prot_H-elongata_contig135311.2495.1 (polypeptide) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig135311.2495.1 vs. uniprot
Match: A0A6H5JFG2_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFG2_9PHAE) HSP 1 Score: 225 bits (573), Expect = 9.720e-66 Identity = 137/413 (33.17%), Postives = 218/413 (52.78%), Query Frame = 0
Query: 5 MIAALGWEAR----QLDVDMAYLEAEVEEDIYVELPEAYRDSRKQVGLLKKAMYGLVHAGLLWSNKVRDRARGEGFQISQADPCVFRRILHGVVVVVIVVYVDDLLVASETERDEEQAVRDLYSSFPIKDLGEASYYLECHIMRDRNAGTLKFDQHQCIQTAATIAAAAGGKALSKSDSPQ-TDAEFEEMR-QIPYREIVGTLMWAATMIRPDISFAAYQLAKFNDNPGPTHWRSAQKALQYLWRTRDLGITYGREPGEGTKLSAWINADYGTCPDTRRSVSGGAVMMAGGAMSWFSRIQKVTAAASSKSEYGALAEMVNELCFLQQ-------------------------MAKNRFSSRRTRHVGIKNHIVRDAIDGGVVQIEYVRSGEHQADILTKSVDVKTIQKHAKFL 386
M+AAL E DV+ A++ +E+EED+Y+ LP+ + L K++YGL A W ++ GF+ AD CVFR I G VV+++VV+VDD+ E ER ++ DL S P+K+LGE +Y C R++ G L Q A GG+++ S + +D + +E+ + P+RE+VG+LMW AT RPDI+ A +A++ +P HW +A L Y RT GI++ R EG L + +AD+ + RRSVSGG V GGA+SWFSR QK +++++EY AL ++V E+ FL+Q +A+N S+ ++H+ +++H +R+ ++ + + +V S +AD LTKS+ + H F+
Sbjct: 47 MLAALACELNLDLCHFDVEQAFVRSELEEDVYMRLPQGCGALSGMIVKLGKSLYGLRQASRQWHAMLKRCLVALGFEQCMADACVFRLIEDGCVVLILVVHVDDIFAVGERERCDKFGA-DLNKSVPVKNLGELRWYSGCFYERNKETGRLTISQQTFTDELAAEYGVVGGRSVPMSSGVKLSDFDADEVATEFPFRELVGSLMWLATQTRPDIANAVRAVARYCASPKLVHWNAAMDILGYARRTSHFGISFQRGTVEGFSLQGYADADFASKAADRRSVSGGIVTCGGGAVSWFSRTQKCVTLSTTEAEYVALGDVVKEILFLRQIWRFMLPQVGMPCIPVFEDNQGAIQLAQNPISNSNSKHIDVRHHFLRELVERKEISVIHVPSPYQRADFLTKSLPKDAFESHRDFV 458
BLAST of mRNA_H-elongata_contig135311.2495.1 vs. uniprot
Match: A0A6H5JLN0_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLN0_9PHAE) HSP 1 Score: 220 bits (561), Expect = 3.180e-64 Identity = 135/414 (32.61%), Postives = 220/414 (53.14%), Query Frame = 0
Query: 5 MIAALGWEA----RQLDVDMAYLEAEVEEDIYVELPEAYRDSRKQVGLLKKAMYGLVHAGLLWSNKVRDRARGEGFQISQADPCVFRRILHGVVVVVIVVYVDDLLVASETERDEEQAVRDLYSSFPIKDLGEASYYLECHIMRDRNAGTLKFDQHQCIQTAATIAAAAGGKALSKSDSPQTDAEFEEMRQI---PYREIVGTLMWAATMIRPDISFAAYQLAKFNDNPGPTHWRSAQKALQYLWRTRDLGITYGREPGEGTKLSAWINADYGTCPDTRRSVSGGAVMMAGGAMSWFSRIQKVTAAASSKSEYGALAEMVNELCFLQQ-------------------------MAKNRFSSRRTRHVGIKNHIVRDAIDGGVVQIEYVRSGEHQADILTKSVDVKTIQKHAKFL 386
