prot_H-elongata_contig13257.2327.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig13257.2327.1
Unique Nameprot_H-elongata_contig13257.2327.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length230
Homology
BLAST of mRNA_H-elongata_contig13257.2327.1 vs. uniprot
Match: D7FH74_ECTSI (Cyclin N-terminal domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH74_ECTSI)

HSP 1 Score: 203 bits (517), Expect = 4.580e-61
Identity = 101/181 (55.80%), Postives = 133/181 (73.48%), Query Frame = 0
Query:    4 EVTQFSADQADVFDDKYFA---FRYTFMQPPIMAIPGQLCVVKDT---PVPATVEEVYEFIKGLFVKTYLSSECSVICLIYIERLMQMARVPLLESTWRPIIFCALLLASKMWQDLGSWNGEFSAAYPDYKIKSIDKLEMRFLEALEWDLNVSSSLYAKYYFALRSKSGVIPFRRRYQAIL 178
            EV  F+A  A+ FD++ F     RY FM  P MA+PG +  +++    P   TV+E+YEFIK LF K  LSSECS++CLIY+ERLM+ ARVPLL  TW+P++ C LLLASK+WQDL SWN EFS  YP+Y +K+I++LE+ FL A++WD+++SSSLYAKYYFALRS +    FRRRY  +L
Sbjct:  120 EVHGFNAKMAEAFDEQQFVSPTLRYNFMHAPTMALPGVMFTLREVRSPPKAPTVDEIYEFIKTLFNKAQLSSECSLVCLIYVERLMETARVPLLPGTWKPVLLCGLLLASKVWQDLSSWNVEFSTVYPEYSLKNINRLELLFLGAMKWDMSISSSLYAKYYFALRSLTEKEDFRRRYNRVL 300          
BLAST of mRNA_H-elongata_contig13257.2327.1 vs. uniprot
Match: A0A6H5JJI4_9PHAE (Cyclin N-terminal domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJI4_9PHAE)

HSP 1 Score: 206 bits (524), Expect = 1.340e-59
Identity = 103/181 (56.91%), Postives = 134/181 (74.03%), Query Frame = 0
Query:    4 EVTQFSADQADVFDDKYFA---FRYTFMQPPIMAIPGQLCVVKDT---PVPATVEEVYEFIKGLFVKTYLSSECSVICLIYIERLMQMARVPLLESTWRPIIFCALLLASKMWQDLGSWNGEFSAAYPDYKIKSIDKLEMRFLEALEWDLNVSSSLYAKYYFALRSKSGVIPFRRRYQAIL 178
            EV  F+A  A+VFD++ F     RY FM  P MA+PG +  +++    P   TV+E+YEFIK LF K  LSSECS++CLIY+ERLM+ ARVPLL  TW+P++ C LLLASK+WQDL SWN EFS  YP+Y +KSI++LE+ FL A++WD+++SSSLYAKYYFALRS +    FRRRY  +L
Sbjct:  368 EVHGFNAKMAEVFDEQQFVSPTLRYNFMHAPTMALPGVMFTLREVRSPPKAPTVDEIYEFIKTLFNKAQLSSECSLVCLIYVERLMETARVPLLPGTWKPVLLCGLLLASKVWQDLSSWNVEFSTVYPEYSLKSINRLELLFLGAMKWDMSISSSLYAKYYFALRSLTEKEDFRRRYNRVL 548          
BLAST of mRNA_H-elongata_contig13257.2327.1 vs. uniprot
Match: A0A835YNR4_9STRA (Cyclin N-terminal domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNR4_9STRA)

HSP 1 Score: 170 bits (431), Expect = 1.520e-46
Identity = 93/199 (46.73%), Postives = 132/199 (66.33%), Query Frame = 0
Query:    8 FSADQADVFDDKYFA---FRYTFMQPPIMAIPGQL-------CVVKDTPVPATVEEVYEFIKGLFVKTYLSSECSVICLIYIERLMQMARVPLLESTWRPIIFCALLLASKMWQDLGSWNGEFSAAYPDYKIKSIDKLEMRFLEALEWDLNVSSSLYAKYYFALRSKSGVIPFRRRYQAILLQVERDALLCDGVAKDKL 196
            F   +AD+F ++++    +R TF++   +   G L         V+  P   +VE +YEFI+ LF +  LSSECS++CLIYIERLM++A VPLL +TW+P++ C LLLASK+WQDL SWN EFS  YP++ ++SI++LE  +L  ++WDL +S+SLYAKYYFALRS +    FRRRY  +   V+ DA   D V +  L
Sbjct:  307 FDPAKADLFHERHYVSPRYRCTFVR--ALGAAGALPCSAFAMAKVETEPTAPSVEAIYEFIRTLFNRACLSSECSLVCLIYIERLMEVAAVPLLATTWKPVVLCGLLLASKVWQDLSSWNVEFSTVYPEFSLRSINRLEHVYLAQVQWDLYISASLYAKYYFALRSLAEGRDFRRRYNCV---VQIDAPRADRVQERSL 500          
BLAST of mRNA_H-elongata_contig13257.2327.1 vs. uniprot
Match: A0A7S1G1W2_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1G1W2_9STRA)

