prot_H-elongata_contig123993.1804.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig123993.1804.1
Unique Nameprot_H-elongata_contig123993.1804.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length87
Homology
BLAST of mRNA_H-elongata_contig123993.1804.1 vs. uniprot
Match: A0A6H5K275_9PHAE (Thioredoxin domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K275_9PHAE)

HSP 1 Score: 129 bits (323), Expect = 9.190e-36
Identity = 53/86 (61.63%), Postives = 75/86 (87.21%), Query Frame = 0
Query:    1 QRVRTNEDFIEVLAEHNDKVVVVKFYDKFCRACDEIRPRFEELSQSVGSDEAMFYEIEFSGSKDLCKQLGIKRLPTVQMYAGADGR 86
            Q + +N+D++  +A+H DK+VV+KFYD+FCRACDEIRPR+E+LS+S   ++A+F+++EFSG+KDLCKQLGI RLPTVQ+Y G +GR
Sbjct:   80 QAIDSNDDYVSAMAQHEDKLVVIKFYDQFCRACDEIRPRYEDLSRSQPEEDAVFFDVEFSGAKDLCKQLGIMRLPTVQIYDGTNGR 165          
BLAST of mRNA_H-elongata_contig123993.1804.1 vs. uniprot
Match: A0A7S4A7N2_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A7N2_9STRA)

HSP 1 Score: 89.0 bits (219), Expect = 1.010e-19
Identity = 41/68 (60.29%), Postives = 52/68 (76.47%), Query Frame = 0
Query:   18 DKVVVVKFYDKFCRACDEIRPRFEELSQSVGSDEAMFYEIEFSGSKDLCKQLGIKRLPTVQMYAGADG 85
            DKVV +KFY  +CRAC  I PRFE L++  G +EA FYEIEFS +KDLC++L IK+LP VQ + GA+G
Sbjct:  131 DKVVAIKFYAGWCRACKTIAPRFERLAKEFG-EEAAFYEIEFSANKDLCRRLDIKKLPCVQFFRGAEG 197          
BLAST of mRNA_H-elongata_contig123993.1804.1 vs. uniprot
Match: F0YB20_AURAN (Thioredoxin domain-containing protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YB20_AURAN)

HSP 1 Score: 83.6 bits (205), Expect = 3.940e-19
Identity = 35/69 (50.72%), Postives = 50/69 (72.46%), Query Frame = 0
Query:   17 NDKVVVVKFYDKFCRACDEIRPRFEELSQSVGSDEAMFYEIEFSGSKDLCKQLGIKRLPTVQMYAGADG 85
            +D++V VKFY  +CRAC  I PRFE L++    DE  F+EIEF+ +K+LC++L IK+LP VQ + G+ G
Sbjct:   19 DDRLVAVKFYASWCRACKSIAPRFERLAKEFAGDEVQFFEIEFAANKELCRRLNIKKLPCVQYFRGSLG 87          
BLAST of mRNA_H-elongata_contig123993.1804.1 vs. uniprot
Match: A0A7S1T5P7_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1T5P7_9RHOD)

HSP 1 Score: 75.5 bits (184), Expect = 6.720e-15
Identity = 35/86 (40.70%), Postives = 56/86 (65.12%), Query Frame = 0
Query:    1 QRVRTNEDFIEVLAEHNDKVVVVKFYDKFCRACDEIRPRFEELSQSVGSDEAMFYEIEFSGSKDLCKQLGIKRLPTVQMYAGADGR 86
            +R+ + EDF+E+L E  + +VV+KF+   CRAC  + P+F + +Q     E +F EI+++  K+LC +LG+  LP VQ Y+G  GR
Sbjct:   88 RRLNSTEDFLEMLEEGRNTLVVIKFFASSCRACKAVAPKFVKAAQEF--PEFLFCEIDYAELKELCWRLGVLHLPHVQFYSGERGR 171          
BLAST of mRNA_H-elongata_contig123993.1804.1 vs. uniprot
Match: A0A7S2GHN9_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2GHN9_9EUKA)

