prot_H-elongata_contig135177.2484.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig135177.2484.1
Unique Nameprot_H-elongata_contig135177.2484.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length104
Homology
BLAST of mRNA_H-elongata_contig135177.2484.1 vs. uniprot
Match: A0A177U095_9BASI (Integrase catalytic domain-containing protein n=2 Tax=Tilletia TaxID=13289 RepID=A0A177U095_9BASI)

HSP 1 Score: 93.6 bits (231), Expect = 4.600e-20
Identity = 41/103 (39.81%), Postives = 63/103 (61.17%), Query Frame = 0
Query:    1 MSEAQASSEWPQWKRAIAREMNGQIARGVWQVVECPKGKTVLGSRVVFKRKIDKDGRIEKYKCRLLAQGFRQVKGIHYDESSSPTPAQASIRMVLGMIAALGW 103
            + +A    +W +W  A+  E++  +  G W++ E P+G+ V+GSR VFK K+D  G + +YK RL+AQGF Q+ G+ YDE+ SP     SIR +L + A   W
Sbjct:  610 LKDAMRRPDWAKWLEAMREEIDSHMEMGTWELAELPEGRDVVGSRWVFKLKLDSAGNVARYKGRLVAQGFSQIPGVDYDETYSPVTRFISIRTLLALAAYFHW 712          
BLAST of mRNA_H-elongata_contig135177.2484.1 vs. uniprot
Match: A0A177U1E5_9BASI (Integrase catalytic domain-containing protein n=2 Tax=Tilletia TaxID=13289 RepID=A0A177U1E5_9BASI)

HSP 1 Score: 93.2 bits (230), Expect = 6.300e-20
Identity = 38/102 (37.25%), Postives = 67/102 (65.69%), Query Frame = 0
Query:    2 SEAQASSEWPQWKRAIAREMNGQIARGVWQVVECPKGKTVLGSRVVFKRKIDKDGRIEKYKCRLLAQGFRQVKGIHYDESSSPTPAQASIRMVLGMIAALGW 103
            +EA+  S+W +W +A+  +M+  +    W +V+ P G+  +GSR V+K K+D++G+ +++K RL+AQGF QV G+ Y E+ +P     S+R++L + A  GW
Sbjct:  736 AEARRRSDWEKWNKAMDEQMDALVGMHTWDLVQLPPGRKAIGSRWVYKLKLDEEGKADRWKARLVAQGFTQVAGVDYFETFAPVARLDSLRVILALAAHFGW 837          
BLAST of mRNA_H-elongata_contig135177.2484.1 vs. uniprot
Match: A0A5C3E5T1_9BASI (Uncharacterized protein n=2 Tax=Ustilago trichophora TaxID=86804 RepID=A0A5C3E5T1_9BASI)

HSP 1 Score: 92.8 bits (229), Expect = 8.620e-20
Identity = 40/103 (38.83%), Postives = 64/103 (62.14%), Query Frame = 0
Query:    1 MSEAQASSEWPQWKRAIAREMNGQIARGVWQVVECPKGKTVLGSRVVFKRKIDKDGRIEKYKCRLLAQGFRQVKGIHYDESSSPTPAQASIRMVLGMIAALGW 103
            + EA+   +WP W+ AI +E+      G W + + P G+  +GS+ VFK K+  DG ++KYK RL+AQGF Q  G+ YDE+ +P    A++R+++ + A  GW
Sbjct:  833 IEEAKRRPDWPHWETAIKKELASLSENGTWTLEDLPPGRRAVGSKWVFKIKLKADGTVDKYKARLVAQGFTQQHGVDYDETFAPVLKFATLRLLIALAAQEGW 935          
BLAST of mRNA_H-elongata_contig135177.2484.1 vs. uniprot
Match: A0A177TL22_9BASI (Integrase catalytic domain-containing protein n=1 Tax=Tilletia indica TaxID=43049 RepID=A0A177TL22_9BASI)

HSP 1 Score: 92.4 bits (228), Expect = 1.170e-19
Identity = 39/101 (38.61%), Postives = 64/101 (63.37%), Query Frame = 0
Query:    3 EAQASSEWPQWKRAIAREMNGQIARGVWQVVECPKGKTVLGSRVVFKRKIDKDGRIEKYKCRLLAQGFRQVKGIHYDESSSPTPAQASIRMVLGMIAALGW 103
            EA+   +W +W +A+  +MN  +    W +VE P G+  +GSR V+K K+++DG  +++K RL+AQGF QV G+ Y E+ +P     S+R++L + A  GW
Sbjct:  638 EARKRRDWDKWSKAMDEQMNALVGMHTWDLVELPAGRKAIGSRWVYKLKLNEDGMADRWKARLVAQGFTQVAGVDYFETFAPVARLDSLRVILALAAHFGW 738          
BLAST of mRNA_H-elongata_contig135177.2484.1 vs. uniprot
Match: A0A1X7VXK3_AMPQE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Amphimedon queenslandica TaxID=400682 RepID=A0A1X7VXK3_AMPQE)

