prot_H-elongata_contig120151.1557.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig120151.1557.1
Unique Nameprot_H-elongata_contig120151.1557.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length178
Homology
BLAST of mRNA_H-elongata_contig120151.1557.1 vs. uniprot
Match: A0A6H5KJD8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJD8_9PHAE)

HSP 1 Score: 265 bits (678), Expect = 6.330e-81
Identity = 129/169 (76.33%), Postives = 142/169 (84.02%), Query Frame = 0
Query:   11 QIVSCAADGQVRLTSLSRGTSILMGKHEGRAHRLAIEPGSPHRFMTCGEDGVVLEFDLRSSSARK-GRTLLRQPGGRSITGMALNPADPNFLFVCGSSPFLDLYDARKISTPTARYCPWSLRSSRGHITGCNANWCGSEVVATYNPMGEVYRFDVKKNAV--VSSNSPW 176
            +IVSCAADGQVRLT+LSR TS L+G+HEGRAHRLAIEPGSPHRFMTCGEDGVVL FDLR+  AR  G TLLRQPGGRSI+GMALNPADPN LFVCG SP+LD++DARK+  P AR+CP S R SR HITG   NWCGSEVVATYNP GEVY FDVKK+A   + SNS W
Sbjct:  251 KIVSCAADGQVRLTNLSRSTSELLGEHEGRAHRLAIEPGSPHRFMTCGEDGVVLSFDLRAPVARNMGSTLLRQPGGRSISGMALNPADPNVLFVCGDSPYLDMFDARKVDVPAARFCPRSRRGSRAHITGVAVNWCGSEVVATYNPSGEVYLFDVKKHASRGMGSNSMW 419          
BLAST of mRNA_H-elongata_contig120151.1557.1 vs. uniprot
Match: D7FTN6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTN6_ECTSI)

HSP 1 Score: 259 bits (662), Expect = 8.530e-79
Identity = 124/159 (77.99%), Postives = 136/159 (85.53%), Query Frame = 0
Query:   11 QIVSCAADGQVRLTSLSRGTSILMGKHEGRAHRLAIEPGSPHRFMTCGEDGVVLEFDLRSSSARK-GRTLLRQPGGRSITGMALNPADPNFLFVCGSSPFLDLYDARKISTPTARYCPWSLRSSRGHITGCNANWCGSEVVATYNPMGEVYRFDVKKNA 168
            +IVSCAADGQVRLT+LSR TS L+G+HEGRAHRLAIEPGSPHRFMTCGEDGVVL FDLR+  AR  G TLLRQPGGRSI+GMALNPADPN LFVCG SP+LD++DARK   P AR+CP S R SR HITG   NWCG+EVVATYNP GEVY FDVKK+A
Sbjct:  253 KIVSCAADGQVRLTNLSRSTSELLGEHEGRAHRLAIEPGSPHRFMTCGEDGVVLSFDLRAPLARNMGATLLRQPGGRSISGMALNPADPNVLFVCGDSPYLDMFDARKADVPAARFCPRSRRGSRAHITGVAVNWCGTEVVATYNPSGEVYLFDVKKHA 411          
BLAST of mRNA_H-elongata_contig120151.1557.1 vs. uniprot
Match: UPI001C4ECB3C (DDB1- and CUL4-associated factor 8-like isoform X2 n=1 Tax=Macadamia integrifolia TaxID=60698 RepID=UPI001C4ECB3C)

HSP 1 Score: 112 bits (279), Expect = 7.270e-26
Identity = 69/169 (40.83%), Postives = 98/169 (57.99%), Query Frame = 0
Query:   12 IVSCAADGQVRLTSL---SRGTSILMGKHEGRAHRLAIEPGSPHRFMTCGEDGVVLEFDLRSSSARKGRTLL------RQPGGRSITGMALNPADPNFLFVCGSSPFLDLYDARK--------ISTPTARYCPWSLRSSRG-HITGCNANWCGSEVVATYNPMGEVYRF 162
            IV+CAADGQVR   +    +  ++++GKH+GRAH+LAIE GSPH F TCGEDG+V  FDLR+ +A +  T        R  G   +  +A++P +PNF  V GS  +  +YD RK           P   +CP  L S+R   ITG + ++  SE++ +YN  G +Y F
Sbjct:  116 IVTCAADGQVRHAKIPEHGKVETVMLGKHQGRAHKLAIERGSPHIFYTCGEDGLVQHFDLRTGTATELFTCKSFHDKSRLDGIVHLNTIAMDPRNPNFFAVGGSDEYARIYDIRKYKWDGSTDFGQPADSFCPTHLISNREVGITGLSFSY-QSELLVSYND-GHIYLF 282          
BLAST of mRNA_H-elongata_contig120151.1557.1 vs. uniprot
Match: A0A0Q3FER2_BRADI (Uncharacterized protein n=3 Tax=Brachypodium distachyon TaxID=15368 RepID=A0A0Q3FER2_BRADI)