++AA+ E R D+ A+++++++ED+++ LPE + L K++YGL A W + + GF AD CVFR I G VVV +VV+VDD+ E ER + Q RDL + P+K+LG+ +Y C RD +AGTLK Q + GK + + +EF++ ++ P+RE++G+LMW AT RPDI+ A +A++ +P HWR+ L Y+ RT DLGIT+ R G + +++ADY + RRSVSGG VM GG +SWFSR QK +++++EY +LA+++ E+ FL+Q +A+N S+ ++H+ +++H +R+ + + I +V S AD LTK++ + H ++
Sbjct: 23 LLAAMACEQNLSLRHFDIKQAFVQSDLDEDVFMRLPEGCGRLSGMIVKLNKSLYGLKQASRQWHSHLARCLICLGFIQCMADTCVFRLIEEGRVVVTLVVHVDDIFSIGEEERCD-QFGRDLNTMVPVKNLGDLRWYSGCFYERDWDAGTLKISQQTYAEELGMEFGVEYGKEIPLPVGLKL-SEFDQDEEVVSWPFRELIGSLMWLATQTRPDIANAVRAVARYCASPKEIHWRAGLGILGYVVRTSDLGITFRRGSVAGLSMEVFVDADYASKAADRRSVSGGLVMCGGGCISWFSRTQKCVTLSTTEAEYVSLADVMKEVLFLRQVWRFMLPEAGMPCIPVFEDNQGAIQLAQNPISNSNSKHIDVRHHFIRELVGRKEISIFHVESAYQHADFLTKALHAGDFEFHRNYV 434
BLAST of mRNA_H-elongata_contig135311.2495.1 vs. uniprot
Match: A0A8K1CTN1_PYTOL (Uncharacterized protein n=2 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CTN1_PYTOL) HSP 1 Score: 218 bits (555), Expect = 1.310e-62 Identity = 139/412 (33.74%), Postives = 214/412 (51.94%), Query Frame = 0
Query: 3 LSMIAALGWEARQLDVDMAYLEAEVEEDIYVELPEAYRDSRKQVGLLKKAMYGLVHAGLLWSNKVRDRARGEGFQISQADPCVFRRILHGVVVVVIVVYVDDLLVASETERDEEQAVRDLYSSFPIKDLGEASYYLECHIMRDRNAGTLKFDQHQCIQTAA----------TIAAAAGGKALSKSDSPQTDAEFEEMRQIPYREIVGTLMWAATMIRPDISFAAYQLAKFNDNPGPTHWRSAQKALQYLWRTRDLGITYGREPGEGTKLSAWINADYGTCPDTRRSVSGGAVMMAGGAMSWFSRIQKVTAAASSKSEYGALAEMVNELCFLQQM------------------------AKNRFSSRRTRHVGIKNHIVRDAIDGGVVQIEYVRSGEHQADILTKSVDVKTIQ 380
LS+ A G+ QLDVD A+L A+++ED+Y+E PE + +V L KA+YGL AG W + GF+ +D C++ G I +YVDD++V T+ ++ + + + F IK+LG + L I+ DR L +Q ++T LSK+D P+ D + EM + PYR ++G L + A RPDI+FA L++F +NPGP HW +A + L+YL TRD GI+YG + E T + + +AD+GT D RRSVSG +MM GG + + ++ Q A +SS++EY AL+ E+ +++ M A N RT+H+ I++H VRD + V+++ YV + ADILTKS+ K +
Sbjct: 91 LSVCCAAGYILEQLDVDTAFLNADLKEDVYIEPPEGLKVDGDRVLKLNKALYGLKQAGNAWFKTIHGALIDLGFKPCGSDTCIYVGRAGGDTTY-ICLYVDDMVVGGRTQTRVDEVKKLIAARFRIKELGPVKHLLGMEIVYDRVKRYLSINQAHYVKTLVERFNQQSCRDVTNPCEQSLKLSKADGPRDDQQKAEMSKRPYRSLIGCLQYVAQCTRPDIAFAVTHLSRFMENPGPRHWTAAIRVLRYLKSTRDYGISYGGDHEENTPV-VFCDADWGTSVDDRRSVSGLVIMMNGGPIVFKAKYQSTVALSSSEAEYLALSLCGQEVMWVRTMLHDLGINIKKPIQVWEDNQGAIALAHNAGYHARTKHIDIRHHYVRDLVADSVIKLSYVETQRQLADILTKSLGTKRFE 500
