prot_H-elongata_contig133841.2403.1 (polypeptide) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig133841.2403.1 vs. uniprot
Match: A0A6H5KAC2_9PHAE (Integrase catalytic domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAC2_9PHAE) HSP 1 Score: 77.8 bits (190), Expect = 7.060e-15 Identity = 41/81 (50.62%), Postives = 55/81 (67.90%), Query Frame = 0
Query: 2 RAELEGHDQTGTFSGQSVPAGVNVMTAKWIFSFKTDRDGFITRAKARLVARGFGPKYCVDYFETFAATPSVSSIKVAMAIA 82
R E G + GTF Q G NV++AKW++S+K D G+ RAKARLVARGF + VD+FETF+ PS++SI++ AIA
Sbjct: 1389 RKEFFGLNAVGTFEEQR---GTNVISAKWVYSWKGDEFGYAVRAKARLVARGFAQREGVDFFETFSPCPSITSIRLLAAIA 1466
BLAST of mRNA_H-elongata_contig133841.2403.1 vs. uniprot
Match: A0A6H5KBJ6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBJ6_9PHAE) HSP 1 Score: 76.3 bits (186), Expect = 2.450e-14 Identity = 40/81 (49.38%), Postives = 55/81 (67.90%), Query Frame = 0
Query: 2 RAELEGHDQTGTFSGQSVPAGVNVMTAKWIFSFKTDRDGFITRAKARLVARGFGPKYCVDYFETFAATPSVSSIKVAMAIA 82
R E G + GTF + G NV++AKW++S+K D G+ RAKARLVARGF + VD+FETF+ PS++SI++ AIA
Sbjct: 1271 RKEFFGLNAVGTFEER----GTNVISAKWVYSWKGDEFGYAVRAKARLVARGFAQREGVDFFETFSPCPSITSIRLLAAIA 1347
BLAST of mRNA_H-elongata_contig133841.2403.1 vs. uniprot
Match: A0A6H5JVD9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVD9_9PHAE) HSP 1 Score: 75.9 bits (185), Expect = 3.350e-14 Identity = 40/81 (49.38%), Postives = 54/81 (66.67%), Query Frame = 0
Query: 2 RAELEGHDQTGTFSGQSVPAGVNVMTAKWIFSFKTDRDGFITRAKARLVARGFGPKYCVDYFETFAATPSVSSIKVAMAIA 82
R E G + GTF Q G NV++AKW++S+K D G+ RAKARLVARGF + VD+ ETF+ PS++SI++ AIA
Sbjct: 1503 RKEFFGLNAVGTFEEQR---GTNVISAKWVYSWKGDEFGYAVRAKARLVARGFAQREVVDFVETFSPCPSITSIRLLAAIA 1580
BLAST of mRNA_H-elongata_contig133841.2403.1 vs. uniprot
Match: A0A6H5KMK9_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMK9_9PHAE) HSP 1 Score: 75.5 bits (184), Expect = 4.260e-14 Identity = 36/72 (50.00%), Postives = 51/72 (70.83%), Query Frame = 0
Query: 11 TGTFSGQSVPAGVNVMTAKWIFSFKTDRDGFITRAKARLVARGFGPKYCVDYFETFAATPSVSSIKVAMAIA 82
+ + G+ G NV++AKW+FS+K D G+ RAKARLVARGF + VD+FETF+ PS++SI++ AIA
Sbjct: 134 SSSHGGRDQARGTNVISAKWVFSWKRDEFGYAVRAKARLVARGFAQREGVDFFETFSPCPSITSIRLLAAIA 205
BLAST of mRNA_H-elongata_contig133841.2403.1 vs. uniprot
Match: A0A4Q6CQJ4_9GAMM (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Moraxellaceae bacterium TaxID=1889775 RepID=A0A4Q6CQJ4_9GAMM) HSP 1 Score: 69.3 bits (168), Expect = 2.130e-13 Identity = 33/81 (40.74%), Postives = 48/81 (59.26%), Query Frame = 0
Query: 1 MRAELEGHDQTGTFSGQSVPAGVNVMTAKWIFSFKTDRDGFITRAKARLVARGFGPKYCVDYFETFAATPSVSSIKVAMAI 81
+ EL HD T+ PA ++T KW+F+ K D+ G I R KARLVARGF + VD+++TFA + S++ +AI
Sbjct: 18 IAVELAAHDSNKTWIEVERPANARILTTKWVFALKRDKQGNIERHKARLVARGFEQRPGVDFYQTFAPVAKLESVRALLAI 98
BLAST of mRNA_H-elongata_contig133841.2403.1 vs. uniprot
