prot_H-elongata_contig136438.2569.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig136438.2569.1
Unique Nameprot_H-elongata_contig136438.2569.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length73
Homology
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BLAST of mRNA_H-elongata_contig136438.2569.1 vs. uniprot
Match: A0A7N2LHA8_QUELO (DUF659 domain-containing protein n=4 Tax=Quercus lobata TaxID=97700 RepID=A0A7N2LHA8_QUELO)

HSP 1 Score: 53.1 bits (126), Expect = 2.150e-6
Identity = 23/57 (40.35%), Postives = 37/57 (64.91%), Query Frame = 0 
Query:   15 LQRGKTLQADGWIGPDGRPRVNIIVSIDGVDIFLNAIDCTGHKKDMNYLANLYEPFI 71
            L+ G ++ +DGW+ P  RP +NI+V  DG  +F+ AID +G  KD +Y+A + +  I
Sbjct:  231 LENGVSIVSDGWLDPQRRPLINIMVVSDGGPVFIKAIDESGEFKDKHYIAEVLKDAI 287
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig136438.2569.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A7N2LHA8_QUELO2.150e-640.35DUF659 domain-containing protein n=4 Tax=Quercus l... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007021Domain of unknown function DUF659PFAMPF04937DUF659coord: 10..72
e-value: 2.3E-8
score: 34.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig136438contigH-elongata_contig136438:808..1379 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig136438.2569.1mRNA_H-elongata_contig136438.2569.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig136438 808..1406 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig136438.2569.1 ID=prot_H-elongata_contig136438.2569.1|Name=mRNA_H-elongata_contig136438.2569.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=73bp
MVEKQSKAKLEERGLQRGKTLQADGWIGPDGRPRVNIIVSIDGVDIFLNA
IDCTGHKKDMNYLANLYEPFIDD
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007021DUF659