIKEMKHRSGCGMWVDQKDLKLYITGTDMPRIHIAAGMVADLISKAPVNMNAAGVDDEVVSQMIDCPPHLIGLLIGRGGSTIKRIKEESRANVVINQKMMXXXXXXXXXXXXXXXXXXXVIVSGIAQSVRLAVAMIEDV 458
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BLAST of mRNA_H-elongata_contig13769.2648.1 vs. uniprot
Match: A0A836CJQ9_9STRA (SAM domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJQ9_9STRA)

HSP 1 Score: 85.5 bits (210), Expect = 8.250e-14
Identity = 56/162 (34.57%), Postives = 84/162 (51.85%), Query Frame = 1 
Query:    1 VIGVPRERTGSTIKDMKHKTGCNMWVDQRALKLTITGPDLASVEHAAKSVDAYVAAAPI---------------------------------KAGAVEAAVTKTLDCPSHLLDVLGDR--TTIARIVKETHAQVVVNKKIGRIIVRGDHRSVDLAYASVQAI 381
            V+G    R+GS IK+MKH++GC MWVDQ+ LKL ITG D+  +  AA  V   ++  P                                   AG  +  V++ +DCP HL+ +L  R  +TI RI +E+ A VV+N+K+ ++IV G  +SV LA A ++ +
Sbjct:  319 VVGWVIGRSGSHIKEMKHRSGCGMWVDQKDLKLYITGTDMPRIHIAAGMVADLISKVPYVPSFKGMYRAYQXXXXXXXXXXXXXXXXXVNVSAAGVEDEVVSQMMDCPPHLIGLLIGRGGSTIKRIKEESRANVVINQKMMKVIVSGIPQSVRLAVAMIEDV 480
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BLAST of mRNA_H-elongata_contig13769.2648.1 vs. uniprot
Match: A0A6H5JET1_9PHAE (SAM domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JET1_9PHAE)

HSP 1 Score: 85.1 bits (209), Expect = 1.060e-13
Identity = 50/127 (39.37%), Postives = 78/127 (61.42%), Query Frame = 1 
Query:   46 MKHKTGCNMWVDQRALKLTITGPDLASVEHAAKSVDAYVAAAPIK---AGAVEAAVTKTLDCPSHLLDVLGDR--TTIARIVKETHAQVVVNKKIGRIIVRGDHRSVDLAYASVQAII---HSALHG 402
            ++H++GC MWVDQ+ LKL ITG D+  +  AA  V   ++ AP+    AG  +   +  ++CP HL+ +L  R  +TI RI +E+ A VV+N+K+ ++IV G  +SV L  A ++ +I    SA HG
Sbjct:   59 LRHRSGCGMWVDQKDLKLYITGADMPRIHAAAALVGDLISKAPVNVNSAGVEDEVTSHMIECPPHLIGLLIGRGGSTIKRIKEESRANVVINQKMMKVIVSGIPQSVRLGVAMIEDVITFGRSAEHG 185
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BLAST of mRNA_H-elongata_contig13769.2648.1 vs. uniprot
Match: A0A5E4M4M7_9HEMI (WD40/YVTN repeat-like-containing domain,Sterile alpha motif/pointed domain,Sterile alpha motif n=1 Tax=Cinara cedri TaxID=506608 RepID=A0A5E4M4M7_9HEMI)

HSP 1 Score: 66.6 bits (161), Expect = 4.730e-8
Identity = 38/103 (36.89%), Postives = 60/103 (58.25%), Query Frame = 1 
Query: 1204 TSGEASRKIRPMSALAREAFEASDGEE---NGEDHADKVVRLGRQLQAMGLGKYCPKFAENEVDLEALGLMNENDLADIGIPKGPRLKILNAVGSRGGLSHTD 1503
            ++G   ++ +P SA++ + F+ SD E    NG   A++   +   L A G+G+Y  KF E  VDL+AL ++N+ DL  +G+P GPR K+L AV  +     TD
