prot_H-elongata_contig132317.2319.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig132317.2319.1
Unique Nameprot_H-elongata_contig132317.2319.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length134
Homology
BLAST of mRNA_H-elongata_contig132317.2319.1 vs. uniprot
Match: A0A6H5JVN7_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVN7_9PHAE)

HSP 1 Score: 105 bits (263), Expect = 6.780e-24
Identity = 56/126 (44.44%), Postives = 80/126 (63.49%), Query Frame = 0
Query:    1 ELTFGTFNIRIVAVNGVNGIGH-IDSLLRPCASRGCDVTGLQETKWDGNSEITASGYRVYFSGDCTGVKGKKGQHGVGLAIKEETVNNVGKNDIAIECISARLLKARISIKYNF-LTFVVAYDPTE 124
            +L+FGTF++R +  +G N IGH +  +++  ++ GCDV GLQET+ +G   I   GY + +SG   G K K+G+ GVG+AIKE     VG+    +ECIS RL+K R+ I     +TFVV Y PTE
Sbjct:  154 DLSFGTFSVRTLVYSGRNPIGHNVMKVMQISSATGCDVIGLQETRREGQGSIAHDGYVIIWSGARAGTKDKRGEQGVGIAIKEAMWETVGEEGRKVECISPRLMKVRLQIGRTCGVTFVVGYAPTE 279          
BLAST of mRNA_H-elongata_contig132317.2319.1 vs. uniprot
Match: A0A6H5KSV0_9PHAE (Endo/exonuclease/phosphatase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSV0_9PHAE)

HSP 1 Score: 92.8 bits (229), Expect = 2.030e-19
Identity = 47/101 (46.53%), Postives = 66/101 (65.35%), Query Frame = 0
Query:   25 SLLRPCASRGCDVTGLQETKWDGNSEITASGYRVYFSGDCTGVKGKKGQHGVGLAIKEETVNNVGKNDIAIECISARLLKARISIKYNF-LTFVVAYDPTE 124
            ++++ C++ GCDVTGLQET+ +G   I   GY + +SG   G K K+G HGVG+AIKE    +VG+    +ECIS RL+K R+ I     +TFV+ Y PTE
Sbjct:    2 TVMQICSATGCDVTGLQETRREGQGSIAHDGYVIIWSGARAGTKDKRGVHGVGIAIKEAMWESVGEEGRTVECISPRLMKVRLQIGRTCGVTFVMGYAPTE 102          
BLAST of mRNA_H-elongata_contig132317.2319.1 vs. uniprot
Match: A0A6H5JR34_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JR34_9PHAE)

HSP 1 Score: 88.2 bits (217), Expect = 8.160e-18
Identity = 43/91 (47.25%), Postives = 62/91 (68.13%), Query Frame = 0
Query:    1 ELTFGTFNIRIVAVNGVNGIGH-IDSLLRPCASRGCDVTGLQETKWDGNSEITASGYRVYFSGDCTGVKGKKGQHGVGLAIKEETVNNVGK 90
            +L+FGTFN+R +A NG N IGH + ++++ C++  CDV GLQET+ +G   I   GY + +SG   G K K+G HGVG+AIKE    +VG+
Sbjct:   58 DLSFGTFNVRTLAYNGRNPIGHNVMTVMQICSATDCDVIGLQETRREGQGSIAHDGYVIIWSGARAGTKDKRGVHGVGIAIKEAMWESVGE 148          
BLAST of mRNA_H-elongata_contig132317.2319.1 vs. uniprot
Match: A0A6H5JUT2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUT2_9PHAE)

HSP 1 Score: 85.9 bits (211), Expect = 4.120e-17
Identity = 46/95 (48.42%), Postives = 60/95 (63.16%), Query Frame = 0
Query:   31 ASRGCDVTGLQETKWDGNSEITASGYRVYFSGDCTGVKGKKGQHGVGLAIKEETVNNVGKNDIAIECISARLLKARISIKYNF-LTFVVAYDPTE 124
            ++ GCDV  LQET+ +G   I   GY + +SG   G K K+G HGVG+AIKE    +VG+    +ECIS RL+KAR+ I     +TFVV Y PTE
Sbjct:    8 SATGCDVIELQETRREGQGSIAHDGYVIIWSGARAGTKDKRGVHGVGIAIKEAMWESVGEEGRTVECISPRLMKARLQIGRTCRVTFVVGYAPTE 102          
BLAST of mRNA_H-elongata_contig132317.2319.1 vs. uniprot
Match: A0A6H5JBD7_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBD7_9PHAE)

