prot_H-elongata_contig112500.1017.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig112500.1017.1
Unique Nameprot_H-elongata_contig112500.1017.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length76
Homology
BLAST of mRNA_H-elongata_contig112500.1017.1 vs. uniprot
Match: D7G1U2_ECTSI (Glycine cleavage system H protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G1U2_ECTSI)

HSP 1 Score: 117 bits (293), Expect = 8.190e-32
Identity = 54/70 (77.14%), Postives = 62/70 (88.57%), Query Frame = 0
Query:    2 DSFGSVESVKAASDVYAPAKGEVVEVNEALSETPGILNEDPEGTGWFMKIKINGEAPDTLMNPDAYKEHC 71
            DSFGSVESVKAASDVY+PA GEV+EVNEAL+E+PGILNEDP G GWF+KIK+   APDTLM+P AY+ HC
Sbjct:   97 DSFGSVESVKAASDVYSPASGEVLEVNEALTESPGILNEDPMGKGWFIKIKMTEPAPDTLMDPAAYETHC 166          
BLAST of mRNA_H-elongata_contig112500.1017.1 vs. uniprot
Match: A0A7R9Z823_9STRA (Glycine cleavage system H protein n=2 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9Z823_9STRA)

HSP 1 Score: 101 bits (252), Expect = 9.840e-26
Identity = 48/74 (64.86%), Postives = 56/74 (75.68%), Query Frame = 0
Query:    2 DSFGSVESVKAASDVYAPAKGEVVEVNEALSETPGILNEDPEGTGWFMKIKINGEAP-DTLMNPDAYKEHCAKE 74
            DSFGSVESVKAASDVYAP  GE+VEVNE L++ PG++N   EG  WF+KIK+  E+  D LM  D YKEHC KE
Sbjct:   84 DSFGSVESVKAASDVYAPVSGEIVEVNETLTDEPGLVNTAAEGDAWFIKIKVTDESELDDLMTSDMYKEHCEKE 157          
BLAST of mRNA_H-elongata_contig112500.1017.1 vs. uniprot
Match: A0A1Z5K173_FISSO (Glycine cleavage system H protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K173_FISSO)

HSP 1 Score: 97.8 bits (242), Expect = 3.040e-24
Identity = 47/74 (63.51%), Postives = 57/74 (77.03%), Query Frame = 0
Query:    2 DSFGSVESVKAASDVYAPAKGEVVEVNEALSETPGILNEDPEGTGWFMKIKINGEAP-DTLMNPDAYKEHCAKE 74
            +SFGSVESVKAASDVYAP  G VVEVNE LS+ PG++N + EG  WF+KI++  EA   +LMN DAYK HC +E
Sbjct:   82 ESFGSVESVKAASDVYAPVSGTVVEVNEILSDEPGMVNSEAEGKAWFVKIEMKDEAELKSLMNADAYKTHCEEE 155          
BLAST of mRNA_H-elongata_contig112500.1017.1 vs. uniprot
Match: B7FST3_PHATC (Glycine cleavage system H protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FST3_PHATC)

HSP 1 Score: 97.8 bits (242), Expect = 3.040e-24
Identity = 47/75 (62.67%), Postives = 58/75 (77.33%), Query Frame = 0
Query:    2 DSFGSVESVKAASDVYAPAKGEVVEVNEALSETPGILNEDPEGTGWFMKIKI--NGEAPDTLMNPDAYKEHCAKE 74
            DSFGSVESVKAASDVYAP  G VVE+N+ LS+ PG++N   EG  WF+KI++  +G+  D L+ PDAYKEHC KE
Sbjct:   82 DSFGSVESVKAASDVYAPISGTVVEINDKLSDDPGLVNTQAEGEAWFIKIEMAESGDVDD-LLGPDAYKEHCEKE 155          
BLAST of mRNA_H-elongata_contig112500.1017.1 vs. uniprot
Match: B8C5A8_THAPS (Glycine cleavage system H protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C5A8_THAPS)

