mRNA_H-elongata_contig121695.1657.1 (mRNA) Himanthalia elongata Himel1 dioecious
|
Overview
Homology
BLAST of mRNA_H-elongata_contig121695.1657.1 vs. uniprot
Match: A0A6H5JHM3_9PHAE (ADP/ATP translocase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHM3_9PHAE) HSP 1 Score: 305 bits (781), Expect = 1.780e-102 Identity = 145/166 (87.35%), Postives = 156/166 (93.98%), Query Frame = 1
Query: 1 RTRLASDVGTGKRDFNGLWDCLSKTARGPKGFMGLYNGFGVSVMGIIPYRGVYFGLYDTFREKNPFKDDKGVKGVLSKFAIAQSVAIASGYASYPFDTVRRRLQMQSEKPPEEWLYKGTGDCFRKIVKDEGMAALFKGAGANALRTVGSALVLVMYDQMKTVFNLH 498
RTRLASDVG+GKRDF+GLWDCLS+TA+GPKG GLYNGFGVSVMGIIPYRGVYFGLYDTFREKNPFK+DKG KG+LSKF IAQ+VAIASGYASYPFDT+RRRLQMQSEKPP +WLY GT DCF KI+K+EG AALFKGAGANALRTVGSALVLVMYDQMKTV NLH
Sbjct: 140 RTRLASDVGSGKRDFSGLWDCLSRTAKGPKGVAGLYNGFGVSVMGIIPYRGVYFGLYDTFREKNPFKNDKGAKGLLSKFCIAQTVAIASGYASYPFDTIRRRLQMQSEKPPAQWLYNGTTDCFAKIIKEEGGAALFKGAGANALRTVGSALVLVMYDQMKTVLNLH 305
BLAST of mRNA_H-elongata_contig121695.1657.1 vs. uniprot
Match: A0A836CBW4_9STRA (ADP/ATP translocase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBW4_9STRA) HSP 1 Score: 285 bits (728), Expect = 2.150e-94 Identity = 137/166 (82.53%), Postives = 146/166 (87.95%), Query Frame = 1
Query: 1 RTRLASDVGTGKRDFNGLWDCLSKTARGPKGFMGLYNGFGVSVMGIIPYRGVYFGLYDTFREKNPFKDDKGVKGVLSKFAIAQSVAIASGYASYPFDTVRRRLQMQSEKPPEEWLYKGTGDCFRKIVKDEGMAALFKGAGANALRTVGSALVLVMYDQMKTVFNLH 498
RTRLASDVGTGKRDFNGL DCL KTA GPKG +GLYNGFGVSV GIIPYRGVYFGLYD+ REKNPFKDDKG+ GVLSKF IAQ VAIA+GYASYPFDTVRRRLQMQSEKP +W+Y T DCF+KI KDEG A FKGAGANALRTVGSALVLVMYDQ KT+ N+H
Sbjct: 142 RTRLASDVGTGKRDFNGLADCLKKTASGPKGILGLYNGFGVSVTGIIPYRGVYFGLYDSAREKNPFKDDKGLMGVLSKFGIAQFVAIAAGYASYPFDTVRRRLQMQSEKPKADWIYANTMDCFKKIAKDEGTGAFFKGAGANALRTVGSALVLVMYDQFKTILNMH 307
BLAST of mRNA_H-elongata_contig121695.1657.1 vs. uniprot
Match: A8E615_XENLA (ADP/ATP translocase n=1 Tax=Xenopus laevis TaxID=8355 RepID=A8E615_XENLA) HSP 1 Score: 275 bits (703), Expect = 1.300e-90 Identity = 128/166 (77.11%), Postives = 147/166 (88.55%), Query Frame = 1
Query: 1 RTRLASDVGTGKRDFNGLWDCLSKTARGPKGFMGLYNGFGVSVMGIIPYRGVYFGLYDTFREKNPFKDDKGVKGVLSKFAIAQSVAIASGYASYPFDTVRRRLQMQSEKPPEEWLYKGTGDCFRKIVKDEGMAALFKGAGANALRTVGSALVLVMYDQMKTVFNLH 498
RTRLASDVG+G RDFNGL DCL KTARGPKG +GLYNGFGVSV GIIPYRGVYFG+YD+ REKNP+K D G+ G+ SKFA+AQ AI +GYASYPFDT+RRRLQMQSEKP E+WLYKGT DCF KI+K+EG+ A+FKGAGANALRTVGSA+VLV+YDQ+K + NLH
