prot_H-elongata_contig121705.1659.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig121705.1659.1
Unique Nameprot_H-elongata_contig121705.1659.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length133
Homology
BLAST of mRNA_H-elongata_contig121705.1659.1 vs. uniprot
Match: D8LRW3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRW3_ECTSI)

HSP 1 Score: 193 bits (491), Expect = 1.340e-54
Identity = 99/128 (77.34%), Postives = 109/128 (85.16%), Query Frame = 0
Query:    1 MECWHERGGILVMSYTVFRIMA--SLAGDDGERSRKLILDPGPDVVIADEAHLLKNEEAKVTVAIKKVRTKRRVALTGSPLQNNLVEYYTMVDFVRKGMLGNLYRFKSYFEAPILNGMLVDSSPEDVK 126
            ME WHERGGILVMSY++F  M       +  ERSR  +LDPGPDVV+ADEAHLLKNE A+VT AIKK+RT+RRVALTGSPLQNNLVEYYTMVDFVRKGMLG L RFK+YFEAPI+NGMLVDSSP DVK
Sbjct: 1923 MEQWHERGGILVMSYSIFLNMTRNGAKSERVERSRAFLLDPGPDVVVADEAHLLKNEGAQVTQAIKKIRTRRRVALTGSPLQNNLVEYYTMVDFVRKGMLGTLERFKNYFEAPIVNGMLVDSSPYDVK 2050          
BLAST of mRNA_H-elongata_contig121705.1659.1 vs. uniprot
Match: A0A6H5KF11_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF11_9PHAE)

HSP 1 Score: 188 bits (478), Expect = 7.570e-53
Identity = 96/128 (75.00%), Postives = 108/128 (84.38%), Query Frame = 0
Query:    1 MECWHERGGILVMSYTVFRIMA--SLAGDDGERSRKLILDPGPDVVIADEAHLLKNEEAKVTVAIKKVRTKRRVALTGSPLQNNLVEYYTMVDFVRKGMLGNLYRFKSYFEAPILNGMLVDSSPEDVK 126
            M  WH+RGGILVMSY++F  M       +  ERSR  +LDPGPDVV+ADEAHLLKNE A+VT AIKK+RT+RRVALTGSPLQNNLVEYYTMVDFVR+GMLG L RFK+YFEAPI+NGMLVDSSP DVK
Sbjct: 1803 MNQWHKRGGILVMSYSIFLNMTRNGAKSERVERSRAFLLDPGPDVVVADEAHLLKNEGAQVTQAIKKIRTRRRVALTGSPLQNNLVEYYTMVDFVRQGMLGTLERFKNYFEAPIVNGMLVDSSPYDVK 1930          
BLAST of mRNA_H-elongata_contig121705.1659.1 vs. uniprot
Match: A0A388M5Y6_CHABU (ATP-dependent helicase ATRX n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388M5Y6_CHABU)

HSP 1 Score: 137 bits (346), Expect = 4.580e-35
Identity = 65/127 (51.18%), Postives = 93/127 (73.23%), Query Frame = 0
Query:    4 WHERGGILVMSYTVFRIMASLAGDDGERSR----KLILDPGPDVVIADEAHLLKNEEAKVTVAIKKVRTKRRVALTGSPLQNNLVEYYTMVDFVRKGMLGNLYRFKSYFEAPILNGMLVDSSPEDVK 126
            WH  GG++++ Y  FR ++      G++ R    + + DPGPD++I DEAH++KNE+A +T A+K VR++RR+ALTGSPLQNNL+EYY MVDFVR+G LG    F++ F+ PI NG L DS+P+DV+
Sbjct: 2810 WHVNGGVMLVGYAAFRNLSMGRNVKGKKIRDSMVRSLQDPGPDMLICDEAHMIKNEKADITQALKLVRSRRRIALTGSPLQNNLMEYYCMVDFVREGFLGKPKDFRNRFQNPITNGQLADSTPKDVR 2936          
BLAST of mRNA_H-elongata_contig121705.1659.1 vs. uniprot
Match: UPI00148FBD27 (transcriptional regulator ATRX-like n=1 Tax=Notolabrus celidotus TaxID=1203425 RepID=UPI00148FBD27)

