prot_H-elongata_contig118196.1404.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig118196.1404.1
Unique Nameprot_H-elongata_contig118196.1404.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length175
Homology
BLAST of mRNA_H-elongata_contig118196.1404.1 vs. uniprot
Match: A0A6H5K7K2_9PHAE (NTP_transf_2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7K2_9PHAE)

HSP 1 Score: 150 bits (379), Expect = 7.680e-39
Identity = 87/179 (48.60%), Postives = 107/179 (59.78%), Query Frame = 0
Query:   16 FVVDGIDVSFRIPKAGKAIAQPLPPRMPTGGEH---------GRAVRQRTSDSD----------DVTTGAA-GAEAGKKGIGDTQEKCPDRLCVEDAGVVDLLSGYFRYFAKEFRHITQVMTLRPKNILNKRKVWTRKKLWRTSIEDPFETFDSINPHDLGTVISRSGQALLNQEWMRG 174
            F+V+GIDVSF      K  ++ LPP    G  H         GRA+    S++D          DV    A G+ +G +G           L + DA + DLL GYFRY A++F H  +VMTLRPK ILNK  VW R KLWRTS+EDPFETFDSINPHDLGTV+SR+GQ LL+Q+W RG
Sbjct:  691 FIVEGIDVSF-----SKINSEALPPCPLPGENHSPPLPRDTAGRAIHGNASEADSNQAVADSYPDVANDTANGSRSGSEG-----------LAIRDATICDLLLGYFRYLAEDFCHAKEVMTLRPKTILNKADVWARPKLWRTSVEDPFETFDSINPHDLGTVLSRTGQTLLHQQWKRG 853          
BLAST of mRNA_H-elongata_contig118196.1404.1 vs. uniprot
Match: D7G160_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G160_ECTSI)

HSP 1 Score: 140 bits (354), Expect = 1.710e-35
Identity = 84/180 (46.67%), Postives = 102/180 (56.67%), Query Frame = 0
Query:   16 FVVDGIDVSFRIPKAGKAIAQPLP-----PRMPTGGEHGRAVRQRTSDSDDVTTGAAGAEAGKKGIGDTQEKCPDR----------LCVEDAGVVDLLSGYFRYFAKEFRHIT------QVMTLRPKNILNKRKVWTRKKLWRTSIEDPFETFDSINPHDLGTVISRSGQALLNQEWMRG 174
            F+V+GIDVSF     G     PLP     P +P      RA+    S++D             +G+ D+ +   D           L V DA + DLL GYFR+ A++F H        QVMTLRPK ILNK  VW R KLWRTS+EDPFETFDS NPHDLGTV+SR+GQ LL+QEW RG
Sbjct:  683 FIVEGIDVSFSNTNPGTLPPCPLPVENHCPPLPRDTAD-RAIHGNASEADS-----------NQGVADSYDTANDTTNGSRSGSEGLAVRDATICDLLLGYFRHLAEDFCHAKEQQRQQQVMTLRPKTILNKADVWARPKLWRTSVEDPFETFDSTNPHDLGTVLSRTGQTLLHQEWKRG 850          
BLAST of mRNA_H-elongata_contig118196.1404.1 vs. uniprot
Match: D7G5D0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5D0_ECTSI)

HSP 1 Score: 68.2 bits (165), Expect = 3.650e-10
Identity = 40/106 (37.74%), Postives = 57/106 (53.77%), Query Frame = 0
Query:   78 DTQEKCPDRLCVEDAGVVDLLSGYFRYFA--------KEFRHITQVMTLRPKNILNKRKVWTRKKL-WRTSIEDPFETFDSINPHDLGTVISRSGQALLNQEWMRG 174
            ++  +C   L   D  +VD++ GYFRY+A        + F H +QV +LRP  +L K  VW  +   WRTS+ED F+T+D     DLG  +    Q+ L  EW RG
Sbjct:  650 ESSTRCRQVLGWSDLLIVDIILGYFRYYAHKRRGYVGRTFNHHSQVASLRPAMVLPKA-VWKGQTPGWRTSVEDAFKTYDGRCALDLGNELDIDSQSRLQNEWNRG 754          
BLAST of mRNA_H-elongata_contig118196.1404.1 vs. uniprot
Match: A0A7S2WW42_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WW42_9STRA)

HSP 1 Score: 62.8 bits (151), Expect = 2.650e-8
Identity = 28/53 (52.83%), Postives = 36/53 (67.92%), Query Frame = 0
Query:  121 KNILNKRKVWTRKKLWRTSIEDPFETFDSINPHDLGTVISRSGQALLNQEWMR 173
            K + NK ++W+  KLWR S+EDPFE  DSI PHDLG V+S+ GQ  L    +R
Sbjct:  384 KLLRNKHEIWSSTKLWRLSVEDPFEHHDSILPHDLGQVVSQEGQTRLKNVVLR 436          
BLAST of mRNA_H-elongata_contig118196.1404.1 vs. uniprot
Match: A0A7S4QEU5_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4QEU5_9STRA)

HSP 1 Score: 55.8 bits (133), Expect = 6.610e-6
Identity = 27/74 (36.49%), Postives = 43/74 (58.11%), Query Frame = 0
Query:   94 VVDLLSGYFRYFAKEFRHITQVMTLRPKNILNKRKVWTRKKLWRTSIEDPFETFDSINPHDLGTVISRSGQALL 167
            V  LL G+F ++A +F      +++R       + V+ R ++WR SIEDPFE  +S  PHDLG  ++  GQ ++
Sbjct:  769 VTVLLCGFFHFYAHDFPQSMVSVSIRLGRCALLKTVFVRSRMWRLSIEDPFEIHNSHCPHDLGMHLNERGQEVI 842          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig118196.1404.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A6H5K7K2_9PHAE7.680e-3948.60NTP_transf_2 domain-containing protein n=1 Tax=Ect... [more]
D7G160_ECTSI1.710e-3546.67Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G5D0_ECTSI3.650e-1037.74Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S2WW42_9STRA2.650e-852.83Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
A0A7S4QEU5_9STRA6.610e-636.49Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.1410.10coord: 73..174
e-value: 3.5E-11
score: 45.0
NoneNo IPR availableSUPERFAMILY81631PAP/OAS1 substrate-binding domaincoord: 91..147
IPR002058PAP/25A-associatedPFAMPF03828PAP_assoccoord: 94..146
e-value: 1.4E-6
score: 28.4

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig118196contigH-elongata_contig118196:48..1416 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig118196.1404.1mRNA_H-elongata_contig118196.1404.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig118196 48..1431 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig118196.1404.1 ID=prot_H-elongata_contig118196.1404.1|Name=mRNA_H-elongata_contig118196.1404.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=175bp
MTSEADASNPPNPPPFVVDGIDVSFRIPKAGKAIAQPLPPRMPTGGEHGR
AVRQRTSDSDDVTTGAAGAEAGKKGIGDTQEKCPDRLCVEDAGVVDLLSG
YFRYFAKEFRHITQVMTLRPKNILNKRKVWTRKKLWRTSIEDPFETFDSI
NPHDLGTVISRSGQALLNQEWMRG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002058PAP_assoc