HSP 1 Score: 159 bits (402), Expect = 6.270e-46
Identity = 75/135 (55.56%), Postives = 100/135 (74.07%), Query Frame = 0
Query:   44 DTPVPATVEEVYEFIKGLFVKTYLSSECSVICLIYIERLMQMARVPLLESTWRPIIFCALLLASKMWQDLGSWNGEFSAAYPDYKIKSIDKLEMRFLEALEWDLNVSSSLYAKYYFALRSKSGVIPFRRRYQAIL 178
            D P P T EE+Y F + LF K  LS+ECS++CL+Y+ERLM++A + LL + WRPI+ C +L+ASK+WQDL SWN EFS  YP Y + S+++LE  FL+ L WDL +S S+YAKYYFALRS S    FRRRY +++
Sbjct:    5 DYPAP-TAEEIYNFARHLFTKAQLSAECSIVCLVYVERLMEVAGLLLLGTNWRPILLCGMLMASKVWQDLSSWNVEFSTVYPQYSLASVNRLERAFLQTLRWDLYISGSVYAKYYFALRSMSEKKNFRRRYISMM 138          
BLAST of mRNA_H-elongata_contig13257.2327.1 vs. uniprot
Match: A0A1E7FWS6_9STRA (Uncharacterized protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FWS6_9STRA)

HSP 1 Score: 161 bits (408), Expect = 4.530e-45
Identity = 89/176 (50.57%), Postives = 117/176 (66.48%), Query Frame = 0
Query:    8 FSADQADVF-DDKYFAFRYTFMQPPI-MAIPGQLCVVKDTPVPATVE---EVYEFIKGLFVKTYLSSECSVICLIYIERLMQMARVPLLESTWRPIIFCALLLASKMWQDLGSWNGEFSAAYPDYKIKSIDKLEMRFLEALEWDLNVSSSLYAKYYFALRSKSGVIPFRRRYQAIL 178
            F A   D+F +D Y    Y      I MA PG +  ++   V   +    E+Y+F + LF    LSSECS++CLIY+ERLM++A+VPLL  TWRPI  CALLLASK+WQDL SWN EFS+ YP + ++SI+KLE+ FL  ++WDL +SSS YAKYYFALRS      FR+RY  ++
Sbjct:   98 FHASMRDIFNEDCYRTPTYKCHMARIPMARPGMVYGLRKVQVMYRIPSETEIYDFAQQLFQSVQLSSECSIVCLIYVERLMEIAKVPLLACTWRPIFMCALLLASKVWQDLSSWNIEFSSVYPQFSLESINKLELNFLRNVKWDLYISSSSYAKYYFALRSLVEKQDFRQRYNRMV 273          
BLAST of mRNA_H-elongata_contig13257.2327.1 vs. uniprot
Match: B8BQF5_THAPS (Cyclin N-terminal domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BQF5_THAPS)

HSP 1 Score: 166 bits (421), Expect = 9.820e-44
Identity = 88/180 (48.89%), Postives = 125/180 (69.44%), Query Frame = 0
Query:    8 FSADQADVFDDKYFA---FRYTFMQPPIMAIPG------QLCVVKDTPVPATVEEVYEFIKGLFVKTYLSSECSVICLIYIERLMQMARVPLLESTWRPIIFCALLLASKMWQDLGSWNGEFSAAYPDYKIKSIDKLEMRFLEALEWDLNVSSSLYAKYYFALRSKSGVIPFRRRYQAIL 178
            F +   D+F +  FA   ++ + ++ P MA PG      ++ VV +TP   + +E+YEF   LF K  LSSECS++CLIY+E+LM++A+VPL+ STWRPI  C LLLASK+WQDL SWN EF+  YP + + +I++LE++FL+ ++WDL +SSSLYAKYYFALRS      FR RY  ++
Sbjct:  669 FKSSMRDLFSEDNFATPRYKCSMVRVP-MARPGVVYSMRKIRVVYNTP---STDEIYEFAHQLFKKVQLSSECSIVCLIYVEKLMEVAKVPLVRSTWRPIFMCGLLLASKVWQDLSSWNIEFAGVYPQFSLDAINRLEVQFLKCIKWDLYISSSLYAKYYFALRSLLEKSGFRDRYNQMV 844          
BLAST of mRNA_H-elongata_contig13257.2327.1 vs. uniprot
Match: A0A7S2A727_9STRA (Hypothetical protein n=3 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2A727_9STRA)