HSP 1 Score: 96.7 bits (239), Expect = 3.660e-24
Identity = 44/75 (58.67%), Postives = 59/75 (78.67%), Query Frame = 0
Query:    1 RDSFGSVESVKAASDVYAPAKGEVVEVNEALSETPGILNEDPEGTGWFMKIKINGEAP-DTLMNPDAYKEHCAKE 74
            +DSFGSVESVKAASDVYAP  G+V+EVNEAL++ PG++N + E   WF+K+++  E   ++LMN + YKEHC KE
Sbjct:   49 KDSFGSVESVKAASDVYAPVSGKVLEVNEALTDEPGMVNSNAEDDAWFIKLEMGDEGELESLMNAEQYKEHCEKE 123          
BLAST of mRNA_H-elongata_contig112500.1017.1 vs. uniprot
Match: A0A7S2V4N2_9STRA (Glycine cleavage system H protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V4N2_9STRA)

HSP 1 Score: 96.7 bits (239), Expect = 8.420e-24
Identity = 45/71 (63.38%), Postives = 56/71 (78.87%), Query Frame = 0
Query:    2 DSFGSVESVKAASDVYAPAKGEVVEVNEALSETPGILNEDPEGTGWFMKIKINGEAP-DTLMNPDAYKEHC 71
            +SFGSVESVKAASDVY P  GE+V  NEALS+TPG +NE  EG GWFMKIK++  +  D LM+ +AY++HC
Sbjct:   83 ESFGSVESVKAASDVYTPVSGEIVAANEALSDTPGTVNESAEGDGWFMKIKLSDPSELDDLMDLEAYQKHC 153          
BLAST of mRNA_H-elongata_contig112500.1017.1 vs. uniprot
Match: A0A7S0C7W5_9STRA (Glycine cleavage system H protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0C7W5_9STRA)

HSP 1 Score: 96.7 bits (239), Expect = 9.590e-24
Identity = 49/75 (65.33%), Postives = 57/75 (76.00%), Query Frame = 0
Query:    2 DSFGSVESVKAASDVYAPAKGEVVEVNEALSETPGILNEDPEGTGWFMKIKI--NGEAPDTLMNPDAYKEHCAKE 74
            +SFGSVESVKAASDVY P  G VVE+NEALS+ PGI+N   E   WF+KI+I  +GE  + LM PDAYKEHC KE
Sbjct:   86 ESFGSVESVKAASDVYCPVGGTVVEINEALSDEPGIVNTKAESDAWFIKIEIEDDGELGE-LMEPDAYKEHCEKE 159          
BLAST of mRNA_H-elongata_contig112500.1017.1 vs. uniprot
Match: A0A6P2B6J6_9CHLR (Glycine cleavage system H protein n=1 Tax=Anaerolineaceae bacterium TaxID=2024896 RepID=A0A6P2B6J6_9CHLR)

HSP 1 Score: 94.4 bits (233), Expect = 3.150e-23
Identity = 46/71 (64.79%), Postives = 55/71 (77.46%), Query Frame = 0
Query:    2 DSFGSVESVKAASDVYAPAKGEVVEVNEALSETPGILNEDPEGTGWFMKIKINGEAP-DTLMNPDAYKEHC 71
            DSFGSVESVKAASDVYA   GEVVE+NEAL + P I+N DP G GW +KIK++GEA    LM+ +AYK +C
Sbjct:   54 DSFGSVESVKAASDVYAHVGGEVVEINEALEDEPEIINADPYGKGWMVKIKLSGEADLSDLMDAEAYKAYC 124          
BLAST of mRNA_H-elongata_contig112500.1017.1 vs. uniprot
Match: A0A7S2YP38_9STRA (Glycine cleavage system H protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2YP38_9STRA)