HSP 1 Score: 134 bits (338), Expect = 5.370e-34
Identity = 59/131 (45.04%), Postives = 97/131 (74.05%), Query Frame = 0
Query:    1 MECWHERGGILVMSYTVFRIMA---SLAGDDGERS-RKLILDPGPDVVIADEAHLLKNEEAKVTVAIKKVRTKRRVALTGSPLQNNLVEYYTMVDFVRKGMLGNLYRFKSYFEAPILNGMLVDSSPEDVKV 127
            ++ W   GG+++M Y ++R ++    ++  DG++  R+L++DPGPD+V+ DE H+LKNE +K++ A+  ++T+RRV LTG+PLQNNL EY+ MV+F++K +LG+L  F++ F  PI NG   DS+P+DV+V
Sbjct: 1128 LQKWQREGGVIIMGYEMYRNLSLAQKISNVDGKKEIRRLLVDPGPDIVVCDEGHILKNESSKISKAMNAIKTRRRVVLTGTPLQNNLTEYHCMVNFIKKNLLGSLKEFRNRFINPIQNGQCADSTPKDVRV 1258          
BLAST of mRNA_H-elongata_contig121705.1659.1 vs. uniprot
Match: UPI000854380D (transcriptional regulator ATRX-like n=1 Tax=Nanorana parkeri TaxID=125878 RepID=UPI000854380D)

HSP 1 Score: 125 bits (313), Expect = 6.960e-34
Identity = 57/131 (43.51%), Postives = 91/131 (69.47%), Query Frame = 0
Query:    1 MECWHERGGILVMSYTVFRIMASLAGDDGERSRKL----ILDPGPDVVIADEAHLLKNEEAKVTVAIKKVRTKRRVALTGSPLQNNLVEYYTMVDFVRKGMLGNLYRFKSYFEAPILNGMLVDSSPEDVKV 127
            M+ WH+ GG+LV+ Y ++R +        ++ ++L    ++DPGPD V+ DE H+LKNE + ++ A+  +RTKRR+ LTG+PLQNNLVEY+ MV+F+++ +LG++  F++ F  PI NG   DS+  DV+V
Sbjct:   17 MQRWHDNGGVLVLGYEMYRNLTQGRNVKSKKLKELYQKTLVDPGPDFVVCDEGHVLKNEASAISKAMNSIRTKRRIILTGTPLQNNLVEYHCMVNFIKENLLGSIKEFRNRFINPIQNGQCADSTMVDVRV 147          
BLAST of mRNA_H-elongata_contig121705.1659.1 vs. uniprot
Match: UPI001FB0387A (transcriptional regulator ATRX n=2 Tax=Hippoglossus TaxID=8266 RepID=UPI001FB0387A)

HSP 1 Score: 133 bits (335), Expect = 1.360e-33
Identity = 58/131 (44.27%), Postives = 94/131 (71.76%), Query Frame = 0
Query:    1 MECWHERGGILVMSYTVFRIMASLAGDDGERSR----KLILDPGPDVVIADEAHLLKNEEAKVTVAIKKVRTKRRVALTGSPLQNNLVEYYTMVDFVRKGMLGNLYRFKSYFEAPILNGMLVDSSPEDVKV 127
            ++ W   GG+++M Y ++RI++S    + E  +    K+++DPGPD VI DE H+L+NE + ++ A+  +RT+RRV LTG+P+QNNLVEY+ MV+F++K +LG+L  F++ F  PI NG   DS+P+DV++
Sbjct: 1206 LQAWQREGGVMIMGYELYRILSSAKNMNNEECKTQLKKILVDPGPDFVICDEGHILRNESSGISKALNGIRTRRRVVLTGTPMQNNLVEYHCMVNFIKKNLLGSLGEFRNRFINPIENGQCADSTPKDVRI 1336          
BLAST of mRNA_H-elongata_contig121705.1659.1 vs. uniprot
Match: A0A3B4ZYT5_9TELE (DNA helicase n=2 Tax=Stegastes partitus TaxID=144197 RepID=A0A3B4ZYT5_9TELE)