HSP 1 Score: 112 bits (279), Expect = 1.170e-25
Identity = 63/153 (41.18%), Postives = 90/153 (58.82%), Query Frame = 0
Query:   12 IVSCAADGQVRLTSLSRGTSI---LMGKHEGRAHRLAIEPGSPHRFMTCGEDGVVLEFDLRSSSARK---GRTLLRQPGGRS---ITGMALNPADPNFLFVCGSSPFLDLYDARKISTPTARYCPWSLRSSRGHITGCNANWCGSEVVATYNP 155
            IV+CAADG+VR+  +  G  +   L+G+H+GRAH+LAIEPGSP+ F +CGEDG+V  FDLR+ +A K    R    +PG  S   +  +A++P +PN L V GS+ F  +YD RK          W   S  GH + C   +C   ++ T +P
Sbjct:  123 IVTCAADGEVRIAKIQDGGDVPTSLLGEHDGRAHKLAIEPGSPYIFYSCGEDGLVQHFDLRTDTATKLFICRNSFTKPGYSSHIHLNAIAMDPRNPNLLGVGGSNSFARVYDIRKYK--------WDGSSDFGHPSDC---YCPPHLINTRSP 264          
BLAST of mRNA_H-elongata_contig120151.1557.1 vs. uniprot
Match: A0A1R3HLK5_COCAP (Uncharacterized protein n=2 Tax=Corchorus TaxID=93758 RepID=A0A1R3HLK5_COCAP)

HSP 1 Score: 111 bits (278), Expect = 1.200e-25
Identity = 68/162 (41.98%), Postives = 92/162 (56.79%), Query Frame = 0
Query:   11 QIVSCAADGQVRLTSLSRGTSIL---MGKHEGRAHRLAIEPGSPHRFMTCGEDGVVLEFDLRSSSARKGRTLL------RQPGGRSITGMALNPADPNFLFVCGSSPFLDLYDARKIS--------TPTARYCPWSL-RSSRGHITGCNANWCGSEVVATYN 154
            +IV+ +ADGQVRL  +     +    +GKHEGR H LA+EPGSPH F +CGEDG+V  FDLRSSSA K    L      RQP   S+  + ++P +PN+  + GS  +  +YD R+          TP   +CP  L  S+  HITG  A    SE++ +YN
Sbjct:   92 RIVTSSADGQVRLGDIFENGLVRTRRLGKHEGRVHDLAVEPGSPHIFYSCGEDGLVQHFDLRSSSATKLFHCLSIKETKRQPSEISLNAIVIDPRNPNYFAIGGSDEYARVYDIRRCQLDASNNSDTPVNVFCPHHLVDSNHVHITGL-AYSSTSELLVSYN 252          
BLAST of mRNA_H-elongata_contig120151.1557.1 vs. uniprot
Match: UPI001CC80423 (DDB1- and CUL4-associated factor 8-like isoform X2 n=1 Tax=Telopea speciosissima TaxID=54955 RepID=UPI001CC80423)

HSP 1 Score: 111 bits (278), Expect = 1.630e-25
Identity = 74/184 (40.22%), Postives = 102/184 (55.43%), Query Frame = 0
Query:   12 IVSCAADGQVRLTSL---SRGTSILMGKHEGRAHRLAIEPGSPHRFMTCGEDGVVLEFDLRSSSARK--GRTLLRQPGGRSITGM---ALNPADPNFLFVCGSSPFLDLYDARK--------ISTPTARYCPWSLRSSR-GHITGCNANWCGSEVVATYNPMGEVYRFD----VKKNAVVSSNS 174
            IVSCAADGQVR T +    +  ++++GKH+GRAH+LAIEPGSPH F TCGEDG V  FDLR+  A +             SI  +   A++P +PNF  V G+  +  LYD RK        I  P   +CP  + S R   ITG + ++  SE++ +YN    +Y F     +  N + SS+S
Sbjct:  116 IVSCAADGQVRHTKILENGKVETVMLGKHQGRAHKLAIEPGSPHIFYTCGEDGFVQHFDLRTGFATELFACKSFHDKSRYSIVHLNTIAIDPRNPNFFAVGGTDEYARLYDIRKYKWDGSTDIGQPADSFCPSHMISDREAVITGLSFSY-QSELLVSYNDE-HIYLFTRDMGLGSNPIASSSS 297          
BLAST of mRNA_H-elongata_contig120151.1557.1 vs. uniprot
Match: UPI001CC5551F (DDB1- and CUL4-associated factor 8-like isoform X1 n=3 Tax=Telopea speciosissima TaxID=54955 RepID=UPI001CC5551F)

