prot_H-elongata_contig136279.2562.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig136279.2562.1
Unique Nameprot_H-elongata_contig136279.2562.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length141
Homology
BLAST of mRNA_H-elongata_contig136279.2562.1 vs. uniprot
Match: A0A6H5KRH5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRH5_9PHAE)

HSP 1 Score: 202 bits (513), Expect = 2.010e-57
Identity = 99/139 (71.22%), Postives = 112/139 (80.58%), Query Frame = 0
Query:    3 ARADPSQILGIKVKHALWDLEHGTRLTVIIRACIALELTSRYSRVCCEVMAESRCPNVLYDLVGGLNRSPPHQKILMYILKTLRNIAQRGDGLRVIIAAPPAAVVTLTSLLQMYRDHQEVFLSAARLLQQLVSAHRPSK 141
            A ADPSQ+LG +V  AL  LEH T LT IIRACIALELTSRYS+VCCEVMA SRCP VLYDL+ GLNRSPPHQKIL Y++ T RNIAQRGDGL  ++AAPP A  T   LLQMYR+ QEVFL   RLLQQL++AH+P+K
Sbjct: 2187 ALADPSQVLGTRVNDALTALEHCTHLTAIIRACIALELTSRYSKVCCEVMARSRCPQVLYDLIRGLNRSPPHQKILKYVITTFRNIAQRGDGLPALLAAPPVAAETYVDLLQMYRERQEVFLPTVRLLQQLLNAHKPTK 2325          
BLAST of mRNA_H-elongata_contig136279.2562.1 vs. uniprot
Match: D8LLN9_ECTSI (Similar to asp (Abnormal spindle)-like, microcephaly associated n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLN9_ECTSI)

HSP 1 Score: 201 bits (510), Expect = 5.110e-57
Identity = 100/139 (71.94%), Postives = 111/139 (79.86%), Query Frame = 0
Query:    3 ARADPSQILGIKVKHALWDLEHGTRLTVIIRACIALELTSRYSRVCCEVMAESRCPNVLYDLVGGLNRSPPHQKILMYILKTLRNIAQRGDGLRVIIAAPPAAVVTLTSLLQMYRDHQEVFLSAARLLQQLVSAHRPSK 141
            A ADPSQILG +V  AL  LEH T LT IIRACIALELTSRYS+VCCEVMA SRCP VLYDL+ GLNRSPPHQKIL Y + T RNIAQRGDGL  ++AAPP A  T   LLQMYR+ QEVFL   RLLQQL++AH+P+K
Sbjct: 2306 ALADPSQILGTRVNDALTALEHCTHLTAIIRACIALELTSRYSKVCCEVMARSRCPQVLYDLIRGLNRSPPHQKILKYAITTFRNIAQRGDGLPALLAAPPVAAETYVDLLQMYRERQEVFLPTVRLLQQLLNAHKPTK 2444          
BLAST of mRNA_H-elongata_contig136279.2562.1 vs. uniprot
Match: A0A7S3YG01_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YG01_HETAK)

HSP 1 Score: 81.6 bits (200), Expect = 2.310e-16
Identity = 45/137 (32.85%), Postives = 77/137 (56.20%), Query Frame = 0
Query:    2 RARADPSQILGIKVKHALWDLEHGTRLTVIIRACIALELTSRYSRVCCEVMAESRCPNVLYDLVGGLNRSPPHQKILMYILKTLRNIAQRGDGLRVIIAAPPAAVVTLTSLLQMYRDHQEVFLSAARLLQQLVSAHR 138
            +ARA+P+Q LG + + AL  L     +T I + C+ LEL++ YSR CCE    +     +++L+   NRS PHQ++L ++L+ L N+  R   L   +A  P  V  L  ++Q +R+ ++ FL +  L+  +  + R
Sbjct:   16 QARAEPAQRLGSRTRSALEQLLATKSVTQIKKCCVTLELSTTYSRRCCESFVFAEAHLRMFELMRSCNRSLPHQELLKHVLRILANLT-RYPHLVGTVAQAPGCVEVLVDMMQFFRELEDTFLLSVGLVATMARSER 151          
BLAST of mRNA_H-elongata_contig136279.2562.1 vs. uniprot
Match: A0A2V0PC77_9CHLO (Uncharacterized protein n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0PC77_9CHLO)