HSP 1 Score: 75.1 bits (183), Expect = 4.020e-13
Identity = 49/132 (37.12%), Postives = 69/132 (52.27%), Query Frame = 0
Query:    2 LTFGTFNIRIVAVNGVNGIGHIDSLLRPCASRGCDVTGLQETKWDGNSEITASGYRVYFSGDCTGVKGKKGQHGVGLAIKEETVNNVGKNDIAIECISARLLKARISIKYN--FLTFVVAYDPTEEATEGEK 131
            L   T+N+R +AV GVNG G   S+L   A +   V G+QET+  G +E  A+G+RV+  G  TG     G HGVG+A+KE        +    E I  RL+  R+ +  +   + FV A  PTE +T   K
Sbjct:   58 LRVATWNVRTLAVIGVNGYGRAYSVLHEAARQDVSVVGMQETRRAGRTEFAAAGFRVFCCGTETG-----GVHGVGIAVKESLCKT---STFTTEFIDERLMAMRLLLAGHRGAVNFVAASAPTEPSTASSK 181          
BLAST of mRNA_H-elongata_contig132317.2319.1 vs. uniprot
Match: A0A2P8XIN1_BLAGE (Craniofacial development protein 2 n=1 Tax=Blattella germanica TaxID=6973 RepID=A0A2P8XIN1_BLAGE)

HSP 1 Score: 58.2 bits (139), Expect = 5.090e-8
Identity = 38/133 (28.57%), Postives = 62/133 (46.62%), Query Frame = 0
Query:    2 LTFGTFNIRIVAVNGVNGIGHIDSLLRPCASRGCDVTGLQETKWDGNSEITASGYRVYFSGDCTGVKGKKGQHGVGLAIKEETVNNVGKNDIAIECISARLLKARISIKYNFLTFVVAYDPTEEATEGEKAKY 134
            +  GT+N++ +   G      +  L     +   D+  +QET+W     I    +  Y+ G  T    + GQ G G  IK++ V +V    IA   I+ R+ K RI  K+N +T +  Y PTEE  +  K ++
Sbjct:    1 MIIGTWNVKTLLKPG-----KLQELKEQIKNTTIDIVAVQETRWTDVGMIKKKDFTFYYGGPKT----RTGQAGTGFLIKQKMVKHV----IAFNTINERISKLRIRGKFNNITLINVYAPTEECQDNIKDQF 120          
BLAST of mRNA_H-elongata_contig132317.2319.1 vs. uniprot
Match: A0A2P8YNN3_BLAGE (Reverse transcriptase domain-containing protein n=2 Tax=Blattella germanica TaxID=6973 RepID=A0A2P8YNN3_BLAGE)

HSP 1 Score: 57.0 bits (136), Expect = 8.280e-7
Identity = 38/133 (28.57%), Postives = 59/133 (44.36%), Query Frame = 0
Query:    2 LTFGTFNIRIVAVNGVNGIGHIDSLLRPCASRGCDVTGLQETKWDGNSEITASGYRVYFSGDCTGVKGKKGQHGVGLAIKEETVNNVGKNDIAIECISARLLKARISIKYNFLTFVVAYDPTEEATEGEKAKY 134
            +  GT+N++ +   G      +  L         DV  +QET+W     I    +  Y+ G  T    + GQ G G  I+ + +N V    I  E  + R+ K RI  KYN +T +  Y PTEE  +  K ++
Sbjct:    1 MNIGTWNVKTLLKPG-----KLQELKEQLDKTTLDVVAVQETRWSNTEIIKKKDFTFYYGGPKT----RTGQAGTGFFIRTKVMNYV----IGFETYNERISKLRIKGKYNNVTLINVYAPTEEYQDNIKEQF 120          
BLAST of mRNA_H-elongata_contig132317.2319.1 vs. uniprot
Match: A0A2P8YU54_BLAGE (Craniofacial development protein 2 (Fragment) n=1 Tax=Blattella germanica TaxID=6973 RepID=A0A2P8YU54_BLAGE)

