prot_H-elongata_contig115638.1236.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig115638.1236.1
Unique Nameprot_H-elongata_contig115638.1236.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length95
Homology
BLAST of mRNA_H-elongata_contig115638.1236.1 vs. uniprot
Match: A0A6H5KUA0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUA0_9PHAE)

HSP 1 Score: 107 bits (268), Expect = 5.750e-29
Identity = 49/65 (75.38%), Postives = 55/65 (84.62%), Query Frame = 0
Query:   30 HVPPGKRPFIRHLTLQLDNCVSENKNHIVIGYLGSLVAPGFIGTVSVQFMPVGQTHMKLDQAFSR 94
            +VP GKRP+I   T+Q+DNCVSENKNHIVIGYLGSLVA G IG V VQFMPVG TH+K+DQ FSR
Sbjct:    2 YVPVGKRPYIYRFTIQVDNCVSENKNHIVIGYLGSLVAQGIIGEVEVQFMPVGHTHIKIDQVFSR 66          
BLAST of mRNA_H-elongata_contig115638.1236.1 vs. uniprot
Match: A0A6H5KN27_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KN27_9PHAE)

HSP 1 Score: 98.2 bits (243), Expect = 3.780e-23
Identity = 47/86 (54.65%), Postives = 61/86 (70.93%), Query Frame = 0
Query:    9 ITGCHLVCTALHKGLQRLFEEHVPPGKRPFIRHLTLQLDNCVSENKNHIVIGYLGSLVAPGFIGTVSVQFMPVGQTHMKLDQAFSR 94
            + G +LVCTAL   L+RL      PG+R +I+ L LQLDNCV ENKN+IV+ ++G LVA G IG+  V F+ VG TH+K+DQ FSR
Sbjct:    8 LPGSNLVCTALWLALKRLSAMWTKPGQRFYIKRLHLQLDNCVGENKNNIVLAFIGGLVAAGVIGSAEVCFLIVGHTHIKIDQVFSR 93          
BLAST of mRNA_H-elongata_contig115638.1236.1 vs. uniprot
Match: A0A6H5KAY2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAY2_9PHAE)

HSP 1 Score: 98.2 bits (243), Expect = 5.180e-22
Identity = 47/86 (54.65%), Postives = 61/86 (70.93%), Query Frame = 0
Query:    9 ITGCHLVCTALHKGLQRLFEEHVPPGKRPFIRHLTLQLDNCVSENKNHIVIGYLGSLVAPGFIGTVSVQFMPVGQTHMKLDQAFSR 94
            + G +LVCTAL   L+RL      PG+R +I+ L LQLDNCV ENKN+IV+ ++G LVA G IG+  V F+ VG TH+K+DQ FSR
Sbjct:    8 LPGSNLVCTALWLALKRLSAMWTKPGQRFYIKRLHLQLDNCVGENKNNIVLAFIGGLVAAGVIGSAEVCFLIVGHTHIKIDQVFSR 93          
BLAST of mRNA_H-elongata_contig115638.1236.1 vs. uniprot
Match: A0A6H5KA02_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KA02_9PHAE)

HSP 1 Score: 97.8 bits (242), Expect = 9.670e-22
Identity = 47/84 (55.95%), Postives = 60/84 (71.43%), Query Frame = 0
Query:   11 GCHLVCTALHKGLQRLFEEHVPPGKRPFIRHLTLQLDNCVSENKNHIVIGYLGSLVAPGFIGTVSVQFMPVGQTHMKLDQAFSR 94
            G +LVCTAL   L+RL      PG+R +I+ L LQLDNCV ENKN+IV+ ++G LVA G IG+  V F+ VG TH+K+DQ FSR
Sbjct:  122 GSNLVCTALWLALKRLSAMGTKPGQRFYIKRLHLQLDNCVGENKNNIVLAFIGGLVAAGVIGSAEVCFLIVGHTHIKIDQVFSR 205          
BLAST of mRNA_H-elongata_contig115638.1236.1 vs. uniprot
Match: A0A6H5KK38_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KK38_9PHAE)

HSP 1 Score: 95.1 bits (235), Expect = 8.930e-21
Identity = 48/84 (57.14%), Postives = 58/84 (69.05%), Query Frame = 0
Query:   11 GCHLVCTALHKGLQRLFEEHVPPGKRPFIRHLTLQLDNCVSENKNHIVIGYLGSLVAPGFIGTVSVQFMPVGQTHMKLDQAFSR 94
            G +LVCTAL   L+RL E    PG+R  I+ L LQLDNCV ENKN+IV+ ++G LVA G IG+  V F+ VG TH K DQ FSR
Sbjct:  237 GSNLVCTALWLALKRLSEMWNKPGERFHIKRLHLQLDNCVGENKNNIVMAFIGGLVAAGVIGSAEVCFLIVGHTHTKTDQVFSR 320          
BLAST of mRNA_H-elongata_contig115638.1236.1 vs. uniprot
Match: A0A6H5JAR9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAR9_9PHAE)

