prot_H-elongata_contig121695.1657.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig121695.1657.1
Unique Name	prot_H-elongata_contig121695.1657.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	167

Homology

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BLAST of mRNA_H-elongata_contig121695.1657.1 vs. uniprot
Match: A0A6H5JHM3_9PHAE (ADP/ATP translocase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHM3_9PHAE)

HSP 1 Score: 305 bits (781), Expect = 1.780e-102
Identity = 145/166 (87.35%), Postives = 156/166 (93.98%), Query Frame = 0

Query:    1 RTRLASDVGTGKRDFNGLWDCLSKTARGPKGFMGLYNGFGVSVMGIIPYRGVYFGLYDTFREKNPFKDDKGVKGVLSKFAIAQSVAIASGYASYPFDTVRRRLQMQSEKPPEEWLYKGTGDCFRKIVKDEGMAALFKGAGANALRTVGSALVLVMYDQMKTVFNLH 166
            RTRLASDVG+GKRDF+GLWDCLS+TA+GPKG  GLYNGFGVSVMGIIPYRGVYFGLYDTFREKNPFK+DKG KG+LSKF IAQ+VAIASGYASYPFDT+RRRLQMQSEKPP +WLY GT DCF KI+K+EG AALFKGAGANALRTVGSALVLVMYDQMKTV NLH
Sbjct:  140 RTRLASDVGSGKRDFSGLWDCLSRTAKGPKGVAGLYNGFGVSVMGIIPYRGVYFGLYDTFREKNPFKNDKGAKGLLSKFCIAQTVAIASGYASYPFDTIRRRLQMQSEKPPAQWLYNGTTDCFAKIIKEEGGAALFKGAGANALRTVGSALVLVMYDQMKTVLNLH 305

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BLAST of mRNA_H-elongata_contig121695.1657.1 vs. uniprot
Match: A0A836CBW4_9STRA (ADP/ATP translocase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBW4_9STRA)

HSP 1 Score: 285 bits (728), Expect = 2.150e-94
Identity = 137/166 (82.53%), Postives = 146/166 (87.95%), Query Frame = 0

Query:    1 RTRLASDVGTGKRDFNGLWDCLSKTARGPKGFMGLYNGFGVSVMGIIPYRGVYFGLYDTFREKNPFKDDKGVKGVLSKFAIAQSVAIASGYASYPFDTVRRRLQMQSEKPPEEWLYKGTGDCFRKIVKDEGMAALFKGAGANALRTVGSALVLVMYDQMKTVFNLH 166
            RTRLASDVGTGKRDFNGL DCL KTA GPKG +GLYNGFGVSV GIIPYRGVYFGLYD+ REKNPFKDDKG+ GVLSKF IAQ VAIA+GYASYPFDTVRRRLQMQSEKP  +W+Y  T DCF+KI KDEG  A FKGAGANALRTVGSALVLVMYDQ KT+ N+H
Sbjct:  142 RTRLASDVGTGKRDFNGLADCLKKTASGPKGILGLYNGFGVSVTGIIPYRGVYFGLYDSAREKNPFKDDKGLMGVLSKFGIAQFVAIAAGYASYPFDTVRRRLQMQSEKPKADWIYANTMDCFKKIAKDEGTGAFFKGAGANALRTVGSALVLVMYDQFKTILNMH 307

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BLAST of mRNA_H-elongata_contig121695.1657.1 vs. uniprot
Match: A8E615_XENLA (ADP/ATP translocase n=1 Tax=Xenopus laevis TaxID=8355 RepID=A8E615_XENLA)

HSP 1 Score: 275 bits (703), Expect = 1.300e-90
Identity = 128/166 (77.11%), Postives = 147/166 (88.55%), Query Frame = 0