HSP 1 Score: 87.8 bits (216), Expect = 1.230e-19
Identity = 44/97 (45.36%), Postives = 63/97 (64.95%), Query Frame = 0
Query:    1 MSEAQASSEWPQWKRAIAREMNGQIARGVWQVVECPKGKTVLGSRVVFKRKIDKDGRIEKYKCRLLAQGFRQVKGIHYDESSSPTPAQASIRMVLGM 97
            ++EA +SSE  +WK A+ REM    A  V+ +VE PK K V+GS+ +F+RKI+ DG +E+YK RL+AQ F Q  G+ YDE+        SIR V+ +
Sbjct:    9 INEALSSSEADKWKEAMEREMESLKANDVYDLVELPKNKEVIGSKWIFRRKINADGSVERYKARLVAQRFSQTHGLDYDETFCRVVCFESIRSVIAV 105          
BLAST of mRNA_H-elongata_contig135177.2484.1 vs. uniprot
Match: A0A177T913_9BASI (Integrase catalytic domain-containing protein n=1 Tax=Tilletia indica TaxID=43049 RepID=A0A177T913_9BASI)

HSP 1 Score: 92.0 bits (227), Expect = 1.600e-19
Identity = 40/103 (38.83%), Postives = 63/103 (61.17%), Query Frame = 0
Query:    1 MSEAQASSEWPQWKRAIAREMNGQIARGVWQVVECPKGKTVLGSRVVFKRKIDKDGRIEKYKCRLLAQGFRQVKGIHYDESSSPTPAQASIRMVLGMIAALGW 103
            + +A   ++W  W +A+  EM      G W + E P+ + ++GSR VFK K+D +G + +YK RL+AQGF Q+ G+ Y+E+ SP     +IR +L + A LGW
Sbjct:  665 LKDAMRRTDWALWLQAMREEMESHSEMGTWVLEEVPEDRELVGSRWVFKLKLDSEGNVARYKARLVAQGFSQIPGVDYNETYSPVTRFVTIRTLLALAAFLGW 767          
BLAST of mRNA_H-elongata_contig135177.2484.1 vs. uniprot
Match: A0A177VQ04_9BASI (Integrase catalytic domain-containing protein n=2 Tax=Tilletia TaxID=13289 RepID=A0A177VQ04_9BASI)

HSP 1 Score: 91.3 bits (225), Expect = 2.970e-19
Identity = 40/103 (38.83%), Postives = 62/103 (60.19%), Query Frame = 0
Query:    1 MSEAQASSEWPQWKRAIAREMNGQIARGVWQVVECPKGKTVLGSRVVFKRKIDKDGRIEKYKCRLLAQGFRQVKGIHYDESSSPTPAQASIRMVLGMIAALGW 103
            + +A   S+W QW +A+  EM      G W + + P  + ++GSR VFK K+D +G + +YK RL+AQGF Q+ G+ Y+E+ SP     +IR +L + A  GW
Sbjct:  613 LKDAMRRSDWAQWLQAMREEMESHSEMGTWVLEKVPDDRELVGSRWVFKLKLDSEGAVSRYKARLVAQGFSQIFGVDYNETYSPVTRFVTIRTLLALAAYFGW 715          
BLAST of mRNA_H-elongata_contig135177.2484.1 vs. uniprot
Match: A0A177U0N4_9BASI (Integrase catalytic domain-containing protein n=2 Tax=Tilletia TaxID=13289 RepID=A0A177U0N4_9BASI)