HSP 1 Score: 80.5 bits (197), Expect = 7.100e-15
Identity = 47/134 (35.07%), Postives = 74/134 (55.22%), Query Frame = 0
Query:    3 ARADPSQILGIKVKHALWDLEHGTRLTVIIRACIALELTSRYSRVCCEVMAESRCPNVLYDLVGGLNRSPPHQKILMYILKTLRNIAQRGDGLRVIIAAPPAAVVTLTSLLQMYRDHQEVFLSAARLLQQLVSA 136
            A   P + +G++ + AL  L    + T +I A  A+E ++RYSR CC ++AES     L   +   NRS PH ++L   L  L N+A+  +    ++ AP    V L+  LQM+RD ++VFLS   LL +L ++
Sbjct: 2067 AECAPHKRIGVRAREALKVLLASKQCTQVITAVSAIEFSTRYSRDCCALIAESGGVPALLSFMRSCNRSKPHAEMLRLALGVLHNVARWRELAPAVLGAPECVAV-LSERLQMFRDMEDVFLSVVGLLSKLAAS 2199          
BLAST of mRNA_H-elongata_contig136279.2562.1 vs. uniprot
Match: A0A0D2MQ02_9CHLO (Putative Abnormal spindle-like microcephaly-associated protein like protein n=1 Tax=Monoraphidium neglectum TaxID=145388 RepID=A0A0D2MQ02_9CHLO)

HSP 1 Score: 74.7 bits (182), Expect = 7.210e-13
Identity = 45/133 (33.83%), Postives = 70/133 (52.63%), Query Frame = 0
Query:    3 ARADPSQILGIKVKHALWDLEHGTRLTVIIRACIALELTSRYSRVCCEVMAESRCPNVLYDLVGGLNRSPPHQKILMYILKTLRNIAQRGDGLRVIIAAPPAAVVTLTSLLQMYRDHQEVFLSAARLLQQLVS 135
            A   P + +G + + AL  L        +I A  A+E ++RYS+ CC ++AES     L   + G NRS PH ++L   L  L N A+  +    ++AAP    V L+  +QM+RD +++FL    LL +L S
Sbjct: 1113 AEGAPHRRIGARAREALKVLLASKSCAQVITAVAAMEFSTRYSKECCTLIAESGGVAALLQFMRGCNRSKPHAEMLRLALAVLHNCARWRELAPPVLAAPECVAV-LSERMQMFRDMEDIFLLVVGLLARLAS 1244          
BLAST of mRNA_H-elongata_contig136279.2562.1 vs. uniprot
Match: D8UIV3_VOLCA (Microtubule-associated protein Asp n=1 Tax=Volvox carteri f. nagariensis TaxID=3068 RepID=D8UIV3_VOLCA)

HSP 1 Score: 63.9 bits (154), Expect = 4.230e-9
Identity = 45/138 (32.61%), Postives = 68/138 (49.28%), Query Frame = 0
Query:    3 ARADPSQILGIKVKHALWDLEHGTR-LTVIIRACIALELTSRYSRVCCEVMAESRCPNVLYDLVGGLNRSPPHQKILMYILKTLRNIAQ----RGDGLRVIIAAPPAAVVTLTSLLQMYRDHQEVFLSAARLLQQLVS 135
            AR  P + +G + + AL  L    R L  ++ A   LE+++RYSR CC+++A+      L   V   NRS PH  +L+  L  L NI      R D     +      +  L+  LQ +RD +EVF +   LLQ+L +
Sbjct: 1355 ARKAPHRHIGNRTREALDSLLRPNRNLPQVLAAVEVLEVSTRYSRDCCKLIAQDDGVTALLRFVRSCNRSKPHIDVLIRTLAALHNICSCPSIRYDTFVPDVFHAEECLAVLSERLQYFRDTEEVFNTTVTLLQRLTA 1492          
BLAST of mRNA_H-elongata_contig136279.2562.1 vs. uniprot
Match: A0A8C5WK03_9ANUR (Assembly factor for spindle microtubules n=2 Tax=Leptobrachium leishanense TaxID=445787 RepID=A0A8C5WK03_9ANUR)

HSP 1 Score: 58.5 bits (140), Expect = 3.250e-7
Identity = 31/91 (34.07%), Postives = 54/91 (59.34%), Query Frame = 0
Query:   28 LTVIIRACIALELTSRYSRVCCEVMAESRCPNVLYDLVGGLNRSPPHQKILMYILKTLRNIAQRGDGLRVIIAAPPAAVVTLTSLLQMYRD 118
            L+ I+ A   LE+ +R S VCCE+MA SR   V++ L+   NRS P  +++   ++ L N+++    ++V+  A   +V  L  L+Q+YR+
Sbjct: 3184 LSYILAALQHLEVATRLSAVCCEIMARSRAVGVIFTLIRSCNRSIPCMEVIKLAVQVLLNLSKYEGTVQVVYEAE-RSVAVLLDLMQIYRE 3273          
BLAST of mRNA_H-elongata_contig136279.2562.1 vs. uniprot
Match: A0A1U8B8T3_NELNU (abnormal spindle-like microcephaly-associated protein homolog isoform X1 n=6 Tax=Nelumbo nucifera TaxID=4432 RepID=A0A1U8B8T3_NELNU)

