prot_H-elongata_contig133242.2362.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig133242.2362.1
Unique Name	prot_H-elongata_contig133242.2362.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	123

Homology

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BLAST of mRNA_H-elongata_contig133242.2362.1 vs. uniprot
Match: D8LCY7_ECTSI (Long-chain-fatty-acid--CoA ligase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCY7_ECTSI)

HSP 1 Score: 213 bits (542), Expect = 1.940e-63
Identity = 94/118 (79.66%), Postives = 104/118 (88.14%), Query Frame = 0

Query:    1 MGQKDDFSAGHVGGPFSCTEICLKDVPEMGYRHTDTWHGGDPRDAEGGGIPCDGRGEVCFRGGNIFVGYYKKEDKTREAFDEDGWLLSGDIGLWTPEGTLKIIDRKKNIFKLSQVQSV 118
            M Q  DFS GHVGGPFSCTEICLKDVPEMGYRHTDTWHGGDPRDA GGG  C+GRGE+CFRG N+FVGYYK ++KTREAFDE+GWL+SGDIG+W  +G LKIIDRKKNIFKLSQ + V
Sbjct:  404 MTQSGDFSVGHVGGPFSCTEICLKDVPEMGYRHTDTWHGGDPRDAGGGGEACEGRGEICFRGCNVFVGYYKDDEKTREAFDENGWLMSGDIGMWNLDGALKIIDRKKNIFKLSQGEYV 521

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BLAST of mRNA_H-elongata_contig133242.2362.1 vs. uniprot
Match: A0A835ZFW5_9STRA (Long chain acyl-CoA synthetase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFW5_9STRA)

HSP 1 Score: 194 bits (494), Expect = 3.550e-56
Identity = 85/109 (77.98%), Postives = 92/109 (84.40%), Query Frame = 0

Query:    6 DFSAGHVGGPFSCTEICLKDVPEMGYRHTDTWHGGDPRDAEGGGIPCDGRGEVCFRGGNIFVGYYKKEDKTREAFDEDGWLLSGDIGLWTPEGTLKIIDRKKNIFKLSQ 114
            DFSAGHVGGPF CTEICL DVPEMGY HTD+WHGGDPR+  GGG PC GRGE+CFRG N+F GYYK  +KT EA D DGWL SGDIGLWT +G L+IIDRKKNIFKLSQ
Sbjct:  452 DFSAGHVGGPFPCTEICLMDVPEMGYLHTDSWHGGDPREGGGGGEPCAGRGEICFRGTNVFAGYYKDPEKTAEAIDADGWLHSGDIGLWTADGALRIIDRKKNIFKLSQ 560

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BLAST of mRNA_H-elongata_contig133242.2362.1 vs. uniprot
Match: A0A7S2SDD9_9STRA (Long-chain-fatty-acid--CoA ligase n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SDD9_9STRA)

HSP 1 Score: 158 bits (399), Expect = 8.280e-43
Identity = 74/113 (65.49%), Postives = 83/113 (73.45%), Query Frame = 0

Query:    6 DFSAGHVGGPFSCTEICLKDVPEMGYRHTDTWHGGDPRDAEGGGIPCDGRGEVCFRGGNIFVGYYKKEDKTREAFDEDGWLLSGDIGLWTPEGTLKIIDRKKNIFKLSQVQSV 118
            DFS+GHVG P  C EI L DVP+MGYRHTDTWHGGD       G+PC GRGE+ +RG   F GYYK  +KT E  D+DGWL SGDIGLWT  G LKIIDRKKNIFKL+Q + V
Sbjct:  429 DFSSGHVGPPVPCVEIKLIDVPDMGYRHTDTWHGGDQD-----GMPCVGRGEIVYRGPVAFTGYYKMPEKTAETIDKDGWLYSGDIGLWTLSGNLKIIDRKKNIFKLAQGEYV 536

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BLAST of mRNA_H-elongata_contig133242.2362.1 vs. uniprot
Match: B8CBL9_THAPS (Long-chain-fatty-acid--CoA ligase n=2 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CBL9_THAPS)

HSP 1 Score: 153 bits (386), Expect = 5.510e-41
Identity = 71/114 (62.28%), Postives = 82/114 (71.93%), Query Frame = 0

Query:    5 DDFSAGHVGGPFSCTEICLKDVPEMGYRHTDTWHGGDPRDAEGGGIPCDGRGEVCFRGGNIFVGYYKKEDKTREAFDEDGWLLSGDIGLWTPEGTLKIIDRKKNIFKLSQVQSV 118
            D  S GHVGGP  C EI L+DVPEMGY  TDT H G+P         C GRGE+C RG N+F GYYK E+KT+E  DE+GWL SGD+GLW P+G LKIIDRKKNIFKL+Q + V
Sbjct:  435 DIASVGHVGGPTDCVEIVLEDVPEMGYLSTDTSHNGEP---------CRGRGEICIRGPNVFKGYYKDEEKTKETIDEEGWLHSGDVGLWMPDGQLKIIDRKKNIFKLAQGEYV 539

