prot_H-elongata_contig13065.2221.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig13065.2221.1
Unique Nameprot_H-elongata_contig13065.2221.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length284
Homology
BLAST of mRNA_H-elongata_contig13065.2221.1 vs. uniprot
Match: A0A6H5JVS6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVS6_9PHAE)

HSP 1 Score: 225 bits (573), Expect = 1.440e-67
Identity = 126/295 (42.71%), Postives = 174/295 (58.98%), Query Frame = 0
Query:    1 SDGGTHFTGKVMQMVSSRLGVVHHFGVANVSCSHGTVERMNREVVKTFGAVLSERRRPPSEWPLLLGA-----------RMGTKPFQMMTGRPPATAMSVLAGGDGDGWTVEELDVSGEQMQAWVAGWVREQEDLRCDVVKRVREQRERVRELRGRGHLPVFEVGDYVLVARVRKPGRVSKLAQTWTGPWRVVPGGSEHVRVVENIVTGETQEVHVVRMRPYADSSLVVGAEVRKVFEMTKHQGEFEMADVISVGKDPARVVK-YRVQIAWVGLENEEPTWEPMSTIYADAPKYI 283
            SD  THF   VM  +   LGV   F VAN   S+GT ERM REVV+T  AVL ERRR   +W  L+ A           R  + P+ +M GR P T+ S LA   G+ W ++ LD +  +++  V   ++ Q  L   + ++V   R R R    RG LP F VGDYV+VARVR+ G   KL+ TWTGPWRVV    +HV  V+NIV G+ ++VHV R+R YADS L V ++++ VF+ +  QGE EM  ++++G  PA     Y V++ W G E +E TW+P+S IY DAP+++
Sbjct:  111 SDTATHFKNSVMDTLEKALGVERRFTVANSPWSNGTCERMMREVVRTMKAVLQERRRNLRDWVDLVPAVQWALNTAYRERYASTPYHVMFGRAPRTSFSTLASSSGEAWNIDTLDAT--KLKQQVQNVIQTQAVLHKQIQQKVDHNRARQRAAASRGDLPAFTVGDYVMVARVRRSGITPKLSSTWTGPWRVVSAAKKHVYGVQNIVNGQVRDVHVARLRFYADSELNVTSDLKDVFQHSFGQGEHEMESILNIG--PAHDGSGYLVRVRWAGFEEDEDTWQPLSDIYQDAPQFL 401          
BLAST of mRNA_H-elongata_contig13065.2221.1 vs. uniprot
Match: A0A6H5L7F6_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7F6_9PHAE)

HSP 1 Score: 225 bits (574), Expect = 2.660e-63
Identity = 126/295 (42.71%), Postives = 174/295 (58.98%), Query Frame = 0
Query:    1 SDGGTHFTGKVMQMVSSRLGVVHHFGVANVSCSHGTVERMNREVVKTFGAVLSERRRPPSEWPLLLGA-----------RMGTKPFQMMTGRPPATAMSVLAGGDGDGWTVEELDVSGEQMQAWVAGWVREQEDLRCDVVKRVREQRERVRELRGRGHLPVFEVGDYVLVARVRKPGRVSKLAQTWTGPWRVVPGGSEHVRVVENIVTGETQEVHVVRMRPYADSSLVVGAEVRKVFEMTKHQGEFEMADVISVGKDPARVVK-YRVQIAWVGLENEEPTWEPMSTIYADAPKYI 283
            SD  THF   VM  +   LGV   F VAN   S+GT ERM RE+V+T  AVL ERRR   +W  L+ A           R  + P+ +M GR P T+ S LA   G+ W ++ LD +  +++  V   ++ Q  L   V ++V   R R R    RG LP F VGDYV+VARVR+ G   KL+ TWTGPWRVV    +HV  V+NIV G+ ++VHV R+R YADS L V ++++ VF+ +  QGE EM  ++++G  PA     Y V++ W G E +E TW+P+S IY DAP+++
Sbjct: 1334 SDTATHFKNSVMDTLEKALGVERRFTVANSPWSNGTCERMMREIVRTMKAVLQERRRNVRDWVDLVPAVQWALNTAYRERYASTPYHVMFGRAPRTSFSTLASSSGEAWNIDTLDAT--KLKQQVQNVIQTQAVLHKQVQQKVDHNRARQRAAASRGDLPAFTVGDYVMVARVRRSGITPKLSSTWTGPWRVVSAAKKHVYGVQNIVNGQVRDVHVARLRFYADSELNVTSDLKDVFQHSFGQGEHEMESILNIG--PAHDGSGYLVRVRWAGFEEDEDTWQPLSDIYQDAPQFL 1624          
BLAST of mRNA_H-elongata_contig13065.2221.1 vs. uniprot
Match: A0A6H5K5A5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5A5_9PHAE)