HSP 1 Score: 166 bits (419), Expect = 1.170e-43
Identity = 89/176 (50.57%), Postives = 113/176 (64.20%), Query Frame = 0
Query:    8 FSADQADVFDDKYFAF-RYTFMQPPI-MAIPGQLCVVKDTPVPATV---EEVYEFIKGLFVKTYLSSECSVICLIYIERLMQMARVPLLESTWRPIIFCALLLASKMWQDLGSWNGEFSAAYPDYKIKSIDKLEMRFLEALEWDLNVSSSLYAKYYFALRSKSGVIPFRRRYQAIL 178
            F +   D F +  FA  RY    P + MA PG +C  +   V  T+    E+YEF   LF    LSSECS++CLIY+ERLM+M +VPLL  TWRPI  C LLLASK+WQDL SWN EF+  YP Y + +I++LE  FL  ++W+L +SSSLYAKYYFALRS      FR RY  ++
Sbjct:  552 FLSSMKDAFSEDRFATPRYKCSMPRVPMARPGLICAQRQIRVKHTIPTSNEIYEFAHQLFKAVQLSSECSIVCLIYVERLMEMGKVPLLACTWRPIFMCGLLLASKVWQDLSSWNIEFALVYPQYSVDAINRLEKLFLSKVKWELYISSSLYAKYYFALRSLLEKQDFRNRYNRMV 727          
BLAST of mRNA_H-elongata_contig13257.2327.1 vs. uniprot
Match: A0A7S4J8M4_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4J8M4_9STRA)

HSP 1 Score: 166 bits (420), Expect = 1.660e-43
Identity = 90/177 (50.85%), Postives = 119/177 (67.23%), Query Frame = 0
Query:    8 FSADQADVFDDKYFA---FRYTFMQPPIMAIPGQ---LCVVKDTPVPATVEEVYEFIKGLFVKTYLSSECSVICLIYIERLMQMARVPLLESTWRPIIFCALLLASKMWQDLGSWNGEFSAAYPDYKIKSIDKLEMRFLEALEWDLNVSSSLYAKYYFALRSKSGVIPFRRRYQAIL 178
            F  D  D+F +  F    ++ + ++ P MA PG    L  +KD     T  E+YEF   LF    LSSECS++CLIYIERLM++ARVPL+ STWRP+  C LLLASK+WQDL SWN EF++ YP + +++I++LE  FL  ++WDL +SSSLYAKYYFALRS      FRRRY  ++
Sbjct:  899 FLPDMRDLFAESNFVTPRYKCSLVRLP-MARPGAVYGLRRIKDDCSAPTTNEIYEFGHRLFKSVQLSSECSIVCLIYIERLMEVARVPLVSSTWRPVFMCGLLLASKVWQDLSSWNIEFASVYPQFSLEAINRLEATFLRTVKWDLYISSSLYAKYYFALRSLLEKQDFRRRYNRMV 1074          
BLAST of mRNA_H-elongata_contig13257.2327.1 vs. uniprot
Match: A0A4D9CTG4_9STRA (CYCLIN domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CTG4_9STRA)

HSP 1 Score: 162 bits (409), Expect = 2.100e-43
Identity = 87/183 (47.54%), Postives = 121/183 (66.12%), Query Frame = 0
Query:    4 EVTQFSADQADVFDDKYFA---FRYTFMQPPIMAIPGQLCVVKDTPVP---ATVEEVYEFIKGLFVKTYLSSECSVICLIYIERLMQMARVPLLESTWRPIIFCALLLASKMWQDLGSWNGEFSAAYPDYKIKSIDKLEMRFLEALEWDLNVSSSLYAKYYFALRSKSGVIPFRRRYQAILLQ 180
            E+  F   +  +F ++ F    + Y F++ PI A PG    +K    P    ++ E+Y F++ LF K  LSSEC+++CLIY+ERLM++A VPL+  TWR I+ C LLLASK+WQDL SWN EFS  +P + ++SI++LE  F+  L+WDL +SSSLYAKYYFALRS       RRRY A +L+
Sbjct:  276 EIKMFDRTKMKLFREEEFVSPQYLYRFVRVPI-ARPGICYSMKQIKTPYHLPSLHEIYHFLRTLFKKAALSSECALVCLIYVERLMEVAHVPLVAITWRAIVLCGLLLASKVWQDLPSWNVEFSQIFPQFSLQSINRLERLFINQLKWDLYISSSLYAKYYFALRSLYEQKDIRRRYNAFVLE 457          
BLAST of mRNA_H-elongata_contig13257.2327.1 vs. uniprot
Match: A0A3R7FYU9_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7FYU9_9STRA)

