prot_H-elongata_contig118307.1414.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig118307.1414.1
Unique Nameprot_H-elongata_contig118307.1414.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length75
Homology
BLAST of mRNA_H-elongata_contig118307.1414.1 vs. uniprot
Match: D7G1H8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1H8_ECTSI)

HSP 1 Score: 110 bits (276), Expect = 1.180e-26
Identity = 50/72 (69.44%), Postives = 59/72 (81.94%), Query Frame = 0
Query:    2 QVCTKSGAAFGLTQSRYNCSSCGEAFALEYCSQKVPLPHHGFEEAVRVCDDCLAAQQLLAHLRYI----DSH 69
            +VC KSG AFG+TQSR+ CSSCG  F +E+C+Q+VPLPHHGFE+AVRVCDDCL AQQ L HLRYI    D+H
Sbjct:  140 EVCMKSGVAFGMTQSRHYCSSCGRVFVVEHCNQRVPLPHHGFEQAVRVCDDCLEAQQHLTHLRYICCTLDAH 211          
BLAST of mRNA_H-elongata_contig118307.1414.1 vs. uniprot
Match: A0A6H5KWD1_9PHAE (PI3K/PI4K catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWD1_9PHAE)

HSP 1 Score: 71.6 bits (174), Expect = 7.460e-13
Identity = 30/43 (69.77%), Postives = 36/43 (83.72%), Query Frame = 0
Query:    3 VCTKSGAAFGLTQSRYNCSSCGEAFALEYCSQKVPLPHHGFEE 45
            VC KSG AFG+TQSR+ CSSCG  F LE+C+Q+VPLP HGFE+
Sbjct:  185 VCMKSGVAFGMTQSRHYCSSCGRVFVLEHCNQRVPLPQHGFEQ 227          
BLAST of mRNA_H-elongata_contig118307.1414.1 vs. uniprot
Match: A0A835YUK5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUK5_9STRA)

HSP 1 Score: 65.5 bits (158), Expect = 1.100e-10
Identity = 37/83 (44.58%), Postives = 42/83 (50.60%), Query Frame = 0
Query:    4 CTKSGA-----AFGLTQSRYNCSSCGEAFALEYCSQKVPLPHHGFEEAVRVCDDCL-------------AAQQLLAHLRYIDS 68
            C KSG      AFGLTQSRYNC SCG AF  E+C  + PL HHG E   R                    AQQLL HL+Y++ 
Sbjct:  304 CAKSGVGLDNLAFGLTQSRYNCVSCGRAFTFEHCHLECPLVHHGLEGRARXXXXXXXXXXXXXXXXXXXGAQQLLQHLQYLNG 386          
BLAST of mRNA_H-elongata_contig118307.1414.1 vs. uniprot
Match: UPI001884B189 (lateral signaling target protein 2 homolog n=1 Tax=Pollicipes pollicipes TaxID=41117 RepID=UPI001884B189)

HSP 1 Score: 52.4 bits (124), Expect = 4.460e-6
Identity = 23/54 (42.59%), Postives = 32/54 (59.26%), Query Frame = 0
Query:    4 CTKSGAAFGLTQSRYNCSSCGEAFALEYCSQKVPLPHHGFEEAVRVCDDCLAAQ 57
            C + G AF + + R++C  CG  F        +PLP +G   AVRVCD+CLAA+
Sbjct:  700 CMQCGQAFTVMRRRHHCRRCGRVFCSRCSGGVLPLPQYGHVSAVRVCDECLAAE 753          
BLAST of mRNA_H-elongata_contig118307.1414.1 vs. uniprot
Match: A0A0L0D7N0_THETB (FYVE-type domain-containing protein n=1 Tax=Thecamonas trahens ATCC 50062 TaxID=461836 RepID=A0A0L0D7N0_THETB)

HSP 1 Score: 51.6 bits (122), Expect = 8.320e-6
Identity = 21/58 (36.21%), Postives = 34/58 (58.62%), Query Frame = 0
Query:    4 CTKSGAAFGLTQSRYNCSSCGEAFALEYCSQKVPLPHHGFEEAVRVCDDCLAAQQLLA 61
            C K G  F L + +++C  CG  F     ++++PLPH G+ E VR+C DC+    L++
Sbjct:   41 CFKCGLLFSLFRWKHHCRQCGAVFCNSCSNKRIPLPHLGYHEPVRICLDCIQLAYLVS 98          
BLAST of mRNA_H-elongata_contig118307.1414.1 vs. uniprot
Match: UPI0003F0D40B (vacuolar protein 8-like n=1 Tax=Saccoglossus kowalevskii TaxID=10224 RepID=UPI0003F0D40B)

