prot_H-elongata_contig12884.2123.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig12884.2123.1
Unique Nameprot_H-elongata_contig12884.2123.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length161
Homology
BLAST of mRNA_H-elongata_contig12884.2123.1 vs. uniprot
Match: D7FJY6_ECTSI (Hydrocephalus-inducing protein, Hydin-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJY6_ECTSI)

HSP 1 Score: 254 bits (650), Expect = 1.680e-75
Identity = 132/171 (77.19%), Postives = 146/171 (85.38%), Query Frame = 0
Query:    1 VLRLRNNDSVNRRLKLLPMDSLNFTVSGPRSPHKLRALKQTK-----------VAPGMEVCYVVTFKPQEVRAYSAELFVVTEREKFVVPVEAVGHRAVLDFPDKVVMPHTAVKAAGTKNILVRNLGTRAASVSLSCQPAGTFSIEPPQVVVPMGESAQLELGFNPKQSVR 160
            VL  RNNDSVNRRLKLLP+DS +F+VSGPRSPHKL+ALKQTK           VAPGMEVCYVVTFKPQEVRAYS EL VVTEREKFVVPV A+GHRAVLDFPD++ MPHTAVKA GTKNI+VRNLGTR AS SLSC+PAGTFSI P QVVVP+G S+QLEL FNP++S+R
Sbjct:  145 VLCFRNNDSVNRRLKLLPLDSPHFSVSGPRSPHKLKALKQTKRLTETLYVRMKVAPGMEVCYVVTFKPQEVRAYSVELMVVTEREKFVVPVGALGHRAVLDFPDQIAMPHTAVKATGTKNIVVRNLGTRTASASLSCEPAGTFSINPAQVVVPVGTSSQLELAFNPERSIR 315          
BLAST of mRNA_H-elongata_contig12884.2123.1 vs. uniprot
Match: A0A6H5K5Z3_9PHAE (MSP domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5Z3_9PHAE)

HSP 1 Score: 158 bits (400), Expect = 7.340e-42
Identity = 80/94 (85.11%), Postives = 86/94 (91.49%), Query Frame = 0
Query:    1 VLRLRNNDSVNRRLKLLPMDSLNFTVSGPRSPHKLRALKQTKVAPGMEVCYVVTFKPQEVRAYSAELFVVTEREKFVVPVEAVGHRAVLDFPDK 94
            VL  RNNDSVNRRLKLLP+DS +F+VSGPRSP KL+ALKQTKVAPGMEVCYVVTFKPQEVRAYS EL VVTEREKFVVPV A+GHRA LDFPD+
Sbjct:   89 VLCFRNNDSVNRRLKLLPLDSPHFSVSGPRSPQKLKALKQTKVAPGMEVCYVVTFKPQEVRAYSVELMVVTEREKFVVPVGALGHRAALDFPDQ 182          
BLAST of mRNA_H-elongata_contig12884.2123.1 vs. uniprot
Match: A0A835YJI6_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJI6_9STRA)

HSP 1 Score: 154 bits (389), Expect = 2.100e-40
Identity = 80/153 (52.29%), Postives = 105/153 (68.63%), Query Frame = 0
Query:    1 VLRLRNNDSVNRRLKLLPMDSLNFTVSGPRSPHKLRALKQTKVAPGMEVCYVVTFKPQEVRAYSAELFVVTEREKFVVPVEAVGHRAVLDFPDKVVMPHTAVKAAGTKNILVRNLGTRAASVSLSCQPAGTFSIEPPQVVVPMGESAQLELGF 153
            VL LRNNDSVNRR+K+L ++S  FTVSGPR P  L  L Q+K+APGMEVC+VVTF+PQE+  Y+AEL V TEREKF+VPV A G  A LD PD++      VKA  +K ++ RN+G   A+   +      FS+ P ++V+P GES  +E+ F
Sbjct:  127 VLYLRNNDSVNRRVKVLAVESPYFTVSGPRRPGTLTQLSQSKIAPGMEVCFVVTFRPQEIEPYAAELVVATEREKFIVPVRATGRSAALDLPDRIAFSAQPVKATRSKTLICRNVGACEAAAEAA------FSVYPSELVLPAGESTTVEVSF 273          
BLAST of mRNA_H-elongata_contig12884.2123.1 vs. uniprot
Match: F0Y448_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y448_AURAN)