HSP 1 Score: 163 bits (413), Expect = 9.030e-42
Identity = 109/296 (36.82%), Postives = 159/296 (53.72%), Query Frame = 0
Query:    1 SDGGTHFTGKVMQMVSSRLGVVHHFGVANVSCSHGTVERMNREVVKTFGAVLSERRRPPSEWPLLLGA-----------RMGTKPFQMMTGRPPATAMSVLAGGDGDGWTVEELDVSGEQMQAWVAGWVREQEDLRCDVVKRVREQRERVRELRGRGHLPVFEVGDYVLVARVRKPGRVSKLAQTWTGPWRVVPGGSEHVRVVENIVTGETQEVHVVRMRPYADSSLVVGAEVRKVFEMTKHQGEFEMADVI--SVGKDPARVVKYRVQIAWVGLENEEPTWEPMSTIYADAPKYI 283
            SD  +HF   +M  + + LGV  +F VAN   S+GT ERM REVV+T  A++ E R    +W  L+ A           R G+ P+ +M GR P TA+S LA   G  W V+ LD    +++  V   V  Q  L  +V+ +V+  R + R     G LP F VGDYV+VA  R                        HV  V+NIV+GE ++VHV R+R YAD++L + AE+++VF+    QGEFEMA ++  SV +D      + V++ WVG + EE TWE +S ++  AP+++
Sbjct: 1436 SDTASHFKNHMMAALETALGVDRNFSVANSPWSNGTCERMMREVVRTLKAMIQEERGRTRDWVDLVPAVQWALNTAFRERYGSTPYHVMFGRAPRTALSTLASSTGAEWKVDVLDEKSLRLK--VQHVVEAQRHLHKEVLDKVQASRSKHRASARVGSLPDFVVGDYVIVAAERL-----------------------HVYGVQNIVSGEVRDVHVARLRFYADAALEITAELKEVFQHAFTQGEFEMAAIVDMSVAEDGPG---FDVEVEWVGFDKEENTWEELSKMWDAAPQFV 1703          
BLAST of mRNA_H-elongata_contig13065.2221.1 vs. uniprot
Match: A0A6H5KAI3_9PHAE (Chromo domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAI3_9PHAE)

HSP 1 Score: 146 bits (369), Expect = 3.790e-40
Identity = 70/140 (50.00%), Postives = 97/140 (69.29%), Query Frame = 0
Query:  145 RGHLPVFEVGDYVLVARVRKPGRVSKLAQTWTGPWRVVPGGSEHVRVVENIVTGETQEVHVVRMRPYADSSLVVGAEVRKVFEMTKHQGEFEMADVISVGKDPARVVK-YRVQIAWVGLENEEPTWEPMSTIYADAPKYI 283
            RG LP F VGDYV+VARVR+ G   KL+ TWTGPWRVV    +HV  V+NIV G+ ++VHV R+R YADS L V ++++ VF+ +  QGE EM  ++++G  PA     Y V++ W G E +E TW+P+S IY DAP+++
Sbjct:    9 RGDLPAFTVGDYVMVARVRRSGITPKLSSTWTGPWRVVSAAKKHVYGVQNIVNGQVRDVHVARLRFYADSELNVTSDLKDVFQHSFGQGEHEMESILNIG--PAHDGSGYLVRVRWAGFEEDEDTWQPLSDIYQDAPQFL 146          
BLAST of mRNA_H-elongata_contig13065.2221.1 vs. uniprot
Match: A0A6G0RPX5_9STRA (Uncharacterized protein n=4 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6G0RPX5_9STRA)