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BLAST of mRNA_H-elongata_contig133242.2362.1 vs. uniprot
Match: A0A7S1VYZ7_9STRA (Long-chain-fatty-acid--CoA ligase (Fragment) n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1VYZ7_9STRA)

HSP 1 Score: 152 bits (385), Expect = 7.860e-41
Identity = 74/119 (62.18%), Postives = 84/119 (70.59%), Query Frame = 0

Query:    1 MGQKDDF-SAGHVGGPFSCTEICLKDVPEMGYRHTDTWHGGDPRDAEGGGIPCDGRGEVCFRGGNIFVGYYKKEDKTREAFDEDGWLLSGDIGLWTPEGTLKIIDRKKNIFKLSQVQSV 118
            +G KDDF S GHVGGP +  EI L DVPEMGY HTDT H G P         C GRGE+C RG N+F GYYK E+KTRE  DE+GWL SGD+GLWT  G L+IIDRKKNIFKL+  + V
Sbjct:  439 IGDKDDFASIGHVGGPTAAVEIVLMDVPEMGYLHTDTSHQGQP---------CRGRGEICVRGPNVFKGYYKDEEKTRETIDEEGWLHSGDVGLWTLNGQLRIIDRKKNIFKLANGEYV 548

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BLAST of mRNA_H-elongata_contig133242.2362.1 vs. uniprot
Match: A0A7S2L9H9_9STRA (Long-chain-fatty-acid--CoA ligase n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2L9H9_9STRA)

HSP 1 Score: 152 bits (384), Expect = 1.080e-40
Identity = 72/115 (62.61%), Postives = 82/115 (71.30%), Query Frame = 0

Query:    4 KDDFSAGHVGGPFSCTEICLKDVPEMGYRHTDTWHGGDPRDAEGGGIPCDGRGEVCFRGGNIFVGYYKKEDKTREAFDEDGWLLSGDIGLWTPEGTLKIIDRKKNIFKLSQVQSV 118
            +D  + GHVGGP  C EI L DVPEMGY HTDT H G+P         C GRGE+  RG  +F GYY  EDKT+E  DEDGWLLSGDIGLWTP+G L+IIDRKKNIFKL+Q + V
Sbjct:  436 EDMSTVGHVGGPVECVEIVLADVPEMGYMHTDTLHRGEP---------CCGRGEILVRGPAVFKGYYNDEDKTKETVDEDGWLLSGDIGLWTPQGQLQIIDRKKNIFKLAQGEYV 541

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BLAST of mRNA_H-elongata_contig133242.2362.1 vs. uniprot
Match: A0A7S1ZHK7_TRICV (Long-chain-fatty-acid--CoA ligase n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZHK7_TRICV)

HSP 1 Score: 150 bits (379), Expect = 2.680e-40
Identity = 73/119 (61.34%), Postives = 84/119 (70.59%), Query Frame = 0

Query:    1 MGQKDDF-SAGHVGGPFSCTEICLKDVPEMGYRHTDTWHGGDPRDAEGGGIPCDGRGEVCFRGGNIFVGYYKKEDKTREAFDEDGWLLSGDIGLWTPEGTLKIIDRKKNIFKLSQVQSV 118
            +G  DD  S GHVGGP    EI L DVPEMGY HTDT HGG P         C GRGE+  RG N+F GYYK E+KT+E  +E+GWL+SGD+GLWTP+G L IIDRKKNIFKLSQ + V
Sbjct:  342 LGADDDMGSIGHVGGPLDHLEILLADVPEMGYLHTDTSHGGRP---------CCGRGEIWIRGPNVFKGYYKDEEKTKETINEEGWLMSGDVGLWTPQGQLMIIDRKKNIFKLSQGEYV 451

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BLAST of mRNA_H-elongata_contig133242.2362.1 vs. uniprot
Match: A0A7S2MGH8_9STRA (Long-chain-fatty-acid--CoA ligase n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2MGH8_9STRA)

HSP 1 Score: 150 bits (378), Expect = 7.440e-40
Identity = 71/114 (62.28%), Postives = 81/114 (71.05%), Query Frame = 0

Query:    5 DDFSAGHVGGPFSCTEICLKDVPEMGYRHTDTWHGGDPRDAEGGGIPCDGRGEVCFRGGNIFVGYYKKEDKTREAFDEDGWLLSGDIGLWTPEGTLKIIDRKKNIFKLSQVQSV 118
            D  S GHVGGP +  EI L DVPEMGY HTDT H G P         C GRGE+C RG N+F GYYK E+KTRE  DE+GWL SGD+GLWTP+G L+IIDRKKNIFKL+  + V
Sbjct:  436 DMTSVGHVGGPTNVVEIVLIDVPEMGYLHTDTSHQGKP---------CRGRGEICIRGPNVFKGYYKDEEKTRETIDEEGWLHSGDVGLWTPDGQLRIIDRKKNIFKLANGEYV 540

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BLAST of mRNA_H-elongata_contig133242.2362.1 vs. uniprot
Match: A0A812X550_SYMPI (ACSL6 protein n=1 Tax=Symbiodinium pilosum TaxID=2952 RepID=A0A812X550_SYMPI)