HSP 1 Score: 50.4 bits (119), Expect = 2.090e-5
Identity = 20/54 (37.04%), Postives = 32/54 (59.26%), Query Frame = 0
Query:   11 FGLTQSRYNCSSCGEAFALEYCSQKVPLPHHGFEEAVRVCDDCLAAQQLLAHLR 64
            F   + +++C  CG     + C +KVPLPH G+ +  RVC++CL   QL++  R
Sbjct:   55 FNQFRRKHHCRVCGRVTCNKCCKEKVPLPHLGYPDPERVCEECLTVTQLISKSR 108          
BLAST of mRNA_H-elongata_contig118307.1414.1 vs. uniprot
Match: A0A4D9CSH4_9STRA (FYVE-type domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CSH4_9STRA)

HSP 1 Score: 49.7 bits (117), Expect = 3.610e-5
Identity = 20/44 (45.45%), Postives = 28/44 (63.64%), Query Frame = 0
Query:   10 AFGLTQSRYNCSSCGEAFALEYCSQKVPLPHHGFEEAVRVCDDC 53
            AFGL   R++C +CG +    +  ++VPLPH G+   VRVCD C
Sbjct:  107 AFGLLTRRHHCRNCGRSVCSRHAEKRVPLPHWGYLNYVRVCDRC 150          
BLAST of mRNA_H-elongata_contig118307.1414.1 vs. uniprot
Match: W7TLS0_9STRA (Zinc finger FYVE-type protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TLS0_9STRA)

HSP 1 Score: 49.7 bits (117), Expect = 3.820e-5
Identity = 20/44 (45.45%), Postives = 28/44 (63.64%), Query Frame = 0
Query:   10 AFGLTQSRYNCSSCGEAFALEYCSQKVPLPHHGFEEAVRVCDDC 53
            AFGL   R++C +CG +    +  ++VPLPH G+   VRVCD C
Sbjct:  107 AFGLLTRRHHCRNCGRSLCSRHSEKRVPLPHWGYLNYVRVCDRC 150          
BLAST of mRNA_H-elongata_contig118307.1414.1 vs. uniprot
Match: A0A7S1KDW5_9ALVE (Hypothetical protein n=1 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A7S1KDW5_9ALVE)

HSP 1 Score: 48.9 bits (115), Expect = 7.250e-5
Identity = 20/53 (37.74%), Postives = 32/53 (60.38%), Query Frame = 0
Query:    1 VQVCTKSGAAFGLTQSRYNCSSCGEAFALEYCSQKVPLPHHGFEEAVRVCDDC 53
            V  C +  A F L + +++C +CG+ F  +  S ++ LP  G+ + VRVCDDC
Sbjct:   85 VTACMQCNATFNLGKWKHHCRACGKVFCADCSSTRLRLPDMGYNDKVRVCDDC 137          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig118307.1414.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 9
Match NameE-valueIdentityDescription
D7G1H8_ECTSI1.180e-2669.44Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KWD1_9PHAE7.460e-1369.77PI3K/PI4K catalytic domain-containing protein n=1 ... [more]
A0A835YUK5_9STRA1.100e-1044.58Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
UPI001884B1894.460e-642.59lateral signaling target protein 2 homolog n=1 Tax... [more]
A0A0L0D7N0_THETB8.320e-636.21FYVE-type domain-containing protein n=1 Tax=Thecam... [more]
UPI0003F0D40B2.090e-537.04vacuolar protein 8-like n=1 Tax=Saccoglossus kowal... [more]
A0A4D9CSH4_9STRA3.610e-545.45FYVE-type domain-containing protein n=1 Tax=Nannoc... [more]
W7TLS0_9STRA3.820e-545.45Zinc finger FYVE-type protein n=1 Tax=Nannochlorop... [more]
A0A7S1KDW5_9ALVE7.250e-537.74Hypothetical protein n=1 Tax=Vitrella brassicaform... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 1..58
e-value: 1.6E-13
score: 52.3
IPR000306FYVE zinc fingerPFAMPF01363FYVEcoord: 2..56
e-value: 3.0E-9
score: 36.9
NoneNo IPR availablePANTHERPTHR47794FAMILY NOT NAMEDcoord: 3..58
IPR017455Zinc finger, FYVE-relatedPROSITEPS50178ZF_FYVEcoord: 1..58
score: 8.71
IPR011011Zinc finger, FYVE/PHD-typeSUPERFAMILY57903FYVE/PHD zinc fingercoord: 2..56

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig118307contigH-elongata_contig118307:116..340 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig118307.1414.1mRNA_H-elongata_contig118307.1414.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig118307 116..340 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig118307.1414.1 ID=prot_H-elongata_contig118307.1414.1|Name=mRNA_H-elongata_contig118307.1414.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=75bp
VQVCTKSGAAFGLTQSRYNCSSCGEAFALEYCSQKVPLPHHGFEEAVRVC
DDCLAAQQLLAHLRYIDSHNIYLV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013083Znf_RING/FYVE/PHD
IPR000306Znf_FYVE
IPR017455Znf_FYVE-rel
IPR011011Znf_FYVE_PHD