Sbjct:  367 SAGSLVKRNQPSSAMSWDEFQNSDEENIAVNGRPVAERSA-MYEFLAAAGVGEYVDKFVEQRVDLDALFMLNDQDLVSLGLPLGPRRKLLKAVQEQATKRDTD 468
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BLAST of mRNA_H-elongata_contig13769.2648.1 vs. uniprot
Match: A0A382VC15_9ZZZZ (Uncharacterized protein (Fragment) n=1 Tax=marine metagenome TaxID=408172 RepID=A0A382VC15_9ZZZZ)

HSP 1 Score: 62.4 bits (150), Expect = 1.040e-7
Identity = 26/55 (47.27%), Postives = 39/55 (70.91%), Query Frame = 1 
Query: 1309 VVRLGRQLQAMGLGKYCPKFAENEVDLEALGLMNENDLADIGIPKGPRLKILNAV 1473
             + + + L  +GL KY   FAENE+DL+A+GL++E D  ++G+P GPR K+L AV
Sbjct:    2 AIDIEQWLDNLGLSKYADVFAENEIDLDAVGLLSEEDFKELGLPMGPRRKLLAAV 56
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BLAST of mRNA_H-elongata_contig13769.2648.1 vs. uniprot
Match: A0A813JZV9_POLGL (Hypothetical protein (Fragment) n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813JZV9_POLGL)

HSP 1 Score: 60.8 bits (146), Expect = 1.060e-7
Identity = 26/48 (54.17%), Postives = 35/48 (72.92%), Query Frame = 1 
Query: 1330 LQAMGLGKYCPKFAENEVDLEALGLMNENDLADIGIPKGPRLKILNAV 1473
            +Q +GL ++ P F   EVDL+AL L  E DL D+G+PKGPR+K+L AV
Sbjct:    5 MQQIGLERFIPAFQAEEVDLDALSLFEEKDLQDLGLPKGPRVKLLRAV 52
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig13769.2648.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FQB1_ECTSI1.920e-13853.23SAM domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A835ZGS8_9STRA4.850e-5475.57Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
A0A835YT56_9STRA2.090e-4971.76Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
D7FHT5_ECTSI3.050e-1840.26SAM domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A835YRS0_9STRA9.050e-1538.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CJQ9_9STRA8.250e-1434.57SAM domain-containing protein n=1 Tax=Tribonema mi... [more]
A0A6H5JET1_9PHAE1.060e-1339.37SAM domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A5E4M4M7_9HEMI4.730e-836.89WD40/YVTN repeat-like-containing domain,Sterile al... [more]
A0A382VC15_9ZZZZ1.040e-747.27Uncharacterized protein (Fragment) n=1 Tax=marine ... [more]
A0A813JZV9_POLGL1.060e-754.17Hypothetical protein (Fragment) n=1 Tax=Polarella ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig13769contigH-elongata_contig13769:922..2430 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeMetazoa
Seed ortholog score65.1
Seed ortholog evalue1.1e-07
Seed eggNOG ortholog400682.PAC_15712215
Preferred nameANKRD17
