prot_H-elongata_contig120007.1546.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig120007.1546.1
Unique Nameprot_H-elongata_contig120007.1546.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length66
Homology
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BLAST of mRNA_H-elongata_contig120007.1546.1 vs. uniprot
Match: A0A6H5JCZ4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCZ4_9PHAE)

HSP 1 Score: 111 bits (277), Expect = 5.600e-27
Identity = 53/65 (81.54%), Postives = 58/65 (89.23%), Query Frame = 0 
Query:    2 VHEISETVSLLSPLKRLDASWGYEHVPYPYACYNDANKMFQADIYKTLEELVPLQVNVQAVARRE 66
            VH+ISETVSLL+PLK L+ASWGYE VPYPYAC ND  K FQAD+YKTLE+LVPLQVNVQAVA RE
Sbjct:   89 VHQISETVSLLAPLKLLEASWGYEQVPYPYACSNDDAKEFQADVYKTLEDLVPLQVNVQAVANRE 153
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BLAST of mRNA_H-elongata_contig120007.1546.1 vs. uniprot
Match: D7FW21_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FW21_ECTSI)

HSP 1 Score: 109 bits (272), Expect = 2.780e-26
Identity = 52/65 (80.00%), Postives = 58/65 (89.23%), Query Frame = 0 
Query:    2 VHEISETVSLLSPLKRLDASWGYEHVPYPYACYNDANKMFQADIYKTLEELVPLQVNVQAVARRE 66
            VH+ISETVSLL+PLK L+ASWGYE VPYPYAC ND  K FQA++YKTLE+LVPLQVNVQAVA RE
Sbjct:  510 VHQISETVSLLAPLKLLEASWGYEQVPYPYACSNDDAKEFQANVYKTLEDLVPLQVNVQAVANRE 574
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig120007.1546.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JCZ4_9PHAE5.600e-2781.54Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FW21_ECTSI2.780e-2680.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig120007contigH-elongata_contig120007:579..1844 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig120007.1546.1mRNA_H-elongata_contig120007.1546.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig120007 579..1874 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig120007.1546.1 ID=prot_H-elongata_contig120007.1546.1|Name=mRNA_H-elongata_contig120007.1546.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=66bp
MVHEISETVSLLSPLKRLDASWGYEHVPYPYACYNDANKMFQADIYKTLE
ELVPLQVNVQAVARRE
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