HSP 1 Score: 91.3 bits (225), Expect = 2.970e-19
Identity = 39/101 (38.61%), Postives = 63/101 (62.38%), Query Frame = 0
Query:    3 EAQASSEWPQWKRAIAREMNGQIARGVWQVVECPKGKTVLGSRVVFKRKIDKDGRIEKYKCRLLAQGFRQVKGIHYDESSSPTPAQASIRMVLGMIAALGW 103
            EA+   +W +W  A+  +MN  +    W +VE P G+  +GSR V+K K+++DG  +++K RL+AQGF QV G+ Y E+ +P     S+R++L + A  GW
Sbjct:  639 EAKRRRDWDKWSTAMDEQMNALVGMHTWDLVELPAGRKAIGSRWVYKLKLNEDGMADRWKARLVAQGFTQVAGVDYFETFAPVARLDSLRVILALAAHFGW 739          
BLAST of mRNA_H-elongata_contig135177.2484.1 vs. uniprot
Match: A0A401GQU1_9APHY (Uncharacterized protein n=3 Tax=Sparassis crispa TaxID=139825 RepID=A0A401GQU1_9APHY)

HSP 1 Score: 91.3 bits (225), Expect = 3.000e-19
Identity = 42/103 (40.78%), Postives = 66/103 (64.08%), Query Frame = 0
Query:    1 MSEAQASSEWPQWKRAIAREMNGQIARGVWQVVECPKGKTVLGSRVVFKRKIDKDGRIEKYKCRLLAQGFRQVKGIHYDESSSPTPAQASIRMVLGMIAALGW 103
            + EA  S +WPQW++AI +EM        + +VE P+   V+GS+ VF+ K + +G+IE YK RL+AQGF Q+ GI ++++ +P    ASIR++L + A   W
Sbjct:  963 LEEAMQSPDWPQWQKAIEKEMRNLRDHHTYDLVEPPENTNVVGSKFVFRIKRNANGKIESYKARLVAQGFSQIPGIDFNDTFAPVAKLASIRIILALAARHDW 1065          
BLAST of mRNA_H-elongata_contig135177.2484.1 vs. uniprot
Match: A0A177TJ72_9BASI (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Tilletia caries TaxID=13290 RepID=A0A177TJ72_9BASI)

HSP 1 Score: 90.9 bits (224), Expect = 3.980e-19
Identity = 41/103 (39.81%), Postives = 61/103 (59.22%), Query Frame = 0
Query:    1 MSEAQASSEWPQWKRAIAREMNGQIARGVWQVVECPKGKTVLGSRVVFKRKIDKDGRIEKYKCRLLAQGFRQVKGIHYDESSSPTPAQASIRMVLGMIAALGW 103
            + +A    +W  W  A+  EMN     G W + E P  ++V+GSR VFK K+D +G + +YK RL+AQGF QV G++Y+E+ SP     +IR +L + A   W
Sbjct:  293 LKDAMRRPDWSLWLEAMKEEMNSLTEMGTWVLEELPDNQSVVGSRWVFKLKLDSEGNVARYKARLVAQGFSQVAGVNYNETYSPVTRFVTIRTLLALAAHFDW 395          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig135177.2484.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A177U095_9BASI4.600e-2039.81Integrase catalytic domain-containing protein n=2 ... [more]
A0A177U1E5_9BASI6.300e-2037.25Integrase catalytic domain-containing protein n=2 ... [more]
A0A5C3E5T1_9BASI8.620e-2038.83Uncharacterized protein n=2 Tax=Ustilago trichopho... [more]
A0A177TL22_9BASI1.170e-1938.61Integrase catalytic domain-containing protein n=1 ... [more]
A0A1X7VXK3_AMPQE1.230e-1945.36Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A177T913_9BASI1.600e-1938.83Integrase catalytic domain-containing protein n=1 ... [more]
A0A177VQ04_9BASI2.970e-1938.83Integrase catalytic domain-containing protein n=2 ... [more]
A0A177U0N4_9BASI2.970e-1938.61Integrase catalytic domain-containing protein n=2 ... [more]
A0A401GQU1_9APHY3.000e-1940.78Uncharacterized protein n=3 Tax=Sparassis crispa T... [more]
A0A177TJ72_9BASI3.980e-1939.81Reverse transcriptase Ty1/copia-type domain-contai... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 29..102
e-value: 2.8E-16
score: 59.9
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 2..102
NoneNo IPR availablePANTHERPTHR11439:SF265coord: 2..102

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig135177contigH-elongata_contig135177:476..787 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig135177.2484.1mRNA_H-elongata_contig135177.2484.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig135177 8..799 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig135177.2484.1 ID=prot_H-elongata_contig135177.2484.1|Name=mRNA_H-elongata_contig135177.2484.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=104bp
MSEAQASSEWPQWKRAIAREMNGQIARGVWQVVECPKGKTVLGSRVVFKR
KIDKDGRIEKYKCRLLAQGFRQVKGIHYDESSSPTPAQASIRMVLGMIAA
LGW*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2
IPR039537Retrotran_Ty1/copia-like