prot_H-elongata_contig13643.2568.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig13643.2568.1
Unique Nameprot_H-elongata_contig13643.2568.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length178
Homology
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BLAST of mRNA_H-elongata_contig13643.2568.1 vs. uniprot
Match: D8LBU7_ECTSI (RING-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LBU7_ECTSI)

HSP 1 Score: 249 bits (635), Expect = 3.910e-80
Identity = 141/180 (78.33%), Postives = 152/180 (84.44%), Query Frame = 0 
Query:    2 ERAQARVREYEDQNRGEITKNAAKKVDRDKLVEEQLAALRQQQESRKHYNQLEEARKLQHTRKLKLEAQEVALGERDRVTANMGDNLFV-----DAGGFDETG-EANAGGNNAGALPPGMRQMLNIPAPVPQPQSNQDTRRRFASMAVTKRRPLMQKAAAAPDRKLGAKRNWEEMLGSLF 175
            +RAQA VREYED++RGEITKNAA+KVDR+K+VEEQLAALRQQQESRKHYNQLEEARK QH RKLKLEAQEVALGERD VTA MGD LF+        G D  G E  A GN   A+P GMRQMLNIPAP+PQPQSNQDTRRRFASM+VT+RRP MQKAAAAPDR LGAKRNW EMLGSLF
Sbjct:  125 DRAQATVREYEDRHRGEITKNAARKVDREKVVEEQLAALRQQQESRKHYNQLEEARKQQHARKLKLEAQEVALGERDHVTATMGDGLFLFLDSLTGEGLDGAGGEPGANGNAPAAVPAGMRQMLNIPAPLPQPQSNQDTRRRFASMSVTERRPRMQKAAAAPDRALGAKRNWVEMLGSLF 304
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig13643.2568.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LBU7_ECTSI3.910e-8078.33RING-type domain-containing protein n=2 Tax=Ectoca... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 1..21

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig13643contigH-elongata_contig13643:2900..4554 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig13643.2568.1mRNA_H-elongata_contig13643.2568.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig13643 2425..5153 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig13643.2568.1 ID=prot_H-elongata_contig13643.2568.1|Name=mRNA_H-elongata_contig13643.2568.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=178bp
MERAQARVREYEDQNRGEITKNAAKKVDRDKLVEEQLAALRQQQESRKHY
NQLEEARKLQHTRKLKLEAQEVALGERDRVTANMGDNLFVDAGGFDETGE
ANAGGNNAGALPPGMRQMLNIPAPVPQPQSNQDTRRRFASMAVTKRRPLM
QKAAAAPDRKLGAKRNWEEMLGSLFLL*
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