HSP 1 Score: 136 bits (342), Expect = 4.660e-34
Identity = 75/156 (48.08%), Postives = 97/156 (62.18%), Query Frame = 0
Query:    2 LRLRNNDSVNRRLKLLPMDSLNFTVSGPRSPHKLRALKQTKVAPGMEVCYVVTFKPQEVRAYSAELFVVTEREKFVVPVEAVGHRAVLDFPDKVVMPHTAVKAAGTKNILVRNLGTRAASVSLSCQPAGTFSIEPPQVVVPMGESAQLELGFNPKQ 157
            LR RNND V RR+K+L   S  F VSGP +  K   LKQ+KVA GMEVC+VV F+PQEVR Y  +L   TEREKF+VPV A G RA L  P++V     AVK+   +++LV+N+G   A   LSC     F   P + +  +G+ A LEL F P++
Sbjct:   65 LRFRNNDHVARRIKVLQPKSPYFEVSGPHARGKDVTLKQSKVATGMEVCFVVKFRPQEVREYKVDLVCCTEREKFIVPVRAFGLRAALSLPEEVDFGTAAVKSTKQRSLLVQNIGACTAVFKLSCDTPEIFQASPSESITQVGQMATLELSFTPQK 220          
BLAST of mRNA_H-elongata_contig12884.2123.1 vs. uniprot
Match: UPI0014257BDE (hydrocephalus-inducing protein homolog isoform X1 n=2 Tax=Anneissia japonica TaxID=1529436 RepID=UPI0014257BDE)

HSP 1 Score: 120 bits (302), Expect = 1.120e-28
Identity = 71/152 (46.71%), Postives = 95/152 (62.50%), Query Frame = 0
Query:    4 LRNNDSVNRRLKLLPMDSLNFTVSGPRSPHKLRALKQTKVAPGMEVCYVVTFKPQEVRAYSAELFVVTEREKFVVPVEAVGHRAVLDFPDKVVMPHTAVKAAGTKNILVRNLGTRAASVSLSCQPAGTFSIEPPQVVVPMGESAQLELGFNP 155
            LRNND V R +K++  DS  F V    SPH +      KVAPG+   + V F P+E + Y  EL  +TEREKF+VPV+A+G RA+LDFPD V  P + VK   TK +LVRN+G R A  SL+ +    F + P + ++P+GES Q+EL F P
Sbjct:  120 LRNNDKVPRLVKVVQADSPYFKVI---SPHDV----SHKVAPGIPTIFKVQFIPEEKKDYMHELVCITEREKFIVPVKAIGARAILDFPDDVTFPTSPVKFPSTKMLLVRNIGNREAKFSLNTE--RPFFVNPEKGILPVGESMQIELTFKP 262          
BLAST of mRNA_H-elongata_contig12884.2123.1 vs. uniprot
Match: A0A813ZMT4_9BILA (Hypothetical protein n=1 Tax=Didymodactylos carnosus TaxID=1234261 RepID=A0A813ZMT4_9BILA)

HSP 1 Score: 117 bits (293), Expect = 1.400e-28
Identity = 65/155 (41.94%), Postives = 96/155 (61.94%), Query Frame = 0
Query:    2 LRLRNNDSVNRRLKLLPMDSLNFTV-SGPRSPHKLRALKQTKVAPGMEVCYVVTFKPQEVRAYSAELFVVTEREKFVVPVEAVGHRAVLDFPDKVVMPHTAVKAAGTKNILVRNLGTRAASVSLSCQPAGTFSIEPPQVVVPMGESAQLELGFNP 155
            L LRNND V R +K+  +D+  F + + P + HK        VAPG+ + Y + F P+E R Y+ E+ + TEREKF++P+ A+G RA+LDFPD+V  P TAVK+  +K + VRN+GTR A   L  Q    + + P   ++P+GES Q+ + F P
Sbjct:  114 LLLRNNDKVARAVKVTQVDTPYFKIIAPPNAAHK--------VAPGVAIVYKIQFIPEEQRDYTHEIIIATEREKFLIPIRAIGSRAILDFPDEVTFPTTAVKSTNSKVLFVRNVGTREARFVL--QANKPYYVSPENGILPVGESMQVTVDFKP 258          
BLAST of mRNA_H-elongata_contig12884.2123.1 vs. uniprot
Match: A0A7S0N684_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0N684_9CHLO)