HSP 1 Score: 111 bits (278), Expect = 1.650e-25
Identity = 74/184 (40.22%), Postives = 102/184 (55.43%), Query Frame = 0
Query:   12 IVSCAADGQVRLTSL---SRGTSILMGKHEGRAHRLAIEPGSPHRFMTCGEDGVVLEFDLRSSSARK--GRTLLRQPGGRSITGM---ALNPADPNFLFVCGSSPFLDLYDARK--------ISTPTARYCPWSLRSSR-GHITGCNANWCGSEVVATYNPMGEVYRFD----VKKNAVVSSNS 174
            IVSCAADGQVR T +    +  ++++GKH+GRAH+LAIEPGSPH F TCGEDG V  FDLR+  A +             SI  +   A++P +PNF  V G+  +  LYD RK        I  P   +CP  + S R   ITG + ++  SE++ +YN    +Y F     +  N + SS+S
Sbjct:  116 IVSCAADGQVRHTKILENGKVETVMLGKHQGRAHKLAIEPGSPHIFYTCGEDGFVQHFDLRTGFATELFACKSFHDKSRYSIVHLNTIAIDPRNPNFFAVGGTDEYARLYDIRKYKWDGSTDIGQPADSFCPSHMISDREAVITGLSFSY-QSELLVSYNDE-HIYLFTRDMGLGSNPIASSSS 297          
BLAST of mRNA_H-elongata_contig120151.1557.1 vs. uniprot
Match: UPI001CC514EE (DDB1- and CUL4-associated factor 8-like n=2 Tax=Proteaceae TaxID=4328 RepID=UPI001CC514EE)

HSP 1 Score: 110 bits (276), Expect = 3.230e-25
Identity = 68/161 (42.24%), Postives = 96/161 (59.63%), Query Frame = 0
Query:   12 IVSCAADGQVRLTS-LSRGT--SILMGKHEGRAHRLAIEPGSPHRFMTCGEDGVVLEFDLRSSSA------RKGRTLLRQPGGRSITGMALNPADPNFLFVCGSSPFLDLYDARK--------ISTPTARYCPWSLRSSRG-HITGCNANWCGSEVVATYN 154
            IV+CAADGQVR    L RG   ++++GKH+GRAH+LAIEPGSP+ F TCGEDG+V  FDLR+ +A      +  R   R     ++  +A++P +PNF  V GS  +  +YD RK           P   +CP  L S+R   ITG + ++  SE++ +YN
Sbjct:  116 IVTCAADGQVRHAKILERGKVETVILGKHQGRAHKLAIEPGSPYIFYTCGEDGLVQHFDLRTGNATELFTCKSSREKSRFDRIVNLNTIAVDPRNPNFFAVGGSDEYARIYDIRKYKWDGSTDFGQPADSFCPAHLISNRQVGITGLSFSY-QSELLVSYN 275          
BLAST of mRNA_H-elongata_contig120151.1557.1 vs. uniprot
Match: UPI000CD9B7BB (DDB1- and CUL4-associated factor 8 isoform X2 n=1 Tax=Lactuca sativa TaxID=4236 RepID=UPI000CD9B7BB)