HSP 1 Score: 123 bits (308), Expect = 4.890e-29
Identity = 92/296 (31.08%), Postives = 154/296 (52.03%), Query Frame = 0
Query:    1 SDGGTHFTGKVMQMVSSRLGVVHHFGVANVSCSHGTVERMNREVVKTFGAVLSERRRPPSEWPLLLG-----------ARMGTK-PFQMMTGRPPATAMSVLAGGDGDGWTVEELDVSGEQMQAWVAGWVREQEDLRCDVVKRVREQRERVREL-RGRGHLPVFEVGDYVLVARVRKPGRVSKLAQTWTGPWRVVPGGSEHVRVVENIVTGETQEVHVVRMRPYADSSLVVGAEVRKVFEMTKHQGEFEMADVISVGKDPARVVKYRVQIAWVGLENEEPTWEPMSTIYADAPKYI 283
            SD G+HF  +VM  +  RL     F  A     +GTVER+NR++++   A+L E +     W  LL            A +G   P ++  G P  +A+  +A     G  +  +D   E++ A V    R    +R +     +++++R+ E+ R +G +  F VGD+VL +RV    + SKL   W GP+RVV    +H  ++E+++T +  EVH  R++ Y DSSL V AE+++   + K      +  +++   +P    ++ VQ+AW+GLE+ E +WEP+  IYAD P  +
Sbjct:   66 SDNGSHFKAEVMASLCERLKANQSFVPAYTPWINGTVERINRDILQVLRAMLLEFQLDTGNWLYLLPLIQANLNHSPVASLGNHAPIEVFMGLPAPSALDTIAVPSDKGTRLVPVDP--ERVSAHVEKLRRSLHAMRKEAT--TQKEKKRLYEMARAKGGICNFAVGDFVLWSRVDSRLQGSKLLVRWVGPFRVVEA-RQHSFIIEHLITKDKVEVHGSRLKFYCDSSLNVTAELKE--HVAKQGIVLGVRAIVNHRNNPVSN-EWEVQVAWIGLEDVENSWEPLRRIYADVPTKV 353          
BLAST of mRNA_H-elongata_contig13065.2221.1 vs. uniprot
Match: A0A6A3HSR4_9STRA (Uncharacterized protein n=2 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A3HSR4_9STRA)

HSP 1 Score: 119 bits (298), Expect = 1.780e-27
Identity = 98/300 (32.67%), Postives = 146/300 (48.67%), Query Frame = 0
Query:    1 SDGGTHFTGKVMQMVSSRLGVVHHFGVANVSCSHGTVERMNREVVKTFGAVLSERRRPPSEWPLLLG---ARMGTKPFQMMTGRPPATAMSVLAGGDG--------------DGWTVEELDVSGEQMQAWVAGWVREQEDLRCDVVKRVREQRERVRELRGRGHLPVFEVGDYVLVARVRKPGRV-SKLAQTWTGPWRVVPGGSEHVRVVENIVTGETQEV-HVVRMRPYADSSLVVGAEVRKVFEMTKH-QGEFEMADVISVGKDPARVVKYRVQIAWVGLENEEPTWEPMSTIYADAP 280
            SD G HF  +VM+ +S  LG  HHF  A    ++GTVE +NREV+K+  A+LSERR    +WP +L    A + T P   + G  P TA + L GG                  W  +E       ++A + G  RE  +      KR R  R+R  + RG   LP F  GD+VL A     GR  +KLA  W GP R+V   +++   V++++     E+ H  R++ Y D++        ++ E   H QG   + D+ +    P    ++ VQ+ W GL++ E +WEP  TI +D P
Sbjct:   54 SDQGAHFKNQVMEKLSVALGANHHFTTAYTPWANGTVEVVNREVLKSVKALLSERRLQVQDWPRVLPVVQAALNTMPADRLGGVTPLTAFTALLGGSQLRGILHPRDPLVSTVTWVEDETIQHLASVRAALDGMHREMTNAS---EKRRRAARDRHAKKRGCVTLPRFSEGDFVLAATAT--GRSGNKLALLWRGPKRIVKAVNDYTFEVQDLMAPFDIELRHASRLQLYRDAAR---GHAEELVEQAIHGQGGHLIEDLKACRLSP-ETHRWEVQVKWFGLDDIEQSWEPAETIRSDVP 344          
BLAST of mRNA_H-elongata_contig13065.2221.1 vs. uniprot
Match: A0A225VKM9_9STRA (RNA-directed DNA polymerase n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225VKM9_9STRA)