HSP 1 Score: 142 bits (359), Expect = 1.200e-39
Identity = 69/114 (60.53%), Postives = 79/114 (69.30%), Query Frame = 0

Query:    5 DDFSAGHVGGPFSCTEICLKDVPEMGYRHTDTWHGGDPRDAEGGGIPCDGRGEVCFRGGNIFVGYYKKEDKTREAFDEDGWLLSGDIGLWTPEGTLKIIDRKKNIFKLSQVQSV 118
            DD + G VG   +C EI LKDVP+MGY  TD  H    +      IPC GRGE+CF+G NIF GYYK  DKT EA D DGW  SGDIG+WTP+G LKIIDRKKNIFKL+Q + V
Sbjct:  123 DDLAPGTVGAVLACNEIRLKDVPDMGYLRTDQVHKIGSKT-----IPCHGRGEICFKGLNIFQGYYKMPDKTAEAIDADGWFHSGDIGMWTPDGRLKIIDRKKNIFKLAQGEYV 231

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BLAST of mRNA_H-elongata_contig133242.2362.1 vs. uniprot
Match: A0A7S1V9E3_9STRA (Long-chain-fatty-acid--CoA ligase n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1V9E3_9STRA)

HSP 1 Score: 148 bits (373), Expect = 1.370e-39
Identity = 74/115 (64.35%), Postives = 80/115 (69.57%), Query Frame = 0

Query:    5 DDF-SAGHVGGPFSCTEICLKDVPEMGYRHTDTWHGGDPRDAEGGGIPCDGRGEVCFRGGNIFVGYYKKEDKTREAFDEDGWLLSGDIGLWTPEGTLKIIDRKKNIFKLSQVQSV 118
            DDF S GHVGGP   TE+ L DVPEMGY HTDT H G P         C GRGE+  RG N+F GYYK E KT+E  DEDGWL SGDIGLWT  G L+IIDRKKNIFKLSQ + V
Sbjct:  316 DDFASVGHVGGPTGATEVMLVDVPEMGYLHTDTDHRGQP---------CQGRGEIWIRGPNVFKGYYKDEVKTKETLDEDGWLKSGDIGLWTMSGCLQIIDRKKNIFKLSQGEYV 421

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig133242.2362.1 vs. uniprot

BLAST of mRNA_H-elongata_contig133242.2362.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D8LCY7_ECTSI	1.940e-63	79.66	Long-chain-fatty-acid--CoA ligase n=1 Tax=Ectocarp...	[more]
A0A835ZFW5_9STRA	3.550e-56	77.98	Long chain acyl-CoA synthetase n=1 Tax=Tribonema m...	[more]
A0A7S2SDD9_9STRA	8.280e-43	65.49	Long-chain-fatty-acid--CoA ligase n=1 Tax=Rhizochr...	[more]
B8CBL9_THAPS	5.510e-41	62.28	Long-chain-fatty-acid--CoA ligase n=2 Tax=Thalassi...	[more]
A0A7S1VYZ7_9STRA	7.860e-41	62.18	Long-chain-fatty-acid--CoA ligase (Fragment) n=1 T...	[more]
A0A7S2L9H9_9STRA	1.080e-40	62.61	Long-chain-fatty-acid--CoA ligase n=1 Tax=Leptocyl...	[more]
A0A7S1ZHK7_TRICV	2.680e-40	61.34	Long-chain-fatty-acid--CoA ligase n=1 Tax=Trieres ...	[more]
A0A7S2MGH8_9STRA	7.440e-40	62.28	Long-chain-fatty-acid--CoA ligase n=1 Tax=Helicoth...	[more]
A0A812X550_SYMPI	1.200e-39	60.53	ACSL6 protein n=1 Tax=Symbiodinium pilosum TaxID=2...	[more]
A0A7S1V9E3_9STRA	1.370e-39	64.35	Long-chain-fatty-acid--CoA ligase n=1 Tax=Grammato...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR042099	AMP-dependent synthetase-like superfamily	GENE3D	3.40.50.12780		coord: 9..107 e-value: 2.1E-19 score: 71.3
IPR000873	AMP-dependent synthetase/ligase	PFAM	PF00501	AMP-binding	coord: 4..113 e-value: 1.1E-23 score: 83.5
None	No IPR available	PANTHER	PTHR43272	FAMILY NOT NAMED	coord: 4..116
None	No IPR available	SUPERFAMILY	56801	Acetyl-CoA synthetase-like	coord: 6..112

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig133242	contig	H-elongata_contig133242:258..1410 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig133242.2362.1	mRNA_H-elongata_contig133242.2362.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig133242 22..1443 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig133242.2362.1 ID=prot_H-elongata_contig133242.2362.1|Name=mRNA_H-elongata_contig133242.2362.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=123bp
MGQKDDFSAGHVGGPFSCTEICLKDVPEMGYRHTDTWHGGDPRDAEGGGI
PCDGRGEVCFRGGNIFVGYYKKEDKTREAFDEDGWLLSGDIGLWTPEGTL
KIIDRKKNIFKLSQVQSVIDHE*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR042099	AMP-dep_Synthh-like_sf
IPR000873	AMP-dep_Synth/Lig