prot_H-elongata_contig1335.2378.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig1335.2378.1
Unique Nameprot_H-elongata_contig1335.2378.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length155
Homology
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BLAST of mRNA_H-elongata_contig1335.2378.1 vs. uniprot
Match: D8LP12_ECTSI (Dynein regulatory complex protein 10 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LP12_ECTSI)

HSP 1 Score: 185 bits (470), Expect = 4.550e-54
Identity = 96/135 (71.11%), Postives = 114/135 (84.44%), Query Frame = 0 
Query:    2 RSLTERIERLSKETGEAVELHQHEEMGSRKKKTKMETELAVTVAKYDSEMTAKSAQIDDIKGKIEKELQELVVLQDHFDRVDASGRQEWAEEDILAKVKMKVARGIAVVDGAATKLQSLFRGNRDRVEYYKAKKK 136
            R+LTERIERL+KETGEA ELHQ EE  SRKKK K+E EL  TV KYD +MTAK+AQI++IK K+E+E QEL +LQDHFDRVDASGRQ+WAEE+ LA V+ KVAR + +VDGAATK+Q++FRG RDR EY KAKKK
Sbjct:  296 RALTERIERLAKETGEAAELHQQEETASRKKKAKVEVELTATVGKYDRDMTAKTAQIEEIKAKMEEERQELAILQDHFDRVDASGRQQWAEEETLAVVRGKVARAMGIVDGAATKIQAMFRGGRDRAEYQKAKKK 430
[Close]
BLAST of mRNA_H-elongata_contig1335.2378.1 vs. uniprot
Match: UPI001BF71AED (dynein regulatory complex protein 10 n=2 Tax=Alosa TaxID=34772 RepID=UPI001BF71AED)

HSP 1 Score: 57.0 bits (136), Expect = 1.340e-6
Identity = 35/102 (34.31%), Postives = 57/102 (55.88%), Query Frame = 0 
Query:   26 EMGSRKKKTKMETELAVTVAKYDSEMTAKSAQIDDIKGKIEKELQELVVLQDHFDRVDASGRQEWAEEDILAKVKMKVARGIAVVDGAATKLQSLFRGNRDR 127
            EMG RK+K K+ETE+   + KYDS+M  K  +++D+    E+E +EL  L++H+  ++    Q   E  +  +      R   V+  AAT +Q+ +RG R R
Sbjct:  290 EMGLRKRKYKVETEIENWIQKYDSDMGEKQTELEDMAEVFEEEKEELRELEEHYSMLEVEYTQVMEERRLEQQXXXXXERAREVMGRAATVIQAYWRGFRVR 391
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig1335.2378.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LP12_ECTSI4.550e-5471.11Dynein regulatory complex protein 10 n=2 Tax=Ectoc... [more]
UPI001BF71AED1.340e-634.31dynein regulatory complex protein 10 n=2 Tax=Alosa... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR31598FAMILY NOT NAMEDcoord: 4..153
IPR000048IQ motif, EF-hand binding sitePROSITEPS50096IQcoord: 111..139
score: 8.535

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig1335contigH-elongata_contig1335:14452..15517 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig1335.2378.1mRNA_H-elongata_contig1335.2378.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig1335 14452..15517 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig1335.2378.1 ID=prot_H-elongata_contig1335.2378.1|Name=mRNA_H-elongata_contig1335.2378.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=155bp
IRSLTERIERLSKETGEAVELHQHEEMGSRKKKTKMETELAVTVAKYDSE
MTAKSAQIDDIKGKIEKELQELVVLQDHFDRVDASGRQEWAEEDILAKVK
MKVARGIAVVDGAATKLQSLFRGNRDRVEYYKAKKKAKKGAKKGKKGKKK
GKKK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000048IQ_motif_EF-hand-BS