prot_H-elongata_contig117440.1364.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig117440.1364.1
Unique Nameprot_H-elongata_contig117440.1364.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length50
Homology
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BLAST of mRNA_H-elongata_contig117440.1364.1 vs. uniprot
Match: D7FWZ9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWZ9_ECTSI)

HSP 1 Score: 76.3 bits (186), Expect = 1.830e-15
Identity = 36/49 (73.47%), Postives = 43/49 (87.76%), Query Frame = 0 
Query:    1 MLRSGARPVAVSPTPQGLELVWETLTEDLTAVKAGKLLITVSEQPPGLR 49
            MLRSGARPVAV+PT  GLELVWETLT+DL AV+AGKL + V+E+P G+R
Sbjct:  144 MLRSGARPVAVAPTESGLELVWETLTDDLKAVQAGKLSLVVTEEPAGIR 192
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BLAST of mRNA_H-elongata_contig117440.1364.1 vs. uniprot
Match: A0A6H5JFR6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFR6_9PHAE)

HSP 1 Score: 75.9 bits (185), Expect = 8.100e-15
Identity = 36/49 (73.47%), Postives = 43/49 (87.76%), Query Frame = 0 
Query:    1 MLRSGARPVAVSPTPQGLELVWETLTEDLTAVKAGKLLITVSEQPPGLR 49
            MLRSGARPVAV+PT  GLELVWETLT+DL AV+AGKL + V+E+P G+R
Sbjct:  342 MLRSGARPVAVAPTETGLELVWETLTDDLKAVQAGKLSLVVNEEPAGIR 390
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig117440.1364.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FWZ9_ECTSI1.830e-1573.47Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JFR6_9PHAE8.100e-1573.47Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig117440contigH-elongata_contig117440:1697..1846 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig117440.1364.1mRNA_H-elongata_contig117440.1364.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig117440 1697..1870 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig117440.1364.1 ID=prot_H-elongata_contig117440.1364.1|Name=mRNA_H-elongata_contig117440.1364.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=50bp
MLRSGARPVAVSPTPQGLELVWETLTEDLTAVKAGKLLITVSEQPPGLR*
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