HSP 1 Score: 115 bits (288), Expect = 2.520e-28
Identity = 65/156 (41.67%), Postives = 94/156 (60.26%), Query Frame = 0
Query:    1 VLRLRNNDSVNRRLKLLPMDSLNFTVSGPRSPHKLRALKQT-KVAPGMEVCYVVTFKPQEVRAYSAELFVVTEREKFVVPVEAVGHRAVLDFPDKVVMPHTAVKAAGTKNILVRNLGTRAASVSLSCQPAGTFSIEPPQVVVPMGESAQLELGFNP 155
            +L LRNND   RR+K+LP++S  F+++  +   K    +++ KVAPGMEV Y +TF P+       +L V TEREK++VP+ A+G R  LDFPD+++  HT VK   TK+ LV+N+G +A S  L   P   F+I P    + +GE  Q    F P
Sbjct:   95 LLCLRNNDKFGRRVKVLPLNSPYFSIAAAKKKGKSGHEEESGKVAPGMEVQYKITFSPKTTDDCGVDLIVATEREKYIVPIRAIGVRGALDFPDEIIFEHTIVKDTTTKSFLVQNVGQKATSFQLFASPP--FAITPTFGNLEIGEMLQCTASFTP 248          
BLAST of mRNA_H-elongata_contig12884.2123.1 vs. uniprot
Match: A0A507EKP6_9FUNG (MSP domain-containing protein n=2 Tax=Spizellomyces TaxID=4815 RepID=A0A507EKP6_9FUNG)

HSP 1 Score: 119 bits (298), Expect = 3.850e-28
Identity = 66/158 (41.77%), Postives = 96/158 (60.76%), Query Frame = 0
Query:    1 VLRLRNNDSVNRRLKLLPMDSLNFTVSGPRSPHKLRALKQTKVAPGMEVCYVVTFKPQEVRAYSAELFVVTEREKFVVPVEAVGHRAVLDFPDKVVMPHTAVKAAGTKNILVRNLGTRAASVSLSCQPAGTFSIEPPQVVVPMGESAQLELGFNPKQS 158
            V+  RNND V RRL+L P+DS  FT+ G ++ +    L   K+APGM+V Y++ F P+    Y   L  VTERE F+VP+EA+G RAVLDFPD++V     VK   T+ +LVRN+G   A   +   P   F + P    + + +S Q+++ F+P+QS
Sbjct:  139 VINFRNNDKVPRRLRLEPIDSPYFTIVGSKNDN----LNSGKIAPGMDVAYILRFTPEAETDYKYNLVCVTERETFLVPIEAIGARAVLDFPDELVFTDAPVKFDTTRTLLVRNIGNHPAKFHIKTGPP--FHVSPTNGYLDLKQSMQIDVVFHPEQS 290          
BLAST of mRNA_H-elongata_contig12884.2123.1 vs. uniprot
Match: A0A2K3E6E5_CHLRE (Uncharacterized protein n=4 Tax=Chlamydomonas TaxID=3052 RepID=A0A2K3E6E5_CHLRE)

HSP 1 Score: 118 bits (295), Expect = 9.750e-28
Identity = 74/159 (46.54%), Postives = 94/159 (59.12%), Query Frame = 0
Query:    2 LRLRNNDSVNRRLKLLPMDSLNFTVSGPRSPHKLRALKQTKVAPGMEVCYVVTFKPQEVRAYSAELFVVTEREKFVVPVEAVGHRAVLDFPDKVVMPHTAVKAAGTKNILVRNLGTRAASVSLSCQPAGTFSIEPPQVVVPMGESAQLELGFNPKQSVR 160
            L LRNND+V+RR+K+LPMDS  F+V     P      +  KVA GMEV + VTFKP+    YS +L V TEREKFVVPV AVG  A LDFPD V     A K    + + VRN+G++AA  SLS  P   F++ P    +  GE+ Q  + F P  + R
Sbjct:  109 LYLRNNDNVSRRVKVLPMDSPYFSVRRAAPP--AAGKEDNKVATGMEVAFTVTFKPESRDDYSCDLVVCTEREKFVVPVLAVGASAALDFPDLVDFGSVATKVETKQTLFVRNVGSKAAHFSLSAPPP--FTVTPTAGHLSPGETLQCSVVFEPPSTGR 263          
BLAST of mRNA_H-elongata_contig12884.2123.1 vs. uniprot
Match: A0A821QYT5_9BILA (Hypothetical protein (Fragment) n=2 Tax=Rotaria sp. Silwood1 TaxID=2762511 RepID=A0A821QYT5_9BILA)