HSP 1 Score: 132 bits (331), Expect = 4.710e-33
Identity = 58/131 (44.27%), Postives = 98/131 (74.81%), Query Frame = 0
Query:    1 MECWHERGGILVMSYTVFRIMA---SLAGDDGERSRK-LILDPGPDVVIADEAHLLKNEEAKVTVAIKKVRTKRRVALTGSPLQNNLVEYYTMVDFVRKGMLGNLYRFKSYFEAPILNGMLVDSSPEDVKV 127
            ++ WH+ GG+++MSY ++RI++   S+  ++ ++  K  ++DPGPD V+ DE H+L+NE + ++ A+  ++T+RR+ LTG+PLQNNLVEY+ MV+F++K +LG+L  F++ F  PI NG   DS+P+DV+V
Sbjct: 1199 LQQWHKHGGVMIMSYELYRILSLGNSIKNEEWKKELKSALVDPGPDFVVCDEGHILRNERSNISKAMNAIKTQRRLVLTGTPLQNNLVEYHCMVNFIKKNLLGSLGEFRNRFINPIQNGQCADSTPKDVRV 1329          
BLAST of mRNA_H-elongata_contig121705.1659.1 vs. uniprot
Match: A7SUV1_NEMVE (Predicted protein (Fragment) n=1 Tax=Nematostella vectensis TaxID=45351 RepID=A7SUV1_NEMVE)

HSP 1 Score: 131 bits (329), Expect = 6.250e-33
Identity = 62/126 (49.21%), Postives = 89/126 (70.63%), Query Frame = 0
Query:    4 WHERGGILVMSYTVFRIMA--SLAGDDGERSRKLILDPGPDVVIADEAHLLKNEEAKVTVAIKKVRTKRRVALTGSPLQNNLVEYYTMVDFVRKGMLGNLYRFKSYFEAPILNGMLVDSSPEDVKV 127
            W+E GG+L++ Y ++RI+A  +      +  +K +  PGPD+VI DE H +KN +A ++ A+KK++T+RRV LTG PLQNNLVEY+ MVDFVR   LGN + F + FE PI+NG   DS+P D+K+
Sbjct:  124 WNESGGVLLIGYELYRILALSTPCMASNKCIQKALCKPGPDLVICDEGHRIKNNQANISHALKKIKTRRRVVLTGYPLQNNLVEYWCMVDFVRPNFLGNRHEFSNMFERPIMNGQCCDSTPADMKL 249          
BLAST of mRNA_H-elongata_contig121705.1659.1 vs. uniprot
Match: UPI00097D0012 (transcriptional regulator ATRX-like isoform X1 n=2 Tax=Paralichthys olivaceus TaxID=8255 RepID=UPI00097D0012)

HSP 1 Score: 131 bits (330), Expect = 6.440e-33
Identity = 59/131 (45.04%), Postives = 96/131 (73.28%), Query Frame = 0
Query:    1 MECWHERGGILVMSYTVFRIMASLAGDDGERSRK----LILDPGPDVVIADEAHLLKNEEAKVTVAIKKVRTKRRVALTGSPLQNNLVEYYTMVDFVRKGMLGNLYRFKSYFEAPILNGMLVDSSPEDVKV 127
            ++ WH  GG+++M Y ++RI+ SLA +  E  +K    +++DPGPD V+ DE H+L+N+ + ++ A+  +RT+RRV LTG+P+QNNLVEY+ MV+F++K +LG+L  F++ F  PI NG   DS+P+DV++
Sbjct: 1219 LQEWHREGGVMIMGYDIYRIL-SLAKNMNEEWKKQLKTILVDPGPDFVVCDEGHILRNDSSGISKALNGIRTRRRVVLTGTPMQNNLVEYHCMVNFIKKNLLGSLGEFRNRFINPIENGQCADSTPKDVRI 1348          
BLAST of mRNA_H-elongata_contig121705.1659.1 vs. uniprot
Match: A0A3Q2ZWV0_KRYMA (DNA helicase n=1 Tax=Kryptolebias marmoratus TaxID=37003 RepID=A0A3Q2ZWV0_KRYMA)