HSP 1 Score: 110 bits (274), Expect = 5.300e-25
Identity = 63/136 (46.32%), Postives = 77/136 (56.62%), Query Frame = 0
Query:   12 IVSCAADGQVRLTSLSRGTSI---LMGKHEGRAHRLAIEPGSPHRFMTCGEDGVVLEFDLRSSSARKGRTLLRQPGGRSITGM------ALNPADPNFLFVCGSSPFLDLYDARK--------ISTPTARYCPWSL 130
            IV+CAADGQVR   +     I   L+GKH+GRAH+LA EPGSPH F TCGEDG+V  FDLRS  A +  T    P  RS  G+      A++P +PN   + GS  +  LYD RK           PT  +CPW L
Sbjct:  121 IVTCAADGQVRHAMIPEHGEIEPKLLGKHQGRAHKLANEPGSPHIFYTCGEDGLVQHFDLRSGDATELFTCQPIPD-RSFVGVVNLNTIAIDPRNPNLFAIAGSDEYTRLYDIRKYKWDGSTPFGKPTDYFCPWPL 255          
BLAST of mRNA_H-elongata_contig120151.1557.1 vs. uniprot
Match: A0A218XFI2_PUNGR (DDB1- and CUL4-associated factor 8 n=1 Tax=Punica granatum TaxID=22663 RepID=A0A218XFI2_PUNGR)

HSP 1 Score: 109 bits (272), Expect = 1.100e-24
Identity = 66/160 (41.25%), Postives = 88/160 (55.00%), Query Frame = 0
Query:   12 IVSCAADGQVRLTSLSRGTSI---LMGKHEGRAHRLAIEPGSPHRFMTCGEDGVVLEFDLRSSSARKGRTLLRQPGGRS------ITGMALNPADPNFLFVCGSSPFLDLYDARKIST--------PTARYCPWSLRSSRGHITGCNANWCGSEVVATYN 154
            IV+CAADGQVR   +     +   L+ KH+G AH+LAIEPGSPH F +CGEDG+V  FDLR+ +A +  T  +    R       +  +A++P DPN   V GS  +  LYD RK  +        P   +CP  L   R  ITG  A    SE++A+YN
Sbjct:  108 IVTCAADGQVRYAQILESGGVKTTLLAKHQGGAHKLAIEPGSPHVFYSCGEDGLVQHFDLRTKTATELFTCRQIHAKRGYLPIIQLNAIAIDPRDPNLFTVAGSDEYARLYDIRKYQSDRASDFGQPVDYFCPPHLIGDRVGITGL-AYSDHSELLASYN 266          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig120151.1557.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KJD8_9PHAE6.330e-8176.33Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FTN6_ECTSI8.530e-7977.99Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
UPI001C4ECB3C7.270e-2640.83DDB1- and CUL4-associated factor 8-like isoform X2... [more]
A0A0Q3FER2_BRADI1.170e-2541.18Uncharacterized protein n=3 Tax=Brachypodium dista... [more]
A0A1R3HLK5_COCAP1.200e-2541.98Uncharacterized protein n=2 Tax=Corchorus TaxID=93... [more]
UPI001CC804231.630e-2540.22DDB1- and CUL4-associated factor 8-like isoform X2... [more]
UPI001CC5551F1.650e-2540.22DDB1- and CUL4-associated factor 8-like isoform X1... [more]
UPI001CC514EE3.230e-2542.24DDB1- and CUL4-associated factor 8-like n=2 Tax=Pr... [more]
UPI000CD9B7BB5.300e-2546.32DDB1- and CUL4-associated factor 8 isoform X2 n=1 ... [more]
A0A218XFI2_PUNGR1.100e-2441.25DDB1- and CUL4-associated factor 8 n=1 Tax=Punica ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 5..175
e-value: 2.0E-16
score: 62.0
NoneNo IPR availablePANTHERPTHR15574WD REPEAT DOMAIN-CONTAINING FAMILYcoord: 10..166
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..17
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 5..13
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 18..177
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 14..17
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..4
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 11..170

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig120151contigH-elongata_contig120151:485..1964 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig120151.1557.1mRNA_H-elongata_contig120151.1557.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig120151 485..1964 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig120151.1557.1 ID=prot_H-elongata_contig120151.1557.1|Name=mRNA_H-elongata_contig120151.1557.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=178bp
MNSYVFVCAAQIVSCAADGQVRLTSLSRGTSILMGKHEGRAHRLAIEPGS
PHRFMTCGEDGVVLEFDLRSSSARKGRTLLRQPGGRSITGMALNPADPNF
LFVCGSSPFLDLYDARKISTPTARYCPWSLRSSRGHITGCNANWCGSEVV
ATYNPMGEVYRFDVKKNAVVSSNSPWK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR036322WD40_repeat_dom_sf