HSP 1 Score: 57.4 bits (137), Expect = 7.920e-7
Identity = 37/136 (27.21%), Postives = 72/136 (52.94%), Query Frame = 0
Query:    3 ARADPSQILGIKVKHALWDLEHGTRLTVIIRACIALELTSRYSRVCCEVMAESRCPNVLYDLVGGLNRSPPHQKILMYILKTLRNIAQRGDGLRVIIAAPPAAVVTLTSLLQMYRDHQEVFLSAARLLQQLVSAHR 138
            A  D +  L  ++  AL +L     ++ I+  C  L++ +R+S+ CCE++  +     L  L+   +RS P Q++L + L TLRN+A R   L   +     ++ T+    +++R+ +E +  A+ LL++L S  +
Sbjct: 1241 ANVDDNMRLINRLVAALSELLSIRSVSSILHTCATLDMATRHSQKCCEMLVSAGAIETLLKLIRSTSRSIPDQEVLKHALSTLRNLA-RYPHLAEALLDTHGSIETI--FWELFRNKEEGYFIASELLKKLCSRQK 1373          
BLAST of mRNA_H-elongata_contig136279.2562.1 vs. uniprot
Match: UPI001F087A66 (abnormal spindle-like microcephaly-associated protein n=1 Tax=Hypomesus transpacificus TaxID=137520 RepID=UPI001F087A66)

HSP 1 Score: 54.7 bits (130), Expect = 7.070e-6
Identity = 33/105 (31.43%), Postives = 55/105 (52.38%), Query Frame = 0
Query:   14 KVKHALWDLEHGTRLTVIIRACIALELTSRYSRVCCEVMAESRCPNVLYDLVGGLNRSPPHQKILMYILKTLRNIAQRGDGLRVIIAAPPAAVVTLTSLLQMYRD 118
            K   A+  L      + I+ A   LEL +R S  CCE++ ES    V++ L+   NRS P  +++ Y ++ L N+++    +  + A   + V TL  LLQ+YR+
Sbjct: 2824 KTSTAIDHLLQYKHFSYILTALKNLELATRLSPECCEMLVESGATLVIFTLIRSCNRSVPCMEVISYAIQVLLNLSKYHKTVEAVYAVENS-VNTLLDLLQIYRE 2927          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig136279.2562.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 9
Match NameE-valueIdentityDescription
A0A6H5KRH5_9PHAE2.010e-5771.22Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LLN9_ECTSI5.110e-5771.94Similar to asp (Abnormal spindle)-like, microcepha... [more]
A0A7S3YG01_HETAK2.310e-1632.85Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A2V0PC77_9CHLO7.100e-1535.07Uncharacterized protein n=1 Tax=Raphidocelis subca... [more]
A0A0D2MQ02_9CHLO7.210e-1333.83Putative Abnormal spindle-like microcephaly-associ... [more]
D8UIV3_VOLCA4.230e-932.61Microtubule-associated protein Asp n=1 Tax=Volvox ... [more]
A0A8C5WK03_9ANUR3.250e-734.07Assembly factor for spindle microtubules n=2 Tax=L... [more]
A0A1U8B8T3_NELNU7.920e-727.21abnormal spindle-like microcephaly-associated prot... [more]
UPI001F087A667.070e-631.43abnormal spindle-like microcephaly-associated prot... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 15..141
e-value: 1.2E-5
score: 26.2
NoneNo IPR availablePANTHERPTHR22706UNCHARACTERIZEDcoord: 3..131
NoneNo IPR availablePANTHERPTHR22706:SF1ABNORMAL SPINDLE MICROTUBULE ASSEMBLYcoord: 3..131
NoneNo IPR availableTMHMMTMhelixcoord: 94..116
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 27..137

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig136279contigH-elongata_contig136279:108..1765 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig136279.2562.1mRNA_H-elongata_contig136279.2562.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig136279 107..1765 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig136279.2562.1 ID=prot_H-elongata_contig136279.2562.1|Name=mRNA_H-elongata_contig136279.2562.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=141bp
ERARADPSQILGIKVKHALWDLEHGTRLTVIIRACIALELTSRYSRVCCE
VMAESRCPNVLYDLVGGLNRSPPHQKILMYILKTLRNIAQRGDGLRVIIA
APPAAVVTLTSLLQMYRDHQEVFLSAARLLQQLVSAHRPSK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011989ARM-like
IPR016024ARM-type_fold