HSP 1 Score: 157 bits (398), Expect = 3.720e-43
Identity = 82/167 (49.10%), Postives = 115/167 (68.86%), Query Frame = 0
Query:   14 DVFDDKYFA---FRYTFMQPPI---MAIPGQLCVVKDTPVPATVEEVYEFIKGLFVKTYLSSECSVICLIYIERLMQMARVPLLESTWRPIIFCALLLASKMWQDLGSWNGEFSAAYPDYKIKSIDKLEMRFLEALEWDLNVSSSLYAKYYFALRSKSGVIPFRRRY 174
            + F +++F    ++YTF++ P    + +     +     VP+ V+E++ F K LF K  LS+EC+++CLIYIERLM+ A VPLL +TWRPI+ C LLLASK+WQDL SWN E S  YP + + SI++LE  FL  ++WDL +S+S+YAKYYFALRS +    FRRRY
Sbjct:  151 ETFREEHFVTPQYKYTFVRLPRVHPLTVYRMEKITSKHHVPS-VDEIFRFCKNLFNKAQLSAECTIVCLIYIERLMEQANVPLLAATWRPIVVCGLLLASKVWQDLSSWNVEISNIYPQFSLHSINRLERLFLHHIQWDLYISASVYAKYYFALRSLTEKKDFRRRY 316          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig13257.2327.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FH74_ECTSI4.580e-6155.80Cyclin N-terminal domain-containing protein n=1 Ta... [more]
A0A6H5JJI4_9PHAE1.340e-5956.91Cyclin N-terminal domain-containing protein n=1 Ta... [more]
A0A835YNR4_9STRA1.520e-4646.73Cyclin N-terminal domain-containing protein n=1 Ta... [more]
A0A7S1G1W2_9STRA6.270e-4655.56Hypothetical protein n=1 Tax=Bicosoecida sp. CB-20... [more]
A0A1E7FWS6_9STRA4.530e-4550.57Uncharacterized protein n=1 Tax=Fragilariopsis cyl... [more]
B8BQF5_THAPS9.820e-4448.89Cyclin N-terminal domain-containing protein n=1 Ta... [more]
A0A7S2A727_9STRA1.170e-4350.57Hypothetical protein n=3 Tax=Ditylum brightwellii ... [more]
A0A7S4J8M4_9STRA1.660e-4350.85Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
A0A4D9CTG4_9STRA2.100e-4347.54CYCLIN domain-containing protein n=1 Tax=Nannochlo... [more]
A0A3R7FYU9_9STRA3.720e-4349.10Uncharacterized protein n=3 Tax=Phytophthora kerno... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.472.10coord: 48..183
e-value: 9.6E-8
score: 33.9
NoneNo IPR availablePANTHERPTHR14248FAMILY NOT NAMEDcoord: 14..178
NoneNo IPR availablePANTHERPTHR14248:SF37coord: 14..178
IPR006671Cyclin, N-terminalPFAMPF00134Cyclin_Ncoord: 52..148
e-value: 3.8E-9
score: 36.4
IPR036915Cyclin-like superfamilySUPERFAMILY47954Cyclin-likecoord: 37..149

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig13257contigH-elongata_contig13257:6175..8277 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig13257.2327.1mRNA_H-elongata_contig13257.2327.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig13257 6163..8335 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig13257.2327.1 ID=prot_H-elongata_contig13257.2327.1|Name=mRNA_H-elongata_contig13257.2327.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=230bp
MAPEVTQFSADQADVFDDKYFAFRYTFMQPPIMAIPGQLCVVKDTPVPAT
VEEVYEFIKGLFVKTYLSSECSVICLIYIERLMQMARVPLLESTWRPIIF
CALLLASKMWQDLGSWNGEFSAAYPDYKIKSIDKLEMRFLEALEWDLNVS
SSLYAKYYFALRSKSGVIPFRRRYQAILLQVERDALLCDGVAKDKLLPSR
IFPSTHSENDHPWSSRAQDGNAAMLSRSL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006671Cyclin_N
IPR036915Cyclin-like_sf