HSP 1 Score: 87.8 bits (216), Expect = 2.760e-18
Identity = 43/86 (50.00%), Postives = 56/86 (65.12%), Query Frame = 0
Query:    9 ITGCHLVCTALHKGLQRLFEEHVPPGKRPFIRHLTLQLDNCVSENKNHIVIGYLGSLVAPGFIGTVSVQFMPVGQTHMKLDQAFSR 94
            + G +L CT L   L+RL      PG+R  I+   LQLDNCV ENKN+IV+ ++G LVA G IG   V F+ +G TH+K+DQ FSR
Sbjct:    8 LPGSNLECTTLWLALKRLSAMWTKPGERFHIKRRHLQLDNCVGENKNNIVMAFIGGLVAAGVIGFAEVCFLILGHTHIKIDQVFSR 93          
BLAST of mRNA_H-elongata_contig115638.1236.1 vs. uniprot
Match: A0A6H5JXN7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXN7_9PHAE)

HSP 1 Score: 67.0 bits (162), Expect = 6.630e-11
Identity = 29/48 (60.42%), Postives = 37/48 (77.08%), Query Frame = 0
Query:   47 DNCVSENKNHIVIGYLGSLVAPGFIGTVSVQFMPVGQTHMKLDQAFSR 94
            DNCV ENKN+IV+ ++G LVA G IG+  V F+ VG TH+K+DQ FSR
Sbjct:  213 DNCVGENKNNIVLAFIGGLVAAGVIGSAEVCFLIVGHTHIKIDQVFSR 260          
BLAST of mRNA_H-elongata_contig115638.1236.1 vs. uniprot
Match: A0A8B6D6P8_MYTGA (Uncharacterized protein n=1 Tax=Mytilus galloprovincialis TaxID=29158 RepID=A0A8B6D6P8_MYTGA)

HSP 1 Score: 57.0 bits (136), Expect = 2.140e-7
Identity = 27/53 (50.94%), Postives = 32/53 (60.38%), Query Frame = 0
Query:   42 LTLQLDNCVSENKNHIVIGYLGSLVAPGFIGTVSVQFMPVGQTHMKLDQAFSR 94
            L LQ+DNCV ENKN  V G+L  LV       + V F+ VG TH  +DQ FSR
Sbjct:  125 LYLQMDNCVRENKNRFVFGFLSLLVELKVFKKIKVSFLMVGHTHEDIDQVFSR 177          
BLAST of mRNA_H-elongata_contig115638.1236.1 vs. uniprot
Match: UPI0009E411EA (uncharacterized protein LOC110055995 n=1 Tax=Orbicella faveolata TaxID=48498 RepID=UPI0009E411EA)

HSP 1 Score: 55.8 bits (133), Expect = 5.800e-7
Identity = 24/53 (45.28%), Postives = 32/53 (60.38%), Query Frame = 0
Query:   42 LTLQLDNCVSENKNHIVIGYLGSLVAPGFIGTVSVQFMPVGQTHMKLDQAFSR 94
            + +QLDN   ENKN  V  +LG LV       + + F+PVG TH+ +DQ FSR
Sbjct:  499 IAIQLDNTAKENKNQYVFCFLGYLVETDVFSRIEISFLPVGHTHIDVDQMFSR 551          
BLAST of mRNA_H-elongata_contig115638.1236.1 vs. uniprot
Match: UPI00077B10B1 (uncharacterized protein LOC107327737 n=1 Tax=Acropora digitifera TaxID=70779 RepID=UPI00077B10B1)

HSP 1 Score: 50.8 bits (120), Expect = 3.210e-5
Identity = 22/51 (43.14%), Postives = 30/51 (58.82%), Query Frame = 0
Query:   44 LQLDNCVSENKNHIVIGYLGSLVAPGFIGTVSVQFMPVGQTHMKLDQAFSR 94
            +QLDN   ENKN  V  ++  LV       + + F+PVG TH+ +DQ FSR
Sbjct:   96 MQLDNTAKENKNQYVFCFMAYLVETKVFERIEISFLPVGHTHIDVDQMFSR 146          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig115638.1236.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 11
Match NameE-valueIdentityDescription
A0A6H5KUA0_9PHAE5.750e-2975.38Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KN27_9PHAE3.780e-2354.65Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KAY2_9PHAE5.180e-2254.65Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KA02_9PHAE9.670e-2255.95Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KK38_9PHAE8.930e-2157.14Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JAR9_9PHAE2.760e-1850.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JXN7_9PHAE6.630e-1160.42Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A8B6D6P8_MYTGA2.140e-750.94Uncharacterized protein n=1 Tax=Mytilus galloprovi... [more]
UPI0009E411EA5.800e-745.28uncharacterized protein LOC110055995 n=1 Tax=Orbic... [more]
UPI00077B10B13.210e-543.14uncharacterized protein LOC107327737 n=1 Tax=Acrop... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableTMHMMTMhelixcoord: 57..79

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig115638contigH-elongata_contig115638:1710..1994 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig115638.1236.1mRNA_H-elongata_contig115638.1236.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig115638 1710..1994 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig115638.1236.1 ID=prot_H-elongata_contig115638.1236.1|Name=mRNA_H-elongata_contig115638.1236.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=95bp
STSLSVRIITGCHLVCTALHKGLQRLFEEHVPPGKRPFIRHLTLQLDNCV
SENKNHIVIGYLGSLVAPGFIGTVSVQFMPVGQTHMKLDQAFSR*
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