KEGG koko:K16726
GOsGO:0000785,GO:0001568,GO:0001654,GO:0001745,GO:0001751,GO:0001754,GO:0001817,GO:0001819,GO:0001944,GO:0001955,GO:0002376,GO:0002682,GO:0002684,GO:0002697,GO:0002699,GO:0002831,GO:0002833,GO:0003674,GO:0003682,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005635,GO:0005694,GO:0005737,GO:0006275,GO:0006950,GO:0006952,GO:0006955,GO:0006959,GO:0006996,GO:0007005,GO:0007010,GO:0007154,GO:0007165,GO:0007166,GO:0007167,GO:0007169,GO:0007275,GO:0007346,GO:0007399,GO:0007423,GO:0007492,GO:0008150,GO:0009605,GO:0009607,GO:0009617,GO:0009653,GO:0009887,GO:0009888,GO:0009889,GO:0009892,GO:0009894,GO:0009895,GO:0009966,GO:0009967,GO:0009987,GO:0010506,GO:0010507,GO:0010556,GO:0010564,GO:0010639,GO:0010646,GO:0010647,GO:0010821,GO:0010823,GO:0010927,GO:0010941,GO:0012505,GO:0016020,GO:0016043,GO:0019219,GO:0019222,GO:0019730,GO:0019899,GO:0019900,GO:0019901,GO:0021700,GO:0022008,GO:0022607,GO:0023051,GO:0023052,GO:0023056,GO:0030016,GO:0030017,GO:0030018,GO:0030029,GO:0030036,GO:0030154,GO:0030182,GO:0030239,GO:0031032,GO:0031090,GO:0031323,GO:0031324,GO:0031326,GO:0031329,GO:0031330,GO:0031347,GO:0031349,GO:0031430,GO:0031672,GO:0031674,GO:0031965,GO:0031967,GO:0031975,GO:0032101,GO:0032103,GO:0032501,GO:0032502,GO:0032989,GO:0033043,GO:0039531,GO:0039533,GO:0039535,GO:0040011,GO:0042692,GO:0042742,GO:0042981,GO:0043066,GO:0043067,GO:0043069,GO:0043122,GO:0043123,GO:0043207,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043292,GO:0043900,GO:0043902,GO:0044085,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044444,GO:0044446,GO:0044449,GO:0044464,GO:0045087,GO:0045088,GO:0045089,GO:0045214,GO:0045595,GO:0045596,GO:0045787,GO:0045931,GO:0046530,GO:0048468,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048584,GO:0048592,GO:0048646,GO:0048699,GO:0048731,GO:0048749,GO:0048856,GO:0048869,GO:0050688,GO:0050776,GO:0050778,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051052,GO:0051093,GO:0051128,GO:0051129,GO:0051146,GO:0051147,GO:0051148,GO:0051150,GO:0051151,GO:0051171,GO:0051239,GO:0051240,GO:0051704,GO:0051707,GO:0051716,GO:0051726,GO:0055001,GO:0055002,GO:0060255,GO:0060361,GO:0060548,GO:0061061,GO:0065007,GO:0070925,GO:0071695,GO:0071840,GO:0072358,GO:0072359,GO:0080090,GO:0080134,GO:0090068,GO:0090596,GO:0097435,GO:0098542,GO:0099080,GO:0099081,GO:0099512,GO:1900087,GO:1900245,GO:1900246,GO:1901987,GO:1901989,GO:1901990,GO:1901992,GO:1902531,GO:1902533,GO:1902806,GO:1902808,GO:1903146,GO:1903147,GO:2000045,GO:2000112