Query:    1 RTRLASDVGTGKRDFNGLWDCLSKTARGPKGFMGLYNGFGVSVMGIIPYRGVYFGLYDTFREKNPFKDDKGVKGVLSKFAIAQSVAIASGYASYPFDTVRRRLQMQSEKPPEEWLYKGTGDCFRKIVKDEGMAALFKGAGANALRTVGSALVLVMYDQMKTVFNLH 166
            RTRLASDVG+G RDFNGL DCL KTARGPKG +GLYNGFGVSV GIIPYRGVYFG+YD+ REKNP+K D G+ G+ SKFA+AQ  AI +GYASYPFDT+RRRLQMQSEKP E+WLYKGT DCF KI+K+EG+ A+FKGAGANALRTVGSA+VLV+YDQ+K + NLH
Sbjct:  141 RTRLASDVGSGARDFNGLGDCLVKTARGPKGILGLYNGFGVSVAGIIPYRGVYFGMYDSLREKNPYKKDTGIIGLASKFAVAQFTAICAGYASYPFDTIRRRLQMQSEKPKEQWLYKGTVDCFGKIMKNEGVTAMFKGAGANALRTVGSAMVLVLYDQLKAIMNLH 306

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BLAST of mRNA_H-elongata_contig121695.1657.1 vs. uniprot
Match: D7FR66_ECTSI (ADP/ATP translocase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FR66_ECTSI)

HSP 1 Score: 271 bits (692), Expect = 5.890e-89
Identity = 130/165 (78.79%), Postives = 144/165 (87.27%), Query Frame = 0

Query:    1 RTRLASDVGTGKRDFNGLWDCLSKTARGPKGFMGLYNGFGVSVMGIIPYRGVYFGLYDTFREKNPFKDDKGVKGVLSKFAIAQSVAIASGYASYPFDTVRRRLQMQSEKPPEEWLYKGTGDCFRKIVKDEGMAALFKGAGANALRTVGSALVLVMYDQMKTVFNL 165
            RTRLASDVG+GKRDF GLWDCLSKTARGPKG +GLYNGFGVSVMGIIPYRGVYFGLYDT   KNPFK+D G+KG+ SKFAIAQ+ AI +GYASYPFDTVRRRLQMQSEKP  EW Y+G  DC +KI+K+EG +ALFKGA AN LRTVGSA+VLVMYDQ KT+  L
Sbjct:  140 RTRLASDVGSGKRDFTGLWDCLSKTARGPKGVLGLYNGFGVSVMGIIPYRGVYFGLYDTGSAKNPFKNDTGIKGMTSKFAIAQATAITAGYASYPFDTVRRRLQMQSEKPRSEWHYQGALDCLKKILKEEGNSALFKGASANVLRTVGSAMVLVMYDQFKTLMAL 304

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BLAST of mRNA_H-elongata_contig121695.1657.1 vs. uniprot
Match: F2DZ59_HORVV (ADP/ATP translocase n=1 Tax=Hordeum vulgare subsp. vulgare TaxID=112509 RepID=F2DZ59_HORVV)

HSP 1 Score: 269 bits (688), Expect = 6.360e-88
Identity = 126/166 (75.90%), Postives = 148/166 (89.16%), Query Frame = 0

Query:    1 RTRLASDVGTGKRDFNGLWDCLSKTARGPKGFMGLYNGFGVSVMGIIPYRGVYFGLYDTFREKNPFKDDKGVKGVLSKFAIAQSVAIASGYASYPFDTVRRRLQMQSEKPPEEWLYKGTGDCFRKIVKDEGMAALFKGAGANALRTVGSALVLVMYDQMKTVFNLH 166
            RTRLASDVGTGKRDF GL DCL KTARGP+G +GLYNGFGVSV GIIPYRGVYFGLYD+ REKNP+K+D GV G+ SKFA+AQ+ AIA+GYASYPFDTVRRRLQMQSEKP E+W+YK + DC  K++K+EGM+ALFKGAGANALRTVGSALVLV+YDQ++ +  ++
Sbjct:  164 RTRLASDVGTGKRDFKGLGDCLVKTARGPRGVLGLYNGFGVSVAGIIPYRGVYFGLYDSLREKNPYKNDFGVMGMASKFAVAQTTAIAAGYASYPFDTVRRRLQMQSEKPKEQWVYKSSMDCLTKVIKEEGMSALFKGAGANALRTVGSALVLVLYDQLQGILGIN 329