HSP 1 Score: 117 bits (293), Expect = 1.760e-27
Identity = 65/155 (41.94%), Postives = 95/155 (61.29%), Query Frame = 0
Query:    2 LRLRNNDSVNRRLKLLPMDSLNFTVSGPRSPHKLRALKQTKVAPGMEVCYVVTFKPQEVRAYSAELFVVTEREKFVVPVEAVGHRAVLDFPDKVVMPHTAVKAAGTKNIL-VRNLGTRAASVSLSCQPAGTFSIEPPQVVVPMGESAQLELGFNP 155
            L LRNND V R +K+  +D+  FT+  P + ++       KVAPG+ + + + FKP+E R Y+ E+ V TEREKF++P+ A+G RA+LDFPD +  P TAVK+     +L VRN+G R A   L       F + P   ++P+GES Q+ + FNP
Sbjct:  118 LLLRNNDKVARVVKVSQVDTPYFTIVAPSNAYQ-------KVAPGVALVFRIQFKPEEQRDYAHEILVATEREKFLIPIRAIGARAILDFPDSITFPTTAVKSTNMSKVLFVRNIGNREARFVLQINKP--FHVSPENGLLPVGESMQVTIDFNP 263          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig12884.2123.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FJY6_ECTSI1.680e-7577.19Hydrocephalus-inducing protein, Hydin-like protein... [more]
A0A6H5K5Z3_9PHAE7.340e-4285.11MSP domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A835YJI6_9STRA2.100e-4052.29Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
F0Y448_AURAN4.660e-3448.08Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
UPI0014257BDE1.120e-2846.71hydrocephalus-inducing protein homolog isoform X1 ... [more]
A0A813ZMT4_9BILA1.400e-2841.94Hypothetical protein n=1 Tax=Didymodactylos carnos... [more]
A0A7S0N684_9CHLO2.520e-2841.67Hypothetical protein (Fragment) n=1 Tax=Pyramimona... [more]
A0A507EKP6_9FUNG3.850e-2841.77MSP domain-containing protein n=2 Tax=Spizellomyce... [more]
A0A2K3E6E5_CHLRE9.750e-2846.54Uncharacterized protein n=4 Tax=Chlamydomonas TaxI... [more]
A0A821QYT5_9BILA1.760e-2741.94Hypothetical protein (Fragment) n=2 Tax=Rotaria sp... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 85..160
e-value: 2.7E-11
score: 45.6
coord: 1..84
e-value: 4.5E-5
score: 25.6
IPR033305Hydrocephalus-inducing-likePANTHERPTHR23053DLEC1 DELETED IN LUNG AND ESOPHAGEAL CANCER 1coord: 1..157

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig12884contigH-elongata_contig12884:3621..5261 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig12884.2123.1mRNA_H-elongata_contig12884.2123.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig12884 3621..5261 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig12884.2123.1 ID=prot_H-elongata_contig12884.2123.1|Name=mRNA_H-elongata_contig12884.2123.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=161bp
VLRLRNNDSVNRRLKLLPMDSLNFTVSGPRSPHKLRALKQTKVAPGMEVC
YVVTFKPQEVRAYSAELFVVTEREKFVVPVEAVGHRAVLDFPDKVVMPHT
AVKAAGTKNILVRNLGTRAASVSLSCQPAGTFSIEPPQVVVPMGESAQLE
LGFNPKQSVR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013783Ig-like_fold
IPR033305Hydin-like