EggNOG free text desc.positive regulation of MDA-5 signaling pathway
EggNOG OGs38I05@33154,3BHRH@33208,COG0666@1,KOG0504@2759,KOG4369@1,KOG4369@2759
COG Functional cat.T
Best tax levelMetazoa
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03036
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionK Homology domain
Ec32 orthologEc-01_006780.1
Exons1
Model size1509
Cds size1509
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929818.000668-CDS-H-elongata_contig13769:921..24301622929818.000668-CDS-H-elongata_contig13769:921..2430Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig13769 922..2430 +
1691679169.362582-CDS-H-elongata_contig13769:921..24301691679169.362582-CDS-H-elongata_contig13769:921..2430Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig13769 922..2430 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig13769.2648.1prot_H-elongata_contig13769.2648.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig13769 922..2430 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig13769.2648.1

>prot_H-elongata_contig13769.2648.1 ID=prot_H-elongata_contig13769.2648.1|Name=mRNA_H-elongata_contig13769.2648.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=503bp
VIGVPRERTGSTIKDMKHKTGCNMWVDQRALKLTITGPDLASVEHAAKSV
DAYVAAAPIKAGAVEAAVTKTLDCPSHLLDVLGDRTTIARIVKETHAQVV
VNKKIGRIIVRGDHRSVDLAYASVQAIIHSALHGGHGLRVNAPENIGSHD
GHGGYFSGPGSTGGVASGSIGGGSGSSGSRPPGVGSPVDGMAGGGSGRMH
MLPAHGPEFRVDLSEFRSLRSWQHHQHHQQELQAQLQRHQLRGGDGGGSE
TDGSEIETVSLGSIGARTPVSSTAGSPRAAASYNTSPALSGTASTPGGDW
SLFSVGFGLGVAALQEGSSGTSTPTTARASTRVHFPVGLRALDGGGSGGS
GDDSALEASASTEGYAQSQDRGDSEKGEVEKTFPVAEERGSHAPPPSPAS
TTSGEASRKIRPMSALAREAFEASDGEENGEDHADKVVRLGRQLQAMGLG
KYCPKFAENEVDLEALGLMNENDLADIGIPKGPRLKILNAVGSRGGLSHT
DL*
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mRNA from alignment at H-elongata_contig13769:922..2430+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig13769.2648.1 ID=mRNA_H-elongata_contig13769.2648.1|Name=mRNA_H-elongata_contig13769.2648.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1509bp|location=Sequence derived from alignment at H-elongata_contig13769:922..2430+ (Himanthalia elongata Himel1 dioecious)
GTCATTGGCGTGCCCCGCGAACGCACAGGTAGCACGATCAAAGACATGAA
GCACAAGACTGGCTGTAACATGTGGGTGGACCAGCGGGCTCTCAAGCTCA
CGATCACGGGTCCCGACCTGGCTTCCGTCGAGCACGCCGCCAAGTCCGTC
GATGCGTACGTCGCGGCCGCGCCAATCAAGGCCGGGGCGGTCGAGGCAGC