BLAST of mRNA_H-elongata_contig135311.2495.1 vs. uniprot
Match: A0A6H5KQB8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQB8_9PHAE) HSP 1 Score: 220 bits (561), Expect = 1.520e-62 Identity = 135/414 (32.61%), Postives = 220/414 (53.14%), Query Frame = 0
Query: 5 MIAALGWEA----RQLDVDMAYLEAEVEEDIYVELPEAYRDSRKQVGLLKKAMYGLVHAGLLWSNKVRDRARGEGFQISQADPCVFRRILHGVVVVVIVVYVDDLLVASETERDEEQAVRDLYSSFPIKDLGEASYYLECHIMRDRNAGTLKFDQHQCIQTAATIAAAAGGKALSKSDSPQTDAEFEEMRQI---PYREIVGTLMWAATMIRPDISFAAYQLAKFNDNPGPTHWRSAQKALQYLWRTRDLGITYGREPGEGTKLSAWINADYGTCPDTRRSVSGGAVMMAGGAMSWFSRIQKVTAAASSKSEYGALAEMVNELCFLQQ-------------------------MAKNRFSSRRTRHVGIKNHIVRDAIDGGVVQIEYVRSGEHQADILTKSVDVKTIQKHAKFL 386
++AA+ E R D+ A+++++++ED+++ LPE + L K++YGL A W + + GF AD CVFR I G VVV +VV+VDD+ E ER + Q RDL + P+K+LG+ +Y C RD +AGTLK Q + GK + + +EF++ ++ P+RE++G+LMW AT RPDI+ A +A++ +P HWR+ L Y+ RT DLGIT+ R G + +++ADY + RRSVSGG VM GG +SWFSR QK +++++EY +LA+++ E+ FL+Q +A+N S+ ++H+ +++H +R+ + + I +V S AD LTK++ + H ++
Sbjct: 197 LLAAMACEQNLSLRHFDIKQAFVQSDLDEDVFMRLPEGCGRLSGMIVKLNKSLYGLKQASRQWHSHLARCLICLGFIQCMADTCVFRLIEEGRVVVTLVVHVDDIFSIGEEERCD-QFGRDLNTMVPVKNLGDLRWYSGCFYERDWDAGTLKISQQTYAEELGMEFGVEYGKEIPLPVGLKL-SEFDQDEEVVSWPFRELIGSLMWLATQTRPDIANAVRAVARYCASPKEIHWRAGLGILGYVVRTSDLGITFRRGSVAGLSMEVFVDADYASKAADRRSVSGGLVMCGGGCISWFSRTQKCVTLSTTEAEYVSLADVMKEVLFLRQVWRFMLPEAGMPCIPVFEDNQGAIQLAQNPISNSNSKHIDVRHHFIRELVGRKEISIFHVESAYQHADFLTKALHAGDFEFHRNYV 608
BLAST of mRNA_H-elongata_contig135311.2495.1 vs. uniprot
Match: A0A6H5J4N2_9PHAE (Integrase catalytic domain-containing protein n=18 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J4N2_9PHAE) HSP 1 Score: 225 bits (573), Expect = 1.040e-61 Identity = 137/413 (33.17%), Postives = 218/413 (52.78%), Query Frame = 0
Query: 5 MIAALGWEAR----QLDVDMAYLEAEVEEDIYVELPEAYRDSRKQVGLLKKAMYGLVHAGLLWSNKVRDRARGEGFQISQADPCVFRRILHGVVVVVIVVYVDDLLVASETERDEEQAVRDLYSSFPIKDLGEASYYLECHIMRDRNAGTLKFDQHQCIQTAATIAAAAGGKALSKSDSPQ-TDAEFEEMR-QIPYREIVGTLMWAATMIRPDISFAAYQLAKFNDNPGPTHWRSAQKALQYLWRTRDLGITYGREPGEGTKLSAWINADYGTCPDTRRSVSGGAVMMAGGAMSWFSRIQKVTAAASSKSEYGALAEMVNELCFLQQ-------------------------MAKNRFSSRRTRHVGIKNHIVRDAIDGGVVQIEYVRSGEHQADILTKSVDVKTIQKHAKFL 386