HSP 1 Score: 122 bits (305), Expect = 1.950e-27
Identity = 95/298 (31.88%), Postives = 148/298 (49.66%), Query Frame = 0
Query:    1 SDGGTHFTGKVMQMVSSRLGVVHHFGVANVSCSHGTVERMNREVVKTFGAVLSERRRPPSEWPLLLG---ARMGTKPFQMM---------TGRPPATAMSVLAGGDGDGWTVEELDVSGEQMQAWVAGWVREQEDLRCDVVKRVREQRERVR---ELRGRGHLPVFEVGDYVLVARVRKPGRVSKLAQTWTGPWRVVPGGSEHVRVVENIVTGETQEVHVVRMRPYADSSLVVGAEVRKVFEMTKHQGEFEMADVISVGKDPARVVKYRVQIAWVGLENEEPTWEPMSTIYADAPKYI 283
            S  G++F  +VM+ +S RL     F      C +GTVER+NR++++   A+L E +     W  LL    A +   P   +         TG P  +A+  +A     G  +  +D   E++ A V  ++        D+ K    QRE+ R     R +G +  F VGD+VL +RV    + SKL   W GP+RVV    +H  +V++++T +  EVH  R++ Y DSSL V AE++   E    QG      V+ V        ++ VQ+AW+GLE+ E +WEP+ +IY D P  +
Sbjct:  923 SANGSYFKAEVMEQLSKRLKANQSFVPVYTPCINGTVERINRDILQVLRAMLLEFQLDTRNWLYLLPLIQANLNHAPVASLGNXXXXXXFTGLPAPSALDTIAVPSDKGTRLVPVDP--ERVSAHVEKYLH-------DMHKEAATQREKKRLYEMARAKGRICNFVVGDFVLWSRVDSRLQGSKLLVRWVGPFRVVEA-RQHSFIVQHLITKDKVEVHGSRLKFYCDSSLNVTAELK---EHVAKQGI-----VLGVRASITGSTQWEVQVAWIGLEDVENSWEPLRSIYVDVPTKV 1202          
BLAST of mRNA_H-elongata_contig13065.2221.1 vs. uniprot
Match: A0A6A4G1U2_9STRA (Uncharacterized protein n=1 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A4G1U2_9STRA)