GGTCACGAAGACCCTAGATTGCCCTTCCCACCTCCTCGATGTTCTCGGAG
ACAGGACGACGATCGCGCGCATCGTTAAGGAGACGCACGCGCAGGTGGTC
GTGAACAAGAAGATCGGCCGCATCATCGTGCGCGGTGATCACCGTTCCGT
AGATCTCGCCTATGCCAGCGTCCAGGCCATAATTCACTCCGCGCTCCACG
GCGGACACGGGCTTCGGGTGAACGCGCCTGAAAATATTGGTTCGCACGAC
GGACACGGCGGCTACTTTTCCGGCCCCGGCTCCACGGGTGGTGTGGCAAG
TGGCAGCATCGGAGGCGGAAGTGGAAGCAGTGGCTCGCGCCCACCGGGCG
TTGGGTCTCCGGTGGATGGAATGGCGGGTGGAGGATCGGGGCGTATGCAC
ATGCTGCCCGCCCACGGACCTGAATTCCGTGTGGATCTATCTGAGTTCCG
GAGCTTGAGGTCCTGGCAGCACCACCAGCACCATCAGCAGGAGCTCCAAG
CACAGCTCCAGCGACACCAGCTCAGGGGCGGAGATGGAGGGGGCTCGGAG
ACGGATGGTTCGGAGATCGAGACAGTATCCCTCGGGTCGATCGGCGCTCG
AACTCCGGTCAGTTCGACGGCCGGGTCCCCGCGCGCGGCGGCCTCGTACA
ACACCAGTCCGGCGCTTTCCGGCACGGCCTCTACTCCCGGTGGGGACTGG
TCACTCTTCTCGGTAGGCTTTGGACTCGGGGTTGCGGCGCTGCAGGAGGG
GTCTTCGGGTACCAGCACACCCACCACCGCAAGGGCTTCGACGCGGGTCC
ACTTTCCGGTTGGTCTTCGGGCCCTTGATGGTGGCGGTAGCGGAGGTAGC
GGCGATGATTCCGCGCTCGAGGCTTCGGCATCAACGGAGGGTTATGCGCA
GAGCCAAGACCGCGGCGACAGCGAGAAAGGCGAGGTAGAGAAAACATTCC
CGGTCGCCGAGGAGCGGGGTTCACACGCCCCGCCCCCGTCGCCGGCTTCC
ACGACGAGTGGCGAGGCGTCGCGCAAGATACGACCGATGTCAGCATTGGC
GCGCGAAGCGTTCGAAGCGTCAGACGGTGAGGAGAATGGCGAGGATCACG
CAGACAAGGTCGTACGACTGGGCAGGCAGTTGCAGGCCATGGGGCTCGGT
AAGTACTGCCCCAAGTTCGCGGAGAACGAGGTCGACCTCGAGGCGCTCGG
GCTCATGAACGAAAACGACCTCGCCGACATTGGGATCCCCAAGGGCCCCA
GGCTAAAGATCCTTAACGCCGTCGGCAGCCGCGGCGGTCTTAGCCACACC
GACCTCTGA
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Coding sequence (CDS) from alignment at H-elongata_contig13769:922..2430+

>mRNA_H-elongata_contig13769.2648.1 ID=mRNA_H-elongata_contig13769.2648.1|Name=mRNA_H-elongata_contig13769.2648.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=3018bp|location=Sequence derived from alignment at H-elongata_contig13769:922..2430+ (Himanthalia elongata Himel1 dioecious)
GTCATTGGCGTGCCCCGCGAACGCACAGGTAGCACGATCAAAGACATGAA
GCACAAGACTGGCTGTAACATGTGGGTGGACCAGCGGGCTCTCAAGCTCA
CGATCACGGGTCCCGACCTGGCTTCCGTCGAGCACGCCGCCAAGTCCGTC
GATGCGTACGTCGCGGCCGCGCCAATCAAGGCCGGGGCGGTCGAGGCAGC
GGTCACGAAGACCCTAGATTGCCCTTCCCACCTCCTCGATGTTCTCGGAG
ACAGGACGACGATCGCGCGCATCGTTAAGGAGACGCACGCGCAGGTGGTC
GTGAACAAGAAGATCGGCCGCATCATCGTGCGCGGTGATCACCGTTCCGT
AGATCTCGCCTATGCCAGCGTCCAGGCCATAATTCACTCCGCGCTCCACG
GCGGACACGGGCTTCGGGTGAACGCGCCTGAAAATATTGGTTCGCACGAC
GGACACGGCGGCTACTTTTCCGGCCCCGGCTCCACGGGTGGTGTGGCAAG
TGGCAGCATCGGAGGCGGAAGTGGAAGCAGTGGCTCGCGCCCACCGGGCG
TTGGGTCTCCGGTGGATGGAATGGCGGGTGGAGGATCGGGGCGTATGCAC
ATGCTGCCCGCCCACGGACCTGAATTCCGTGTGGATCTATCTGAGTTCCG
GAGCTTGAGGTCCTGGCAGCACCACCAGCACCATCAGCAGGAGCTCCAAG