Sbjct: 141 RTRLASDVGSGARDFNGLGDCLVKTARGPKGILGLYNGFGVSVAGIIPYRGVYFGMYDSLREKNPYKKDTGIIGLASKFAVAQFTAICAGYASYPFDTIRRRLQMQSEKPKEQWLYKGTVDCFGKIMKNEGVTAMFKGAGANALRTVGSAMVLVLYDQLKAIMNLH 306
BLAST of mRNA_H-elongata_contig121695.1657.1 vs. uniprot
Match: D7FR66_ECTSI (ADP/ATP translocase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FR66_ECTSI) HSP 1 Score: 271 bits (692), Expect = 5.890e-89 Identity = 130/165 (78.79%), Postives = 144/165 (87.27%), Query Frame = 1
Query: 1 RTRLASDVGTGKRDFNGLWDCLSKTARGPKGFMGLYNGFGVSVMGIIPYRGVYFGLYDTFREKNPFKDDKGVKGVLSKFAIAQSVAIASGYASYPFDTVRRRLQMQSEKPPEEWLYKGTGDCFRKIVKDEGMAALFKGAGANALRTVGSALVLVMYDQMKTVFNL 495
RTRLASDVG+GKRDF GLWDCLSKTARGPKG +GLYNGFGVSVMGIIPYRGVYFGLYDT KNPFK+D G+KG+ SKFAIAQ+ AI +GYASYPFDTVRRRLQMQSEKP EW Y+G DC +KI+K+EG +ALFKGA AN LRTVGSA+VLVMYDQ KT+ L
Sbjct: 140 RTRLASDVGSGKRDFTGLWDCLSKTARGPKGVLGLYNGFGVSVMGIIPYRGVYFGLYDTGSAKNPFKNDTGIKGMTSKFAIAQATAITAGYASYPFDTVRRRLQMQSEKPRSEWHYQGALDCLKKILKEEGNSALFKGASANVLRTVGSAMVLVMYDQFKTLMAL 304
BLAST of mRNA_H-elongata_contig121695.1657.1 vs. uniprot
Match: F2DZ59_HORVV (ADP/ATP translocase n=1 Tax=Hordeum vulgare subsp. vulgare TaxID=112509 RepID=F2DZ59_HORVV) HSP 1 Score: 269 bits (688), Expect = 6.360e-88 Identity = 126/166 (75.90%), Postives = 148/166 (89.16%), Query Frame = 1
Query: 1 RTRLASDVGTGKRDFNGLWDCLSKTARGPKGFMGLYNGFGVSVMGIIPYRGVYFGLYDTFREKNPFKDDKGVKGVLSKFAIAQSVAIASGYASYPFDTVRRRLQMQSEKPPEEWLYKGTGDCFRKIVKDEGMAALFKGAGANALRTVGSALVLVMYDQMKTVFNLH 498
RTRLASDVGTGKRDF GL DCL KTARGP+G +GLYNGFGVSV GIIPYRGVYFGLYD+ REKNP+K+D GV G+ SKFA+AQ+ AIA+GYASYPFDTVRRRLQMQSEKP E+W+YK + DC K++K+EGM+ALFKGAGANALRTVGSALVLV+YDQ++ + ++
Sbjct: 164 RTRLASDVGTGKRDFKGLGDCLVKTARGPRGVLGLYNGFGVSVAGIIPYRGVYFGLYDSLREKNPYKNDFGVMGMASKFAVAQTTAIAAGYASYPFDTVRRRLQMQSEKPKEQWVYKSSMDCLTKVIKEEGMSALFKGAGANALRTVGSALVLVLYDQLQGILGIN 329
BLAST of mRNA_H-elongata_contig121695.1657.1 vs. uniprot
Match: A0A6A5B5S1_NAEFO (ADP/ATP translocase n=1 Tax=Naegleria fowleri TaxID=5763 RepID=A0A6A5B5S1_NAEFO) HSP 1 Score: 264 bits (675), Expect = 3.170e-86 Identity = 127/166 (76.51%), Postives = 146/166 (87.95%), Query Frame = 1
Query: 1 RTRLASDVGTGKRDFNGLWDCLSKTARGPKGFMGLYNGFGVSVMGIIPYRGVYFGLYDTFREKNPFKDDKGVKGVLSKFAIAQSVAIASGYASYPFDTVRRRLQMQSEKPPEEWLYKGTGDCFRKIVKDEGMAALFKGAGANALRTVGSALVLVMYDQMKTVFNLH 498