HSP 1 Score: 95.1 bits (235), Expect = 5.620e-23
Identity = 43/74 (58.11%), Postives = 57/74 (77.03%), Query Frame = 0
Query:    2 DSFGSVESVKAASDVYAPAKGEVVEVNEALSETPGILNEDPEGTGWFMKIKINGEAP-DTLMNPDAYKEHCAKE 74
            DSFGSVESVKAASDVYAP  G+V+E+NE L + PG++N++ E   WF+K++I+ E    +LMN + YKEHC KE
Sbjct:  101 DSFGSVESVKAASDVYAPVSGKVIEINEPLGDDPGMVNKEAESGAWFIKMEISDEGELSSLMNEEEYKEHCEKE 174          
BLAST of mRNA_H-elongata_contig112500.1017.1 vs. uniprot
Match: A0A6U3XE37_9STRA (Glycine cleavage system H protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3XE37_9STRA)

HSP 1 Score: 94.7 bits (234), Expect = 5.740e-23
Identity = 45/74 (60.81%), Postives = 54/74 (72.97%), Query Frame = 0
Query:    2 DSFGSVESVKAASDVYAPAKGEVVEVNEALSETPGILNEDPEGTGWFMKIKINGEAP-DTLMNPDAYKEHCAKE 74
            DSFGSVESVKAASDVYAP  G VVE+NE LS+ PG++N   EG GWF+KI+++ E   D LM  + YK HC  E
Sbjct:   88 DSFGSVESVKAASDVYAPVSGTVVEINEVLSDEPGVVNTSAEGEGWFVKIEMSEEGELDDLMGEEDYKAHCEAE 161          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig112500.1017.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G1U2_ECTSI8.190e-3277.14Glycine cleavage system H protein n=2 Tax=Ectocarp... [more]
A0A7R9Z823_9STRA9.840e-2664.86Glycine cleavage system H protein n=2 Tax=Pseudict... [more]
A0A1Z5K173_FISSO3.040e-2463.51Glycine cleavage system H protein n=2 Tax=Fistulif... [more]
B7FST3_PHATC3.040e-2462.67Glycine cleavage system H protein n=2 Tax=Phaeodac... [more]
B8C5A8_THAPS3.660e-2458.67Glycine cleavage system H protein n=1 Tax=Thalassi... [more]
A0A7S2V4N2_9STRA8.420e-2463.38Glycine cleavage system H protein n=1 Tax=Fibrocap... [more]
A0A7S0C7W5_9STRA9.590e-2465.33Glycine cleavage system H protein n=1 Tax=Probosci... [more]
A0A6P2B6J6_9CHLR3.150e-2364.79Glycine cleavage system H protein n=1 Tax=Anaeroli... [more]
A0A7S2YP38_9STRA5.620e-2358.11Glycine cleavage system H protein n=1 Tax=Amphipro... [more]
A0A6U3XE37_9STRA5.740e-2360.81Glycine cleavage system H protein n=1 Tax=Ditylum ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR033753Glycine cleavage system H-protein/SimiatePFAMPF01597GCV_Hcoord: 2..73
e-value: 1.0E-22
score: 80.3
NoneNo IPR availableGENE3D2.40.50.100coord: 1..74
e-value: 1.3E-24
score: 88.3
IPR002930Glycine cleavage system H-proteinPANTHERPTHR11715GLYCINE CLEAVAGE SYSTEM H PROTEINcoord: 2..74
IPR000089Biotin/lipoyl attachmentPROSITEPS50968BIOTINYL_LIPOYLcoord: 1..52
score: 19.778
IPR011053Single hybrid motifSUPERFAMILY51230Single hybrid motifcoord: 2..72

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig112500contigH-elongata_contig112500:820..1918 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig112500.1017.1mRNA_H-elongata_contig112500.1017.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig112500 820..1918 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig112500.1017.1 ID=prot_H-elongata_contig112500.1017.1|Name=mRNA_H-elongata_contig112500.1017.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=76bp
RDSFGSVESVKAASDVYAPAKGEVVEVNEALSETPGILNEDPEGTGWFMK
IKINGEAPDTLMNPDAYKEHCAKEG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR033753GCV_H/Fam206
IPR002930GCV_H
IPR000089Biotin_lipoyl
IPR011053Single_hybrid_motif