HSP 1 Score: 54.7 bits (130), Expect = 2.080e-6
Identity = 30/99 (30.30%), Postives = 52/99 (52.53%), Query Frame = 0
Query:   36 DVTGLQETKWDGNSEITASGYRVYFSGDCTGVKGKKGQHGVGLAIKEETVNNVGKNDIAIECISARLLKARISIKYNFLTFVVAYDPTEEATEGEKAKY 134
            ++  +QE +W G   I+   Y +++SG+    K K GQ G G  + ++  +++         I+ RL K R   KYN +T + +Y PTEE  + +K K+
Sbjct:   13 EILTIQEIRWSGEGTISKDKYTLFYSGN----KDKAGQAGTGFLVNKKLKDHIS----GFIPINERLCKLRYRGKYNNVTLINSYAPTEEKNDDDKEKF 103          
BLAST of mRNA_H-elongata_contig132317.2319.1 vs. uniprot
Match: A0A2P8ZA67_BLAGE (Reverse transcriptase domain-containing protein n=1 Tax=Blattella germanica TaxID=6973 RepID=A0A2P8ZA67_BLAGE)

HSP 1 Score: 53.5 bits (127), Expect = 1.340e-5
Identity = 31/92 (33.70%), Postives = 48/92 (52.17%), Query Frame = 0
Query:   36 DVTGLQETKWDGNSEITASGYRVYFSGDCTGVKGKKGQHGVGLAIKEETVNNVGKNDIAIECISARLLKARISIKYNFLTFVVAYDPTEEAT 127
            ++  LQE +W+G+  I    Y +Y+SG       K G+ G G  +K++  N++    I     + RL K RI  KYN +T +  Y PTE+ T
Sbjct:   22 EIVALQEIRWNGDGIINKKDYTLYYSGPSK----KTGKAGTGFFVKKKIHNSI----IDFVPHNDRLCKLRIQSKYNKITLINTYAPTEDKT 105          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig132317.2319.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 9
Match NameE-valueIdentityDescription
A0A6H5JVN7_9PHAE6.780e-2444.44Reverse transcriptase domain-containing protein n=... [more]
A0A6H5KSV0_9PHAE2.030e-1946.53Endo/exonuclease/phosphatase domain-containing pro... [more]
A0A6H5JR34_9PHAE8.160e-1847.25Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JUT2_9PHAE4.120e-1748.42Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JBD7_9PHAE4.020e-1337.12Reverse transcriptase domain-containing protein n=... [more]
A0A2P8XIN1_BLAGE5.090e-828.57Craniofacial development protein 2 n=1 Tax=Blattel... [more]
A0A2P8YNN3_BLAGE8.280e-728.57Reverse transcriptase domain-containing protein n=... [more]
A0A2P8YU54_BLAGE2.080e-630.30Craniofacial development protein 2 (Fragment) n=1 ... [more]
A0A2P8ZA67_BLAGE1.340e-533.70Reverse transcriptase domain-containing protein n=... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036691Endonuclease/exonuclease/phosphatase superfamilyGENE3D3.60.10.10coord: 1..133
e-value: 6.7E-10
score: 41.2
IPR036691Endonuclease/exonuclease/phosphatase superfamilySUPERFAMILY56219DNase I-likecoord: 2..127

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig132317contigH-elongata_contig132317:96..497 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig132317.2319.1mRNA_H-elongata_contig132317.2319.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig132317 96..497 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig132317.2319.1 ID=prot_H-elongata_contig132317.2319.1|Name=mRNA_H-elongata_contig132317.2319.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=134bp
ELTFGTFNIRIVAVNGVNGIGHIDSLLRPCASRGCDVTGLQETKWDGNSE
ITASGYRVYFSGDCTGVKGKKGQHGVGLAIKEETVNNVGKNDIAIECISA
RLLKARISIKYNFLTFVVAYDPTEEATEGEKAKY
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036691Endo/exonu/phosph_ase_sf