M+AAL E DV+ A++ +E+EED+Y+ LP+ + L K++YGL A W ++ GF+ AD CVFR I G VV+++VV+VDD+ E ER ++ DL S P+K+LGE +Y C R++ G L Q A GG+++ S + +D + +E+ + P+RE+VG+LMW AT RPDI+ A +A++ +P HW +A L Y RT GI++ R EG L + +AD+ + RRSVSGG V GGA+SWFSR QK +++++EY AL ++V E+ FL+Q +A+N S+ ++H+ +++H +R+ ++ + + +V S +AD LTKS+ + H F+
Sbjct: 1383 MLAALACELNLDLCHFDVEQAFVRSELEEDVYMRLPQGCGALSGMIVKLGKSLYGLRQASRQWHAMLKRCLVALGFEQCMADACVFRLIEDGCVVLILVVHVDDIFAVGERERCDKFGA-DLNKSVPVKNLGELRWYSGCFYERNKETGRLTISQQTFTDELAAEYGVVGGRSVPMSSGVKLSDFDADEVATEFPFRELVGSLMWLATQTRPDIANAVRAVARYCASPKLVHWNAAMDILGYARRTSHFGISFQRGTVEGFSLQGYADADFASKAADRRSVSGGIVTCGGGAVSWFSRTQKCVTLSTTEAEYVALGDVVKEILFLRQIWRFMLPQVGMPCIPVFEDNQGAIQLAQNPISNSNSKHIDVRHHFLRELVERKEISVIHVPSPYQRADFLTKSLPKDAFESHRDFV 1794
BLAST of mRNA_H-elongata_contig135311.2495.1 vs. uniprot
Match: A0A6H5L867_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L867_9PHAE) HSP 1 Score: 223 bits (568), Expect = 4.820e-61 Identity = 136/409 (33.25%), Postives = 216/409 (52.81%), Query Frame = 0
Query: 5 MIAALGWEAR----QLDVDMAYLEAEVEEDIYVELPEAYRDSRKQVGLLKKAMYGLVHAGLLWSNKVRDRARGEGFQISQADPCVFRRILHGVVVVVIVVYVDDLLVASETERDEEQAVRDLYSSFPIKDLGEASYYLECHIMRDRNAGTLKFDQHQCIQTAATIAAAAGGKALSKSDSPQ-TDAEFEEMR-QIPYREIVGTLMWAATMIRPDISFAAYQLAKFNDNPGPTHWRSAQKALQYLWRTRDLGITYGREPGEGTKLSAWINADYGTCPDTRRSVSGGAVMMAGGAMSWFSRIQKVTAAASSKSEYGALAEMVNELCFLQQ-------------------------MAKNRFSSRRTRHVGIKNHIVRDAIDGGVVQIEYVRSGEHQADILTKSVDVKTIQKH 382
M+AAL E DV+ A++ +E+EED+Y+ LP+ + L K++YGL A W ++ GF+ AD CVFR I G VV+++VV+VDD+ E ER ++ DL S P+K+LGE +Y C R++ G L Q A GG+++ S + +D + +E+ + P+RE+VG+LMW AT RPDI+ A +A++ +P HW +A L Y RT GI++ R EG L + +AD+ + RRSVSGG V GGA+SWFSR QK +++++EY AL ++V E+ FL+Q +A+N S+ ++H+ +++H +R+ ++ + + +V S +AD LTKS+ + H