CACAGCTCCAGCGACACCAGCTCAGGGGCGGAGATGGAGGGGGCTCGGAG
ACGGATGGTTCGGAGATCGAGACAGTATCCCTCGGGTCGATCGGCGCTCG
AACTCCGGTCAGTTCGACGGCCGGGTCCCCGCGCGCGGCGGCCTCGTACA
ACACCAGTCCGGCGCTTTCCGGCACGGCCTCTACTCCCGGTGGGGACTGG
TCACTCTTCTCGGTAGGCTTTGGACTCGGGGTTGCGGCGCTGCAGGAGGG
GTCTTCGGGTACCAGCACACCCACCACCGCAAGGGCTTCGACGCGGGTCC
ACTTTCCGGTTGGTCTTCGGGCCCTTGATGGTGGCGGTAGCGGAGGTAGC
GGCGATGATTCCGCGCTCGAGGCTTCGGCATCAACGGAGGGTTATGCGCA
GAGCCAAGACCGCGGCGACAGCGAGAAAGGCGAGGTAGAGAAAACATTCC
CGGTCGCCGAGGAGCGGGGTTCACACGCCCCGCCCCCGTCGCCGGCTTCC
ACGACGAGTGGCGAGGCGTCGCGCAAGATACGACCGATGTCAGCATTGGC
GCGCGAAGCGTTCGAAGCGTCAGACGGTGAGGAGAATGGCGAGGATCACG
CAGACAAGGTCGTACGACTGGGCAGGCAGTTGCAGGCCATGGGGCTCGGT
AAGTACTGCCCCAAGTTCGCGGAGAACGAGGTCGACCTCGAGGCGCTCGG
GCTCATGAACGAAAACGACCTCGCCGACATTGGGATCCCCAAGGGCCCCA
GGCTAAAGATCCTTAACGCCGTCGGCAGCCGCGGCGGTCTTAGCCACACC
GACCTCTGAGTCATTGGCGTGCCCCGCGAACGCACAGGTAGCACGATCAA
AGACATGAAGCACAAGACTGGCTGTAACATGTGGGTGGACCAGCGGGCTC
TCAAGCTCACGATCACGGGTCCCGACCTGGCTTCCGTCGAGCACGCCGCC
AAGTCCGTCGATGCGTACGTCGCGGCCGCGCCAATCAAGGCCGGGGCGGT
CGAGGCAGCGGTCACGAAGACCCTAGATTGCCCTTCCCACCTCCTCGATG
TTCTCGGAGACAGGACGACGATCGCGCGCATCGTTAAGGAGACGCACGCG
CAGGTGGTCGTGAACAAGAAGATCGGCCGCATCATCGTGCGCGGTGATCA
CCGTTCCGTAGATCTCGCCTATGCCAGCGTCCAGGCCATAATTCACTCCG
CGCTCCACGGCGGACACGGGCTTCGGGTGAACGCGCCTGAAAATATTGGT
TCGCACGACGGACACGGCGGCTACTTTTCCGGCCCCGGCTCCACGGGTGG
TGTGGCAAGTGGCAGCATCGGAGGCGGAAGTGGAAGCAGTGGCTCGCGCC
CACCGGGCGTTGGGTCTCCGGTGGATGGAATGGCGGGTGGAGGATCGGGG
CGTATGCACATGCTGCCCGCCCACGGACCTGAATTCCGTGTGGATCTATC
TGAGTTCCGGAGCTTGAGGTCCTGGCAGCACCACCAGCACCATCAGCAGG
AGCTCCAAGCACAGCTCCAGCGACACCAGCTCAGGGGCGGAGATGGAGGG
GGCTCGGAGACGGATGGTTCGGAGATCGAGACAGTATCCCTCGGGTCGAT
CGGCGCTCGAACTCCGGTCAGTTCGACGGCCGGGTCCCCGCGCGCGGCGG
CCTCGTACAACACCAGTCCGGCGCTTTCCGGCACGGCCTCTACTCCCGGT
GGGGACTGGTCACTCTTCTCGGTAGGCTTTGGACTCGGGGTTGCGGCGCT
GCAGGAGGGGTCTTCGGGTACCAGCACACCCACCACCGCAAGGGCTTCGA
CGCGGGTCCACTTTCCGGTTGGTCTTCGGGCCCTTGATGGTGGCGGTAGC
GGAGGTAGCGGCGATGATTCCGCGCTCGAGGCTTCGGCATCAACGGAGGG
TTATGCGCAGAGCCAAGACCGCGGCGACAGCGAGAAAGGCGAGGTAGAGA
AAACATTCCCGGTCGCCGAGGAGCGGGGTTCACACGCCCCGCCCCCGTCG
CCGGCTTCCACGACGAGTGGCGAGGCGTCGCGCAAGATACGACCGATGTC
AGCATTGGCGCGCGAAGCGTTCGAAGCGTCAGACGGTGAGGAGAATGGCG
AGGATCACGCAGACAAGGTCGTACGACTGGGCAGGCAGTTGCAGGCCATG
GGGCTCGGTAAGTACTGCCCCAAGTTCGCGGAGAACGAGGTCGACCTCGA
GGCGCTCGGGCTCATGAACGAAAACGACCTCGCCGACATTGGGATCCCCA
AGGGCCCCAGGCTAAAGATCCTTAACGCCGTCGGCAGCCGCGGCGGTCTT
AGCCACACCGACCTCTGA
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