prot_H-elongata_contig121326.1636.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig121326.1636.1
Unique Nameprot_H-elongata_contig121326.1636.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length50
Homology
[Close]
BLAST of mRNA_H-elongata_contig121326.1636.1 vs. uniprot
Match: D8LK78_ECTSI (Ubiquinol cytochrome c reductase subunit QCR7 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LK78_ECTSI)

HSP 1 Score: 86.7 bits (213), Expect = 7.940e-21
Identity = 43/50 (86.00%), Postives = 47/50 (94.00%), Query Frame = 0 
Query:    1 MIEENPDVAEAIRRLTPAQKLARRRRQLRAFDISLKKTPLPDHIQAVQQP 50
            MIEE+PDVAEA+RRLTP Q+LAR+RRQ RAFDISLKKTPLPDHIQAVQ P
Sbjct:   39 MIEEDPDVAEAVRRLTPEQQLARKRRQFRAFDISLKKTPLPDHIQAVQDP 88
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig121326.1636.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LK78_ECTSI7.940e-2186.00Ubiquinol cytochrome c reductase subunit QCR7 n=2 ... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036544Cytochrome b-c1 complex subunit 7 superfamilyGENE3D1.10.1090.10coord: 1..49
e-value: 9.0E-10
score: 40.4
IPR036544Cytochrome b-c1 complex subunit 7 superfamilySUPERFAMILY8152414 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)coord: 1..48
IPR003197Cytochrome b-c1 complex subunit 7PFAMPF02271UCR_14kDcoord: 1..48
e-value: 6.8E-10
score: 38.8

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig121326contigH-elongata_contig121326:1643..1792 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig121326.1636.1mRNA_H-elongata_contig121326.1636.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig121326 1622..1792 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig121326.1636.1 ID=prot_H-elongata_contig121326.1636.1|Name=mRNA_H-elongata_contig121326.1636.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=50bp
MIEENPDVAEAIRRLTPAQKLARRRRQLRAFDISLKKTPLPDHIQAVQQP
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036544QCR7_sf
IPR003197QCR7