Match: A0A6H5JV09_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV09_9PHAE) HSP 1 Score: 73.6 bits (179), Expect = 2.150e-13 Identity = 35/67 (52.24%), Postives = 49/67 (73.13%), Query Frame = 0
Query: 16 GQSVPAGVNVMTAKWIFSFKTDRDGFITRAKARLVARGFGPKYCVDYFETFAATPSVSSIKVAMAIA 82
G+ G NV++AKW++S+K D G+ RAKARLVARGF + VD+FETF+ PS++SI++ AIA
Sbjct: 814 GRDKARGTNVISAKWVYSWKGDEFGYAVRAKARLVARGFAQREGVDFFETFSPCPSITSIRLLAAIA 880
BLAST of mRNA_H-elongata_contig133841.2403.1 vs. uniprot
Match: A0A6H5JKW3_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKW3_9PHAE) HSP 1 Score: 71.6 bits (174), Expect = 8.580e-13 Identity = 40/82 (48.78%), Postives = 52/82 (63.41%), Query Frame = 0
Query: 1 MRAELEGHDQTGTFSGQS-VPAGVNVMTAKWIFSFKTDRDGFITRAKARLVARGFGPKYCVDYFETFAATPSVSSIKVAMAI 81
M EL+GH +TGTFS S +P G ++AKWIFS KT+ G I KAR+VARGF VD+ + +A PS SIK +A+
Sbjct: 220 MTKELDGHKKTGTFSEISGLPEGRKAISAKWIFSHKTNEKGLIVDFKARMVARGFSQIPGVDFHHSSSACPSAVSIKTMVAV 301
BLAST of mRNA_H-elongata_contig133841.2403.1 vs. uniprot
Match: A0A438DRH1_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438DRH1_VITVI) HSP 1 Score: 70.9 bits (172), Expect = 1.060e-12 Identity = 34/81 (41.98%), Postives = 50/81 (61.73%), Query Frame = 0
Query: 1 MRAELEGHDQTGTFSGQSVPAGVNVMTAKWIFSFKTDRDGFITRAKARLVARGFGPKYCVDYFETFAATPSVSSIKVAMAI 81
M+ E++ + G + +P GV +++ KWIF K D G I R KARLVA+GF K C+DY ETF++ S S ++ MA+
Sbjct: 188 MKEEMKSMKENGVWDLVELPEGVKLISCKWIFKTKRDSKGNIVRYKARLVAKGFTQKECIDYKETFSSVSSNDSFRIIMAL 268
BLAST of mRNA_H-elongata_contig133841.2403.1 vs. uniprot
Match: A0A8D8C7P3_CULPI (Copia protein (Fragment) n=1 Tax=Culex pipiens TaxID=7175 RepID=A0A8D8C7P3_CULPI) HSP 1 Score: 66.6 bits (161), Expect = 6.660e-12 Identity = 32/83 (38.55%), Postives = 50/83 (60.24%), Query Frame = 0
Query: 1 MRAELEGHDQTGTFSGQSVPAGVNVMTAKWIFSFKTDRDGFITRAKARLVARGFGPKYCVDYFETFAATPSVSSIKVAMAIAV 83
+R EL + T+ +P G V+T+KW+F K D++G + R KARLVARGF VDY +TFA +S+++ +A+ +
Sbjct: 57 VRDELNSLTENQTWDVVDLPRGAKVITSKWVFKKKVDKNGDLERLKARLVARGFQQTASVDYHDTFAPVAKLSTVRFLLAVGI 139
BLAST of mRNA_H-elongata_contig133841.2403.1 vs. uniprot
Match: A0A5N6LND4_9ASTR (Non-specific serine/threonine protein kinase n=1 Tax=Mikania micrantha TaxID=192012 RepID=A0A5N6LND4_9ASTR) HSP 1 Score: 69.3 bits (168), Expect = 6.710e-12 Identity = 33/80 (41.25%), Postives = 52/80 (65.00%), Query Frame = 0
Query: 4 ELEGHDQTGTFSGQSVPAGVNVMTAKWIFSFKTDRDGFITRAKARLVARGFGPKYCVDYFETFAATPSVSSIKVAMAIAV 83
E++ + T+ PAGVN++T KW++ K DG + R KARLVARGF KY +DY +TF+ +++I+V +A+A+
Sbjct: 521 EVQALQRNQTWELVPQPAGVNLVTCKWVYKVKRRADGSVDRFKARLVARGFSQKYGLDYEDTFSPVAKLTTIRVILAVAI 600 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig133841.2403.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-elongata_contig133841.2403.1 ID=prot_H-elongata_contig133841.2403.1|Name=mRNA_H-elongata_contig133841.2403.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=83bpback to top |