Sbjct: 1169 MLAALACELNLDLCHFDVEQAFVRSELEEDVYMRLPQGCGALSGMIVKLGKSLYGLRQASRQWHAMLKRCLVALGFEQCMADACVFRLIEDGCVVLILVVHVDDIFAVGERERCDKFGA-DLNKSVPVKNLGELRWYSGCFYERNKETGRLTISQQTFTDELAAEYGVVGGRSVPMSSGVKLSDFDADEVATEFPFRELVGSLMWLATQTRPDIANAVRAVARYCASPKLVHWNAAMDILGYARRTSHFGISFQRGTVEGFSLQGYADADFASKAADRRSVSGGIVTCGGGAVSWFSRTQKCVTLSTTEAEYVALGDVVKEILFLRQIWRFMLPQVGMPCIPVFEDNQGAIQLAQNPISNSNSKHIDVRHHFLRELVERKEISVIHVPSPYQRADFLTKSLPKDAFESH 1576
BLAST of mRNA_H-elongata_contig135311.2495.1 vs. uniprot
Match: A0A6H5KBD4_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBD4_9PHAE) HSP 1 Score: 223 bits (568), Expect = 5.140e-61 Identity = 136/409 (33.25%), Postives = 216/409 (52.81%), Query Frame = 0
Query: 5 MIAALGWEAR----QLDVDMAYLEAEVEEDIYVELPEAYRDSRKQVGLLKKAMYGLVHAGLLWSNKVRDRARGEGFQISQADPCVFRRILHGVVVVVIVVYVDDLLVASETERDEEQAVRDLYSSFPIKDLGEASYYLECHIMRDRNAGTLKFDQHQCIQTAATIAAAAGGKALSKSDSPQ-TDAEFEEMR-QIPYREIVGTLMWAATMIRPDISFAAYQLAKFNDNPGPTHWRSAQKALQYLWRTRDLGITYGREPGEGTKLSAWINADYGTCPDTRRSVSGGAVMMAGGAMSWFSRIQKVTAAASSKSEYGALAEMVNELCFLQQ-------------------------MAKNRFSSRRTRHVGIKNHIVRDAIDGGVVQIEYVRSGEHQADILTKSVDVKTIQKH 382
M+AAL E DV+ A++ +E+EED+Y+ LP+ + L K++YGL A W ++ GF+ AD CVFR I G VV+++VV+VDD+ E ER ++ DL S P+K+LGE +Y C R++ G L Q A GG+++ S + +D + +E+ + P+RE+VG+LMW AT RPDI+ A +A++ +P HW +A L Y RT GI++ R EG L + +AD+ + RRSVSGG V GGA+SWFSR QK +++++EY AL ++V E+ FL+Q +A+N S+ ++H+ +++H +R+ ++ + + +V S +AD LTKS+ + H
Sbjct: 1237 MLAALACELNLDLCHFDVEQAFVRSELEEDVYMRLPQGCGALSGMIVKLGKSLYGLRQASRQWHAMLKRCLVALGFEQCMADACVFRLIEDGCVVLILVVHVDDIFAVGERERCDKFGA-DLNKSVPVKNLGELRWYSGCFYERNKETGRLTISQQTFTDELAAEYGVVGGRSVPMSSGVKLSDFDADEVATEFPFRELVGSLMWLATQTRPDIANAVRAVARYCASPKLVHWNAAMDILGYARRTSHFGISFQRGTVEGFSLQGYADADFASKAADRRSVSGGIVTCGGGAVSWFSRTQKCVTLSTTEAEYVALGDVVKEILFLRQIWRFMLPQVGMPCIPVFEDNQGAIQLAQNPISNSNSKHIDVRHHFLRELVERKEISVIHVPSPYQRADFLTKSLPKDAFESH 1644
BLAST of mRNA_H-elongata_contig135311.2495.1 vs. uniprot
Match: A0A6A3J8V8_9STRA (Reverse transcriptase Ty1/copia-type domain-containing protein n=5 Tax=Phytophthora TaxID=4783 RepID=A0A6A3J8V8_9STRA) HSP 1 Score: 211 bits (536), Expect = 1.360e-60 Identity = 131/414 (31.64%), Postives = 222/414 (53.62%), Query Frame = 0