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BLAST of mRNA_H-elongata_contig121695.1657.1 vs. uniprot
Match: A0A6A5B5S1_NAEFO (ADP/ATP translocase n=1 Tax=Naegleria fowleri TaxID=5763 RepID=A0A6A5B5S1_NAEFO)

HSP 1 Score: 264 bits (675), Expect = 3.170e-86
Identity = 127/166 (76.51%), Postives = 146/166 (87.95%), Query Frame = 0

Query:    1 RTRLASDVGTGKRDFNGLWDCLSKTARGPKGFMGLYNGFGVSVMGIIPYRGVYFGLYDTFREKNPFKDDKGVKGVLSKFAIAQSVAIASGYASYPFDTVRRRLQMQSEKPPEEWLYKGTGDCFRKIVKDEGMAALFKGAGANALRTVGSALVLVMYDQMKTVFNLH 166
            RTRLASDVG   RDF GL DCL KTARGP+G +GLYNGFGVSV GIIPYRGVYFGLYD+ REKNP+K+D GV GV+SKF +AQ+ AIA+GYASYPFDTVRRRLQMQSEKP E+W+YKGT DCF KI+K+EGM A+FKGAGANALRTVGSALVLV+YDQM+ +  ++
Sbjct:  145 RTRLASDVGK-NRDFKGLGDCLVKTARGPRGVLGLYNGFGVSVAGIIPYRGVYFGLYDSLREKNPYKNDLGVLGVVSKFVVAQTTAIAAGYASYPFDTVRRRLQMQSEKPKEQWIYKGTADCFTKILKEEGMNAMFKGAGANALRTVGSALVLVLYDQMQGLLGVN 309

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BLAST of mRNA_H-elongata_contig121695.1657.1 vs. uniprot
Match: D2W4U4_NAEGR (ADP/ATP translocase n=1 Tax=Naegleria gruberi TaxID=5762 RepID=D2W4U4_NAEGR)

HSP 1 Score: 263 bits (672), Expect = 7.970e-86
Identity = 126/166 (75.90%), Postives = 147/166 (88.55%), Query Frame = 0

Query:    1 RTRLASDVGTGKRDFNGLWDCLSKTARGPKGFMGLYNGFGVSVMGIIPYRGVYFGLYDTFREKNPFKDDKGVKGVLSKFAIAQSVAIASGYASYPFDTVRRRLQMQSEKPPEEWLYKGTGDCFRKIVKDEGMAALFKGAGANALRTVGSALVLVMYDQMKTVFNLH 166
            RTRLASDVG  +R FNGL DCL+KTA+GP GFMGLYNGFGVSV GIIPYRGVYFGLYD+ REKNP+K D GV G++SKFA+AQ+ AIA+GYASYPFDTVRRRLQMQSEKP ++WLYKGT DCF KI+K+EG  A+FKGAGANALRTVGSALVLV+YDQ++ +  ++
Sbjct:  140 RTRLASDVGK-ERVFNGLADCLAKTAKGPAGFMGLYNGFGVSVAGIIPYRGVYFGLYDSLREKNPYKKDFGVMGIISKFAVAQTTAIAAGYASYPFDTVRRRLQMQSEKPKDQWLYKGTADCFTKILKEEGTQAMFKGAGANALRTVGSALVLVLYDQLQGMLGVN 304

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BLAST of mRNA_H-elongata_contig121695.1657.1 vs. uniprot
Match: A0A835ZKK3_9STRA (ADP/ATP translocase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZKK3_9STRA)

HSP 1 Score: 262 bits (670), Expect = 1.460e-85
Identity = 122/166 (73.49%), Postives = 141/166 (84.94%), Query Frame = 0