RTRLASDVG RDF GL DCL KTARGP+G +GLYNGFGVSV GIIPYRGVYFGLYD+ REKNP+K+D GV GV+SKF +AQ+ AIA+GYASYPFDTVRRRLQMQSEKP E+W+YKGT DCF KI+K+EGM A+FKGAGANALRTVGSALVLV+YDQM+ + ++
Sbjct: 145 RTRLASDVGK-NRDFKGLGDCLVKTARGPRGVLGLYNGFGVSVAGIIPYRGVYFGLYDSLREKNPYKNDLGVLGVVSKFVVAQTTAIAAGYASYPFDTVRRRLQMQSEKPKEQWIYKGTADCFTKILKEEGMNAMFKGAGANALRTVGSALVLVLYDQMQGLLGVN 309
BLAST of mRNA_H-elongata_contig121695.1657.1 vs. uniprot
Match: D2W4U4_NAEGR (ADP/ATP translocase n=1 Tax=Naegleria gruberi TaxID=5762 RepID=D2W4U4_NAEGR) HSP 1 Score: 263 bits (672), Expect = 7.970e-86 Identity = 126/166 (75.90%), Postives = 147/166 (88.55%), Query Frame = 1
Query: 1 RTRLASDVGTGKRDFNGLWDCLSKTARGPKGFMGLYNGFGVSVMGIIPYRGVYFGLYDTFREKNPFKDDKGVKGVLSKFAIAQSVAIASGYASYPFDTVRRRLQMQSEKPPEEWLYKGTGDCFRKIVKDEGMAALFKGAGANALRTVGSALVLVMYDQMKTVFNLH 498
RTRLASDVG +R FNGL DCL+KTA+GP GFMGLYNGFGVSV GIIPYRGVYFGLYD+ REKNP+K D GV G++SKFA+AQ+ AIA+GYASYPFDTVRRRLQMQSEKP ++WLYKGT DCF KI+K+EG A+FKGAGANALRTVGSALVLV+YDQ++ + ++
Sbjct: 140 RTRLASDVGK-ERVFNGLADCLAKTAKGPAGFMGLYNGFGVSVAGIIPYRGVYFGLYDSLREKNPYKKDFGVMGIISKFAVAQTTAIAAGYASYPFDTVRRRLQMQSEKPKDQWLYKGTADCFTKILKEEGTQAMFKGAGANALRTVGSALVLVLYDQLQGMLGVN 304
BLAST of mRNA_H-elongata_contig121695.1657.1 vs. uniprot
Match: A0A835ZKK3_9STRA (ADP/ATP translocase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZKK3_9STRA) HSP 1 Score: 262 bits (670), Expect = 1.460e-85 Identity = 122/166 (73.49%), Postives = 141/166 (84.94%), Query Frame = 1
Query: 1 RTRLASDVGTGKRDFNGLWDCLSKTARGPKGFMGLYNGFGVSVMGIIPYRGVYFGLYDTFREKNPFKDDKGVKGVLSKFAIAQSVAIASGYASYPFDTVRRRLQMQSEKPPEEWLYKGTGDCFRKIVKDEGMAALFKGAGANALRTVGSALVLVMYDQMKTVFNLH 498
RTRLA+DVG+GKRDF GLWDCL +TA GP+G + LYNGFGVSV+GIIPYRGVYFGLYD+ REKNPF+DD G+ G+LSK+A AQ V I +GYASYPFDTVRRRLQMQSEKP +WLY GT DCFRKI DEG A +KGA AN +RTVG+ALVL +YDQMKT+ +LH
Sbjct: 144 RTRLAADVGSGKRDFEGLWDCLKRTASGPRGALALYNGFGVSVLGIIPYRGVYFGLYDSAREKNPFRDDPGLVGLLSKWAQAQVVTICAGYASYPFDTVRRRLQMQSEKPTSDWLYAGTRDCFRKIYHDEGFTAFYKGAWANVIRTVGAALVLTIYDQMKTIMHLH 309
BLAST of mRNA_H-elongata_contig121695.1657.1 vs. uniprot
Match: F2E4J1_HORVV (ADP/ATP translocase n=1 Tax=Hordeum vulgare subsp. vulgare TaxID=112509 RepID=F2E4J1_HORVV) HSP 1 Score: 260 bits (664), Expect = 1.430e-84 Identity = 124/166 (74.70%), Postives = 140/166 (84.34%), Query Frame = 1