Query: 2 VLSMIAALGWEARQLDVDMAYLEAEVEEDIYVELPEAYRDSRKQVGLLKKAMYGLVHAGLLWSNKVRDRARGEGFQISQADPCVFRRILHGVVVVVIVVYVDDLLVASETERDEEQAVRDLYSSFPIKDLGEASYYLECHIMRDRNAGTLKFDQHQCIQTA----------ATIAAAAGGKALSKSDSPQTDAEFEEMRQIPYREIVGTLMWAATMIRPDISFAAYQLAKFNDNPGPTHWRSAQKALQYLWRTRDLGITYGREPGEGTKLSAWINADYGTCPDTRRSVSGGAVMMAGGAMSWF-SRIQKVTAAASSKSEYGALAEMVNELCFLQQ------------------------MAKNRFSSRRTRHVGIKNHIVRDAIDGGVVQIEYVRSGEHQADILTKSVDVKTIQ 380
VLS++ A+ + QLD D A+ ++++E +++E+P ++ + L KA+YGL A W + GF+ AD CV+ ++ V V + YVDD+++A++T + + L S+F +K+LGEA + L I DR GTL Q + + A + G LSK+ SP TDAE E+MR PY+ ++G+L++ T RPD+++ QL++F +NPG HW++A + L+YL T+D GI Y G+ L + +AD+G+ D RRSVSG +MM GGA F S+ Q+ A +S+++EY AL+ E+ + + +A N + RT+ V I++H + + + ++ ++YV + + AD+LTK++ K ++
Sbjct: 7 VLSVVVAMAYVTEQLDADTAFPNSDLKEQVFMEVPYGITNAANMMCKLDKAIYGLKQAASAWHQTIHAVFVKIGFRSCGADKCVYVKVSKDNYVYVCL-YVDDMIIAAKTSEEINEVKMALKSAFKMKELGEAKFILGMEIDHDRTTGTLMVKQTRYVDDVVNRFNQQDAKAVVNPCETGMKLSKTQSPATDAEREDMRGKPYKSLIGSLLYITTCTRPDVAYIVTQLSQFLENPGQQHWKAAIRVLRYLKTTKDFGIVYSGNNGKAV-LEVYTDADWGSNLDGRRSVSG-IMMMIGGAPGVFKSKYQRTVALSSAEAEYMALSLCTQEVLWTRATLKDLGHEQVGATQVWEDNQGAIALASNAGYNARTKRVDIRHHYIGENVARDIITVDYVGTEDQLADLLTKALGTKRLK 417
BLAST of mRNA_H-elongata_contig135311.2495.1 vs. uniprot
Match: A0A6H5J9U0_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9U0_9PHAE) HSP 1 Score: 219 bits (557), Expect = 3.730e-60 Identity = 138/413 (33.41%), Postives = 215/413 (52.06%), Query Frame = 0
Query: 5 MIAALGWEAR----QLDVDMAYLEAEVEEDIYVELPEAYRDSRKQVGLLKKAMYGLVHAGLLWSNKVRDRARGEGFQISQADPCVFRRILHGVVVVVIVVYVDDLLVASETERDEEQAVRDLYSSFPIKDLGEASYYLECHIMRDRNAGTLKFDQHQCIQTAATIAAAAGGKALSKSDSPQ-TDAEFEEMR-QIPYREIVGTLMWAATMIRPDISFAAYQLAKFNDNPGPTHWRSAQKALQYLWRTRDLGITYGREPGEGTKLSAWINADYGTCPDTRRSVSGGAVMMAGGAMSWFSRIQKVTAAASSKSEYGALAEMVNELCFLQQ-------------------------MAKNRFSSRRTRHVGIKNHIVRDAIDGGVVQIEYVRSGEHQADILTKSVDVKTIQKHAKFL 386
M+AAL E DV+ A++ +E+EED+Y+ LP+ + L K++YGL A W ++ GF+ AD CVFR I G VV+++VV+VDD+ E ER ++ DL S P+K+LGE +Y C R++ G L Q A GGK++ S + +D + +E+ P+RE+VG+LMW AT RP I+ A +A++ +P HW +A L Y RT GI++ R EG L + +AD+ + RRSVSGG V GGA+SWFSR QK +++++EY AL M E+ FL+Q +A+N S+ ++H+ +++H +R+ ++ + + +V S +AD LTKS+ T + H F+