Query:    1 RTRLASDVGTGKRDFNGLWDCLSKTARGPKGFMGLYNGFGVSVMGIIPYRGVYFGLYDTFREKNPFKDDKGVKGVLSKFAIAQSVAIASGYASYPFDTVRRRLQMQSEKPPEEWLYKGTGDCFRKIVKDEGMAALFKGAGANALRTVGSALVLVMYDQMKTVFNLH 166
            RTRLA+DVG+GKRDF GLWDCL +TA GP+G + LYNGFGVSV+GIIPYRGVYFGLYD+ REKNPF+DD G+ G+LSK+A AQ V I +GYASYPFDTVRRRLQMQSEKP  +WLY GT DCFRKI  DEG  A +KGA AN +RTVG+ALVL +YDQMKT+ +LH
Sbjct:  144 RTRLAADVGSGKRDFEGLWDCLKRTASGPRGALALYNGFGVSVLGIIPYRGVYFGLYDSAREKNPFRDDPGLVGLLSKWAQAQVVTICAGYASYPFDTVRRRLQMQSEKPTSDWLYAGTRDCFRKIYHDEGFTAFYKGAWANVIRTVGAALVLTIYDQMKTIMHLH 309

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BLAST of mRNA_H-elongata_contig121695.1657.1 vs. uniprot
Match: F2E4J1_HORVV (ADP/ATP translocase n=1 Tax=Hordeum vulgare subsp. vulgare TaxID=112509 RepID=F2E4J1_HORVV)

HSP 1 Score: 260 bits (664), Expect = 1.430e-84
Identity = 124/166 (74.70%), Postives = 140/166 (84.34%), Query Frame = 0

Query:    1 RTRLASDVGTGKRDFNGLWDCLSKTARGPKGFMGLYNGFGVSVMGIIPYRGVYFGLYDTFREKNPFKDDKGVKGVLSKFAIAQSVAIASGYASYPFDTVRRRLQMQSEKPPEEWLYKGTGDCFRKIVKDEGMAALFKGAGANALRTVGSALVLVMYDQMKTVFNLH 166
            RTRLASDVG G + FNGL DCL KTARGP G +GLYNGFGVSV GIIPYRGVYFG+YD     NPFK++KG+ G+ SKFAIAQ+ AI +GYASYPFDT+RRRLQMQSEKP EEWLYKGT DCF KIVK+EG +ALFKGAGANALRTVGSALVLV+Y ++KT+    
Sbjct:  143 RTRLASDVGKGHKSFNGLADCLIKTARGPSGILGLYNGFGVSVAGIIPYRGVYFGMYDXXXXXNPFKNEKGIIGLASKFAIAQATAITAGYASYPFDTIRRRLQMQSEKPKEEWLYKGTADCFNKIVKNEGTSALFKGAGANALRTVGSALVLVLYGEIKTMLGFE 308

[Close]

BLAST of mRNA_H-elongata_contig121695.1657.1 vs. uniprot
Match: A0A6A5CF32_NAEFO (ADP/ATP translocase n=2 Tax=Naegleria TaxID=5761 RepID=A0A6A5CF32_NAEFO)

HSP 1 Score: 258 bits (660), Expect = 5.440e-84
Identity = 121/160 (75.62%), Postives = 142/160 (88.75%), Query Frame = 0

Query:    1 RTRLASDVGTGKRDFNGLWDCLSKTARGPKGFMGLYNGFGVSVMGIIPYRGVYFGLYDTFREKNPFKDDKGVKGVLSKFAIAQSVAIASGYASYPFDTVRRRLQMQSEKPPEEWLYKGTGDCFRKIVKDEGMAALFKGAGANALRTVGSALVLVMYDQMK 160
            RTRLASDVG   RDF GLWDCL KTARGP GF+GLYNGFGVSV GIIPYRGVYFGLYDT REKNP++ D G+ GV++KFA+AQ+V+IA+GYASYPFDTVRRRL MQSEKP ++W+Y+GT DCF KI+++EG  A+FKGAGANA+RTVGSALVLV+YDQ +
Sbjct:  147 RTRLASDVGN-HRDFKGLWDCLVKTARGPSGFLGLYNGFGVSVAGIIPYRGVYFGLYDTLREKNPYQSDPGIIGVITKFALAQAVSIAAGYASYPFDTVRRRLMMQSEKPKDQWIYRGTVDCFSKILREEGTKAMFKGAGANAVRTVGSALVLVLYDQFQ 305