HSP 1 Score: 120 bits (301), Expect = 6.300e-27
Identity = 90/296 (30.41%), Postives = 153/296 (51.69%), Query Frame = 0
Query:    1 SDGGTHFTGKVMQMVSSRLGVVHHFGVANVSCSHGTVERMNREVVKTFGAVLSERRRPPSEWPLLLG-----------ARMGTK-PFQMMTGRPPATAMSVLAGGDGDGWTVEELDVSGEQMQAWVAGWVREQEDLRCDVVKRVREQRERVREL-RGRGHLPVFEVGDYVLVARVRKPGRVSKLAQTWTGPWRVVPGGSEHVRVVENIVTGETQEVHVVRMRPYADSSLVVGAEVRKVFEMTKHQGEFEMADVISVGKDPARVVKYRVQIAWVGLENEEPTWEPMSTIYADAPKYI 283
            SD G+HF  +VM  +  RL     F        +GTVER+NR++++   A+L E +     W  LL            A +G   P ++ TG P  +A+  +A     G  +  +D   E++ A V    R    +  +     +++++R+ E+ R +G +  F VGD+VL +RV    + SKL   W GP+RVV    +H  ++++++T +  EVH  R++ Y DSSL V AE+++   + K      +  +++   +P    ++ VQ+AW+GLE+ E +WEP+  IYAD P  +
Sbjct:  689 SDNGSHFKAEVMASLCERLKANQSFVPVYTPWINGTVERINRDILQVLRAMLLEFQLDTRNWLYLLPLIQANLNHSPVASLGNHAPIEVFTGLPAPSALDTIAVPSDKGTRLVPVDP--ERVSAHVEKLRRSLHAMHKEAT--TQKEKKRLYEMARAKGGICNFAVGDFVLWSRVDSRLQGSKLLVRWVGPFRVVEA-RQHSFIIDHLITKDKVEVHGSRLKFYCDSSLNVTAELKE--HVAKQGIVLGVRAIVNHRNNPVSN-EWEVQVAWIGLEDVENSWEPLRRIYADVPTKV 976          
BLAST of mRNA_H-elongata_contig13065.2221.1 vs. uniprot
Match: A0A6A3KPV3_9STRA (Uncharacterized protein n=3 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A3KPV3_9STRA)

HSP 1 Score: 120 bits (301), Expect = 6.800e-27
Identity = 90/296 (30.41%), Postives = 153/296 (51.69%), Query Frame = 0
Query:    1 SDGGTHFTGKVMQMVSSRLGVVHHFGVANVSCSHGTVERMNREVVKTFGAVLSERRRPPSEWPLLLG-----------ARMGTK-PFQMMTGRPPATAMSVLAGGDGDGWTVEELDVSGEQMQAWVAGWVREQEDLRCDVVKRVREQRERVREL-RGRGHLPVFEVGDYVLVARVRKPGRVSKLAQTWTGPWRVVPGGSEHVRVVENIVTGETQEVHVVRMRPYADSSLVVGAEVRKVFEMTKHQGEFEMADVISVGKDPARVVKYRVQIAWVGLENEEPTWEPMSTIYADAPKYI 283
            SD G+HF  +VM  +  RL     F        +GTVER+NR++++   A+L E +     W  LL            A +G   P ++ TG P  +A+  +A     G  +  +D   E++ A V    R    +  +     +++++R+ E+ R +G +  F VGD+VL +RV    + SKL   W GP+RVV    +H  ++++++T +  EVH  R++ Y DSSL V AE+++   + K      +  +++   +P    ++ VQ+AW+GLE+ E +WEP+  IYAD P  +
Sbjct: 1105 SDNGSHFKAEVMASLCERLKANQSFVPVYTPWINGTVERINRDILQVLRAMLLEFQLDTRNWLYLLPLIQANLNHSPVASLGNHAPIEVFTGLPAPSALDTIAVPSDKGTRLVPVDP--ERVSAHVEKLRRSLHAMHKEAT--TQKEKKRLYEMARAKGGICNFAVGDFVLWSRVDSRLQGSKLLVRWVGPFRVVEA-RQHSFIIDHLITKDKVEVHGSRLKFYCDSSLNVTAELKE--HVAKQGIVLGVRAIVNHRNNPVSN-EWEVQVAWIGLEDVENSWEPLRRIYADVPTKV 1392          
BLAST of mRNA_H-elongata_contig13065.2221.1 vs. uniprot
Match: A0A2P4XSG7_9STRA (Uncharacterized protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XSG7_9STRA)