HSP 1 Score: 67.0 bits (162), Expect = 1.650e-11
Identity = 28/73 (38.36%), Postives = 44/73 (60.27%), Query Frame = 0
Query:   14 AEHNDKVVVVKFYDKFCRACDEIRPRFEELSQSVGSDEAMFYEIEFSGSKDLCKQLGIKRLPTVQMYAGADGR 86
            A   ++ V +K Y  +CRAC  + P++E +++        FYEI F  +K LCK LGIK LP +++ AG+ G+
Sbjct:   81 AAREERTVCIKIYATWCRACKAMGPKYERIAKDPEYSHVEFYEIAFDDNKALCKSLGIKVLPVIEVVAGSKGK 153          
BLAST of mRNA_H-elongata_contig123993.1804.1 vs. uniprot
Match: A0A0K9NUL0_ZOSMR (Putative Thioredoxin n=1 Tax=Zostera marina TaxID=29655 RepID=A0A0K9NUL0_ZOSMR)

HSP 1 Score: 66.6 bits (161), Expect = 1.940e-11
Identity = 30/84 (35.71%), Postives = 54/84 (64.29%), Query Frame = 0
Query:    3 VRTNEDFIEVLAEHNDKVVVVKFYDKFCRACDEIRPRFEELSQSVGSDEAMFYEIEFSGSKDLCKQLGIKRLPTVQMYAGADGR 86
            V + E+F++VL E NDK+VVV+FY  +C +C  + P+  ++++     + +F ++ F  +K +CK+L ++ LP    Y GADG+
Sbjct:   80 VHSIEEFLQVLNEANDKLVVVEFYGTWCGSCRALFPKLCKIAEE--HPDIVFAKVNFDENKPMCKRLNVRVLPFFHFYRGADGQ 161          
BLAST of mRNA_H-elongata_contig123993.1804.1 vs. uniprot
Match: A0A8J5X1A3_DIALT (Thioredoxin domain-containing protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5X1A3_DIALT)

HSP 1 Score: 64.7 bits (156), Expect = 3.240e-11
Identity = 27/66 (40.91%), Postives = 48/66 (72.73%), Query Frame = 0
Query:   17 NDKVVVVKFYDKFCRACDEIRPRFEELSQSVGSDEAMFYEIEFSGSKDLCKQLGIKRLPTVQMYAG 82
            ++++VVVK+Y  +CRAC  + P+ E+++++  +    FYE+EF  +K LCK+LGIK LP ++++ G
Sbjct:   26 DEQLVVVKYYASWCRACKALGPKVEKIARNHPN--VRFYELEFEANKALCKELGIKVLPWIEIFKG 89          
BLAST of mRNA_H-elongata_contig123993.1804.1 vs. uniprot
Match: UPI001CC81DA8 (thioredoxin-like 2, chloroplastic n=1 Tax=Telopea speciosissima TaxID=54955 RepID=UPI001CC81DA8)

HSP 1 Score: 65.1 bits (157), Expect = 8.770e-11
Identity = 28/84 (33.33%), Postives = 51/84 (60.71%), Query Frame = 0
Query:    3 VRTNEDFIEVLAEHNDKVVVVKFYDKFCRACDEIRPRFEELSQSVGSDEAMFYEIEFSGSKDLCKQLGIKRLPTVQMYAGADGR 86
            + + E+F+ VL+E  DK+VVV+FY  +C +C  + P+  + ++     + +F ++ F  +K +C+ L +K LP    Y GADG+
Sbjct:   89 IHSTEEFLRVLSEAGDKLVVVEFYGTWCASCRALFPKLCKTAEE--HPDILFLKVNFDENKPMCRSLNVKVLPYFHFYRGADGQ 170          
BLAST of mRNA_H-elongata_contig123993.1804.1 vs. uniprot
Match: A0A7S3ATR9_9EUKA (Hypothetical protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3ATR9_9EUKA)