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig121695.1657.1 vs. uniprot

BLAST of mRNA_H-elongata_contig121695.1657.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5JHM3_9PHAE	1.780e-102	87.35	ADP/ATP translocase n=1 Tax=Ectocarpus sp. CCAP 13...	[more]
A0A836CBW4_9STRA	2.150e-94	82.53	ADP/ATP translocase n=1 Tax=Tribonema minus TaxID=...	[more]
A8E615_XENLA	1.300e-90	77.11	ADP/ATP translocase n=1 Tax=Xenopus laevis TaxID=8...	[more]
D7FR66_ECTSI	5.890e-89	78.79	ADP/ATP translocase n=2 Tax=Ectocarpus TaxID=2879 ...	[more]
F2DZ59_HORVV	6.360e-88	75.90	ADP/ATP translocase n=1 Tax=Hordeum vulgare subsp....	[more]
A0A6A5B5S1_NAEFO	3.170e-86	76.51	ADP/ATP translocase n=1 Tax=Naegleria fowleri TaxI...	[more]
D2W4U4_NAEGR	7.970e-86	75.90	ADP/ATP translocase n=1 Tax=Naegleria gruberi TaxI...	[more]
A0A835ZKK3_9STRA	1.460e-85	73.49	ADP/ATP translocase n=1 Tax=Tribonema minus TaxID=...	[more]
F2E4J1_HORVV	1.430e-84	74.70	ADP/ATP translocase n=1 Tax=Hordeum vulgare subsp....	[more]
A0A6A5CF32_NAEFO	5.440e-84	75.63	ADP/ATP translocase n=2 Tax=Naegleria TaxID=5761 R...	[more]

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InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002067	Mitochondrial carrier protein	PRINTS	PR00926	MITOCARRIER	coord: 82..104 score: 51.75 coord: 36..54 score: 60.83
IPR023395	Mitochondrial carrier domain superfamily	GENE3D	1.50.40.10		coord: 1..163 e-value: 5.5E-48 score: 165.2
IPR023395	Mitochondrial carrier domain superfamily	SUPERFAMILY	103506	Mitochondrial carrier	coord: 1..159
IPR018108	Mitochondrial substrate/solute carrier	PFAM	PF00153	Mito_carr	coord: 1..62 e-value: 1.5E-11 score: 44.0 coord: 74..164 e-value: 8.4E-19 score: 67.3
IPR018108	Mitochondrial substrate/solute carrier	PROSITE	PS50920	SOLCAR	coord: 73..162 score: 23.714
IPR018108	Mitochondrial substrate/solute carrier	PROSITE	PS50920	SOLCAR	coord: 1..63 score: 14.082
None	No IPR available	PANTHER	PTHR45635	FAMILY NOT NAMED	coord: 1..164
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 57..75
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 34..56
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 1..33
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 97..166
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 76..96
None	No IPR available	TMHMM	TMhelix		coord: 74..96
None	No IPR available	TMHMM	TMhelix		coord: 32..54

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig121695	contig	H-elongata_contig121695:974..1474 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig121695.1657.1	mRNA_H-elongata_contig121695.1657.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig121695 974..1474 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig121695.1657.1 ID=prot_H-elongata_contig121695.1657.1|Name=mRNA_H-elongata_contig121695.1657.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=167bp
RTRLASDVGTGKRDFNGLWDCLSKTARGPKGFMGLYNGFGVSVMGIIPYR
GVYFGLYDTFREKNPFKDDKGVKGVLSKFAIAQSVAIASGYASYPFDTVR
RRLQMQSEKPPEEWLYKGTGDCFRKIVKDEGMAALFKGAGANALRTVGSA
LVLVMYDQMKTVFNLH*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR002067	Mit_carrier
IPR023395	Mt_carrier_dom_sf
IPR018108	Mitochondrial_sb/sol_carrier