HSP 1 Score: 130 bits (327), Expect = 1.630e-32
Identity = 58/131 (44.27%), Postives = 93/131 (70.99%), Query Frame = 0
Query:    1 MECWHERGGILVMSYTVFRIMASLAGDDGERSRKLI----LDPGPDVVIADEAHLLKNEEAKVTVAIKKVRTKRRVALTGSPLQNNLVEYYTMVDFVRKGMLGNLYRFKSYFEAPILNGMLVDSSPEDVKV 127
            ++ W   GG+L+M Y ++R ++     D + ++KL+    +DPGPD V+ DE H+L+NE ++++ A+  +RT+RR+ LTG+PLQNNLVEY+ MV F++K +LG+L  F++ F  PI NG   DS+P+DV+V
Sbjct: 1208 LQKWQRNGGVLIMGYDMYRNLSKDCTIDSQEAKKLLKSTLVDPGPDFVVCDEGHILRNEASRISKAMNTIRTQRRLVLTGTPLQNNLVEYHCMVSFIKKNLLGSLSEFRNRFINPIQNGQCADSTPKDVRV 1338          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig121705.1659.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LRW3_ECTSI1.340e-5477.34Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KF11_9PHAE7.570e-5375.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A388M5Y6_CHABU4.580e-3551.18ATP-dependent helicase ATRX n=1 Tax=Chara braunii ... [more]
UPI00148FBD275.370e-3445.04transcriptional regulator ATRX-like n=1 Tax=Notola... [more]
UPI000854380D6.960e-3443.51transcriptional regulator ATRX-like n=1 Tax=Nanora... [more]
UPI001FB0387A1.360e-3344.27transcriptional regulator ATRX n=2 Tax=Hippoglossu... [more]
A0A3B4ZYT5_9TELE4.710e-3344.27DNA helicase n=2 Tax=Stegastes partitus TaxID=1441... [more]
A7SUV1_NEMVE6.250e-3349.21Predicted protein (Fragment) n=1 Tax=Nematostella ... [more]
UPI00097D00126.440e-3345.04transcriptional regulator ATRX-like isoform X1 n=2... [more]
A0A3Q2ZWV0_KRYMA1.630e-3244.27DNA helicase n=1 Tax=Kryptolebias marmoratus TaxID... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000330SNF2-related, N-terminal domainPFAMPF00176SNF2_Ncoord: 5..114
e-value: 6.0E-20
score: 71.2
IPR038718SNF2-like, N-terminal domain superfamilyGENE3D3.40.50.10810coord: 1..129
e-value: 6.3E-31
score: 109.1
NoneNo IPR availablePANTHERPTHR45797FAMILY NOT NAMEDcoord: 4..126
IPR014001Helicase superfamily 1/2, ATP-binding domainPROSITEPS51192HELICASE_ATP_BIND_1coord: 1..96
score: 10.258
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 8..126

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig121705contigH-elongata_contig121705:763..1438 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig121705.1659.1mRNA_H-elongata_contig121705.1659.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig121705 748..1438 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig121705.1659.1 ID=prot_H-elongata_contig121705.1659.1|Name=mRNA_H-elongata_contig121705.1659.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=133bp
MECWHERGGILVMSYTVFRIMASLAGDDGERSRKLILDPGPDVVIADEAH
LLKNEEAKVTVAIKKVRTKRRVALTGSPLQNNLVEYYTMVDFVRKGMLGN
LYRFKSYFEAPILNGMLVDSSPEDVKVRGVCY*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000330SNF2_N
IPR038718SNF2-like_sf
IPR014001Helicase_ATP-bd
IPR027417P-loop_NTPase