HSP 1 Score: 119 bits (297), Expect = 7.010e-27
Identity = 86/283 (30.39%), Postives = 137/283 (48.41%), Query Frame = 0
Query:    1 SDGGTHFTGKVMQMVSSRLGVVHHFGVANVSCSHGTVERMNREVVKTFGAVLSERRRPPSEWPLLLGAR---MGTKPFQMMTGRPPATAMSVLAGGDGDGWTVEELDVSGEQMQAWVAGWVREQEDLRCDVVKRVREQRERVRELRGRGHLPVFEVGDYVLVARVRKPGRVSKLAQTWTGPWRVVPGGSEHVRVVENIVTGETQEVHVVRMRPYADSSLVVGAEVRKVFEMTKHQGEFEMADVISVGKDPARVVKYRVQIAWVGLENEEPTWEPMSTIYADAP 280
            SD GTHF  KV++ +   LG  HHF  A    ++GTVE +NREV++   A+LSE R    EWP ++      +   P   + G  P TAM+ L   +      + L V                + ++   +  +  QR +    +    +  F+VGD+VL A V +  R +KL   W GP +V    S  +  +EN++TGE +EVH  R++ YADSSL V  ++ +      H  E  + D +   +  A+  ++ +++ W GL   E +WEP + +  D P
Sbjct:  191 SDQGTHFKNKVIEGLQHALGAHHHFTTARCPWANGTVEVVNREVLRCCRALLSEWRLQSGEWPRVIKIVQMVLNHSPCSAIDGVAPVTAMTGLKAMN----PTDPLAVP---------------DPIQVATLDEI--QRRKHHNGKKGTTMAQFDVGDFVLYADVWQHAR-AKLRVKWCGPAQVTAATSNWIFEIENLITGERREVHASRLKFYADSSLEVTEDLLR---HVAHNSEGHVVDSLLAARYNAQEKRHELKVHWRGLAEAEDSWEPAAVLLQDVP 448          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig13065.2221.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JVS6_9PHAE1.440e-6742.71Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L7F6_9PHAE2.660e-6342.71Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K5A5_9PHAE9.030e-4236.82Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KAI3_9PHAE3.790e-4050.00Chromo domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A6G0RPX5_9STRA4.890e-2931.08Uncharacterized protein n=4 Tax=Phytophthora fraga... [more]
A0A6A3HSR4_9STRA1.780e-2732.67Uncharacterized protein n=2 Tax=Phytophthora fraga... [more]
A0A225VKM9_9STRA1.950e-2731.88RNA-directed DNA polymerase n=1 Tax=Phytophthora m... [more]
A0A6A4G1U2_9STRA6.300e-2730.41Uncharacterized protein n=1 Tax=Phytophthora rubi ... [more]
A0A6A3KPV3_9STRA6.800e-2730.41Uncharacterized protein n=3 Tax=Phytophthora rubi ... [more]
A0A2P4XSG7_9STRA7.010e-2730.39Uncharacterized protein n=1 Tax=Phytophthora palmi... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 1..96
e-value: 2.9E-10
score: 41.6
IPR000953Chromo/chromo shadow domainPROSITEPS50013CHROMO_2coord: 235..283
score: 9.426
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 1..84

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig13065contigH-elongata_contig13065:7536..8420 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig13065.2221.1mRNA_H-elongata_contig13065.2221.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig13065 7536..8420 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig13065.2221.1 ID=prot_H-elongata_contig13065.2221.1|Name=mRNA_H-elongata_contig13065.2221.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=284bp
SDGGTHFTGKVMQMVSSRLGVVHHFGVANVSCSHGTVERMNREVVKTFGA
VLSERRRPPSEWPLLLGARMGTKPFQMMTGRPPATAMSVLAGGDGDGWTV
EELDVSGEQMQAWVAGWVREQEDLRCDVVKRVREQRERVRELRGRGHLPV
FEVGDYVLVARVRKPGRVSKLAQTWTGPWRVVPGGSEHVRVVENIVTGET
QEVHVVRMRPYADSSLVVGAEVRKVFEMTKHQGEFEMADVISVGKDPARV
VKYRVQIAWVGLENEEPTWEPMSTIYADAPKYI*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036397RNaseH_sf
IPR000953Chromo/chromo_shadow_dom
IPR012337RNaseH-like_sf