Query: 1 RTRLASDVGTGKRDFNGLWDCLSKTARGPKGFMGLYNGFGVSVMGIIPYRGVYFGLYDTFREKNPFKDDKGVKGVLSKFAIAQSVAIASGYASYPFDTVRRRLQMQSEKPPEEWLYKGTGDCFRKIVKDEGMAALFKGAGANALRTVGSALVLVMYDQMKTVFNLH 498
RTRLASDVG G + FNGL DCL KTARGP G +GLYNGFGVSV GIIPYRGVYFG+YD NPFK++KG+ G+ SKFAIAQ+ AI +GYASYPFDT+RRRLQMQSEKP EEWLYKGT DCF KIVK+EG +ALFKGAGANALRTVGSALVLV+Y ++KT+
Sbjct: 143 RTRLASDVGKGHKSFNGLADCLIKTARGPSGILGLYNGFGVSVAGIIPYRGVYFGMYDXXXXXNPFKNEKGIIGLASKFAIAQATAITAGYASYPFDTIRRRLQMQSEKPKEEWLYKGTADCFNKIVKNEGTSALFKGAGANALRTVGSALVLVLYGEIKTMLGFE 308
BLAST of mRNA_H-elongata_contig121695.1657.1 vs. uniprot
Match: A0A6A5CF32_NAEFO (ADP/ATP translocase n=2 Tax=Naegleria TaxID=5761 RepID=A0A6A5CF32_NAEFO) HSP 1 Score: 258 bits (660), Expect = 5.440e-84 Identity = 121/160 (75.62%), Postives = 142/160 (88.75%), Query Frame = 1
Query: 1 RTRLASDVGTGKRDFNGLWDCLSKTARGPKGFMGLYNGFGVSVMGIIPYRGVYFGLYDTFREKNPFKDDKGVKGVLSKFAIAQSVAIASGYASYPFDTVRRRLQMQSEKPPEEWLYKGTGDCFRKIVKDEGMAALFKGAGANALRTVGSALVLVMYDQMK 480
RTRLASDVG RDF GLWDCL KTARGP GF+GLYNGFGVSV GIIPYRGVYFGLYDT REKNP++ D G+ GV++KFA+AQ+V+IA+GYASYPFDTVRRRL MQSEKP ++W+Y+GT DCF KI+++EG A+FKGAGANA+RTVGSALVLV+YDQ +
Sbjct: 147 RTRLASDVGN-HRDFKGLWDCLVKTARGPSGFLGLYNGFGVSVAGIIPYRGVYFGLYDTLREKNPYQSDPGIIGVITKFALAQAVSIAAGYASYPFDTVRRRLMMQSEKPKDQWIYRGTVDCFSKILREEGTKAMFKGAGANAVRTVGSALVLVLYDQFQ 305 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig121695.1657.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig121695.1657.1 >prot_H-elongata_contig121695.1657.1 ID=prot_H-elongata_contig121695.1657.1|Name=mRNA_H-elongata_contig121695.1657.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=167bp RTRLASDVGTGKRDFNGLWDCLSKTARGPKGFMGLYNGFGVSVMGIIPYRback to top mRNA from alignment at H-elongata_contig121695:974..1474+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig121695.1657.1 ID=mRNA_H-elongata_contig121695.1657.1|Name=mRNA_H-elongata_contig121695.1657.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=501bp|location=Sequence derived from alignment at H-elongata_contig121695:974..1474+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig121695:974..1474+ >mRNA_H-elongata_contig121695.1657.1 ID=mRNA_H-elongata_contig121695.1657.1|Name=mRNA_H-elongata_contig121695.1657.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1002bp|location=Sequence derived from alignment at H-elongata_contig121695:974..1474+ (Himanthalia elongata Himel1 dioecious)back to top |