Sbjct: 517 MLAALACELNLDLCHFDVEQAFVRSELEEDVYMRLPQGCGALSGMIVKLGKSLYGLRQASRQWHAMLKRCLVALGFEQCMADACVFRLIEDGCVVLILVVHVDDIFAVGERERCDKFGA-DLNKSVPVKNLGELRWYSGCFYERNKETGRLTISQQTFTDELAAEYGVVGGKSVPMSSGVKLSDFDADEVATDFPFRELVGSLMWLATQTRPGIANAVRAVARYCASPKLVHWNAAMDILGYARRTSHFGISFQRGTVEGFSLQGYADADFASKAADRRSVSGGIVTCGGGAVSWFSRTQKCVTLSTTEAEYVALGXM-KEILFLRQIWRFMLPQVGMPCIPVFDDNQGAIQLAQNPISNSNSKHIDVRHHFLRELVERKKISVIHVPSPYQRADFLTKSLPEDTFESHRDFV 927
BLAST of mRNA_H-elongata_contig135311.2495.1 vs. uniprot
Match: A0A6A4CLK4_9STRA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=10 Tax=Phytophthora TaxID=4783 RepID=A0A6A4CLK4_9STRA) HSP 1 Score: 211 bits (538), Expect = 4.910e-60 Identity = 141/414 (34.06%), Postives = 216/414 (52.17%), Query Frame = 0
Query: 2 VLSMIAALGWEARQLDVDMAYLEAEVEEDIYVELPEAYRDSRKQVGLLKKAMYGLVHAGLLWSNKVRDRARGEGFQISQADPCVF-RRILHGVVVVVIVVYVDDLLVASETERDEEQAVRDLYSSFPIKDLGEASYYLECHIMRDRNAGTLKFD---------QHQCIQTAATIA-AAAGGKALSKSDSPQTDAEFEEMRQIPYREIVGTLMWAATMIRPDISFAAYQLAKFNDNPGPTHWRSAQKALQYLWRTRDLGITYGREPGEGTKLSAWINADYGTCPDTRRSVSGGAVMMAGGAMSWFSRIQKVTAAASSKSEYGALAEMVNELCFLQQM------------------------AKNRFSSRRTRHVGIKNHIVRDAIDGGVVQIEYVRSGEHQADILTKSVDVKTIQ 380
VLS+ AA + QLD D A+L +E+++ +Y+E+P ++R L KA+YGL A W+ + G GF+ AD CV+ +R +G + V + YVDD+++A++T + L ++F +K+LG A + L I D AGTLK +H + A + A G LSK+ SP TDAE MR PYR ++G L++ T RPDI+F QL++F +NP HW +A + L+YL T GI Y T L A+ +AD+GT D RRS SG VM + + S+ Q+ A +S+++EY AL+ V E+ + + M N RT+HV I++H + ++ G V++EYV + ADILTK++ KT++
Sbjct: 91 VLSVCAAYEYRMEQLDADTAFLNSELKDRVYMEVPFGIENARGYQYQLNKAIYGLKQAASAWNKTIHRVFLGNGFKSCGADQCVYVKRSKNGFIYVCL--YVDDMIIAAKTSEEIRDVKDALKNAFKMKELGPAKFILGMEIDHDMTAGTLKIKPTRYIDDVVEHFGQENAKPVDNPCAAGLKLSKTQSPGTDAEQNAMRSKPYRSLIGCLLYITTCTRPDIAFVVTQLSRFLENPEKQHWNAAVRVLRYLKSTLQHGIIYHGGTHTVT-LKAYSDADWGTSLDDRRSGSGVMVMTGNAPVVFKSKFQRTVALSSAEAEYMALSLCVQEVLWTRAMLTVMGTLQRNATTIWEDNQGAIALVHNAGYHARTKHVDIRHHFTTENVERGTVKVEYVDTKNQLADILTKALGTKTLK 501 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig135311.2495.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-elongata_contig135311.2495.1 ID=prot_H-elongata_contig135311.2495.1|Name=mRNA_H-elongata_contig135311.2495.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=386bpback to top |