HSP 1 Score: 63.2 bits (152), Expect = 2.650e-10
Identity = 29/73 (39.73%), Postives = 45/73 (61.64%), Query Frame = 0
Query:   14 AEHNDKVVVVKFYDKFCRACDEIRPRFEELSQSVGSDEAMFYEIEFSGSKDLCKQLGIKRLPTVQMYAGADGR 86
            A   ++VVV+KF+  +CRAC  + P+F  ++      E  F+EI F  +K LCK LGIK LP +++  G+ G+
Sbjct:   71 ATRENRVVVIKFFASWCRACKAMSPKFTRIADDWPDVE--FHEIMFDNNKKLCKSLGIKILPYIEIIGGSGGK 141          
BLAST of mRNA_H-elongata_contig123993.1804.1 vs. uniprot
Match: A0A7S3X6W1_9SPIT (Hypothetical protein (Fragment) n=2 Tax=Choreotrichia TaxID=141411 RepID=A0A7S3X6W1_9SPIT)

HSP 1 Score: 63.9 bits (154), Expect = 3.190e-10
Identity = 30/83 (36.14%), Postives = 52/83 (62.65%), Query Frame = 0
Query:    1 QRVRTNEDFIEVLAEHNDK-VVVVKFYDKFCRACDEIRPRFEELSQSVGSDEAMFYEIEFSGSKDLCKQLGIKRLPTVQMYAG 82
            Q +R  ED    L +  DK +VVVKFY ++C++C  I+PRFE ++  + S+   FYE++++  K  C++  ++ +P V +Y G
Sbjct:  142 QPIRCVEDLEAALKKAGDKRLVVVKFYARWCKSCKAIKPRFERVATKL-SNSCDFYEVDYAAHKAFCERCHVRFMPCVHIYKG 223          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig123993.1804.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K275_9PHAE9.190e-3661.63Thioredoxin domain-containing protein n=2 Tax=Ecto... [more]
A0A7S4A7N2_9STRA1.010e-1960.29Hypothetical protein n=2 Tax=Pelagomonas calceolat... [more]
F0YB20_AURAN3.940e-1950.72Thioredoxin domain-containing protein (Fragment) n... [more]
A0A7S1T5P7_9RHOD6.720e-1540.70Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
A0A7S2GHN9_9EUKA1.650e-1138.36Hypothetical protein (Fragment) n=1 Tax=Haptolina ... [more]
A0A0K9NUL0_ZOSMR1.940e-1135.71Putative Thioredoxin n=1 Tax=Zostera marina TaxID=... [more]
A0A8J5X1A3_DIALT3.240e-1140.91Thioredoxin domain-containing protein n=1 Tax=Diac... [more]
UPI001CC81DA88.770e-1133.33thioredoxin-like 2, chloroplastic n=1 Tax=Telopea ... [more]
A0A7S3ATR9_9EUKA2.650e-1039.73Hypothetical protein n=1 Tax=Haptolina ericina Tax... [more]
A0A7S3X6W1_9SPIT3.190e-1036.14Hypothetical protein (Fragment) n=2 Tax=Choreotric... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.30.10coord: 1..86
e-value: 1.0E-16
score: 62.7
NoneNo IPR availablePANTHERPTHR43601FAMILY NOT NAMEDcoord: 3..86
NoneNo IPR availablePANTHERPTHR43601:SF10THIOREDOXIN-LIKE 2-2, CHLOROPLASTICcoord: 3..86
IPR013766Thioredoxin domainPFAMPF00085Thioredoxincoord: 4..81
e-value: 1.4E-13
score: 50.7
IPR013766Thioredoxin domainPROSITEPS51352THIOREDOXIN_2coord: 1..86
score: 8.802
IPR036249Thioredoxin-like superfamilySUPERFAMILY52833Thioredoxin-likecoord: 4..81

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig123993contigH-elongata_contig123993:696..1940 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig123993.1804.1mRNA_H-elongata_contig123993.1804.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig123993 696..1940 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig123993.1804.1 ID=prot_H-elongata_contig123993.1804.1|Name=mRNA_H-elongata_contig123993.1804.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=87bp
QRVRTNEDFIEVLAEHNDKVVVVKFYDKFCRACDEIRPRFEELSQSVGSD
EAMFYEIEFSGSKDLCKQLGIKRLPTVQMYAGADGR*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013766Thioredoxin_domain
IPR036249Thioredoxin-like_sf