prot_H-elongata_contig13331.2366.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig13331.2366.1
Unique Nameprot_H-elongata_contig13331.2366.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length102
Homology
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BLAST of mRNA_H-elongata_contig13331.2366.1 vs. uniprot
Match: D8LFE3_ECTSI (Abortive infection protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LFE3_ECTSI)

HSP 1 Score: 91.3 bits (225), Expect = 1.440e-19
Identity = 43/60 (71.67%), Postives = 54/60 (90.00%), Query Frame = 0 
Query:   37 RELQLGLRTFGKFASNEKTRQIMQKADLDESNALTFDEWMRLLALNYSALFKAIKSEKLG 96
            +ELQLGLRTFGKFAS E+TRQIM++ADLD++NALTFDEW+RLLALNYSAL +    +++G
Sbjct:  331 KELQLGLRTFGKFASAEETRQIMREADLDKNNALTFDEWVRLLALNYSALLQPKAGKQIG 390
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BLAST of mRNA_H-elongata_contig13331.2366.1 vs. uniprot
Match: A0A836CHD9_9STRA (CAAX protease self-immunity-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHD9_9STRA)

HSP 1 Score: 50.8 bits (120), Expect = 3.850e-5
Identity = 21/43 (48.84%), Postives = 35/43 (81.40%), Query Frame = 0 
Query:   37 RELQLGLRTFGKFASNEKTRQIMQKADLDESNALTFDEWMRLL 79
            RELQLG+RTFG+F ++E+   I ++ADL++   ++FDE+++LL
Sbjct:  282 RELQLGVRTFGRFTNDEQLDAIYKRADLNQDGEISFDEFLKLL 324
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig13331.2366.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LFE3_ECTSI1.440e-1971.67Abortive infection protein n=2 Tax=Ectocarpus TaxI... [more]
A0A836CHD9_9STRA3.850e-548.84CAAX protease self-immunity-domain-containing prot... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.238.10coord: 36..95
e-value: 6.9E-7
score: 31.0
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 63..75
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 50..85
score: 9.297
IPR011992EF-hand domain pairSUPERFAMILY47473EF-handcoord: 38..86

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig13331contigH-elongata_contig13331:3573..4280 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig13331.2366.1mRNA_H-elongata_contig13331.2366.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig13331 2803..4461 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig13331.2366.1 ID=prot_H-elongata_contig13331.2366.1|Name=mRNA_H-elongata_contig13331.2366.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=102bp
MFVRCLHDHKLFLSPYLPGSEENVSVCCRPVSLSLNRELQLGLRTFGKFA
SNEKTRQIMQKADLDESNALTFDEWMRLLALNYSALFKAIKSEKLGNELA
P*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018247EF_Hand_1_Ca_BS
IPR002048EF_hand_dom
IPR011992EF-hand-dom_pair