prot_H-elongata_contig1125.1016.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig1125.1016.1
Unique Nameprot_H-elongata_contig1125.1016.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length178
Homology
BLAST of mRNA_H-elongata_contig1125.1016.1 vs. uniprot
Match: A0A6H5JHN3_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JHN3_9PHAE)

HSP 1 Score: 189 bits (479), Expect = 3.290e-52
Identity = 95/155 (61.29%), Postives = 117/155 (75.48%), Query Frame = 0
Query:    1 MVPVSSSHDRGFALLDMGHAVVRGGSVEDGGMEYSAEVSDITARFPVRKALLLKGTGDTFIEPFKIKAKVALGEDVSKPGLALTVDVLPGVIGVVSPAKIRHAFQVLDYVTKADLVAMDGQEDPPIGLAGPNPSNGGGRLGLELMGDDALKPAEG 155
            +VPVSSS D GF LLDMG  +V GG+V+ GGM Y+AE+SD+  R P +KALL+KGT D  +EPFKIK   A+G   SKPG+AL V+V+PGV GV+SPAKIR  F+VLDYVTKADL A  G  +PP+GLA PN + GGG +G+ELMGD+ L   EG
Sbjct:  323 VVPVSSSRDNGFVLLDMGRMLVAGGTVDGGGMAYTAELSDMNVRLPAKKALLVKGTEDAVVEPFKIKVDAAMGGGDSKPGMALAVEVMPGVKGVMSPAKIRGLFRVLDYVTKADLKAEGGPGEPPVGLAAPNTAPGGGGIGVELMGDEGLVALEG 477          
BLAST of mRNA_H-elongata_contig1125.1016.1 vs. uniprot
Match: A0A6H5L0S6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0S6_9PHAE)

HSP 1 Score: 168 bits (426), Expect = 4.380e-45
Identity = 90/148 (60.81%), Postives = 108/148 (72.97%), Query Frame = 0
Query:    1 MVPVSSSHDRGFALLDMGHAVVRGGSVEDGGMEYSAEVSDITARFPVRKALLL-KGTGDTFIEPFKIKAKVALGEDVSKPGLALTVDVLPGVIGVVSPAKIRHAFQVLDYVTKADLVAMDGQEDPPIGLAGPNPSNGGGRLGLELMGD 147
            +VPVSSS D GF LLDMGH +V GGSVE G M YSAE+SD+  RFP  ++LLL +   D  IEPFKIKA V +G  +SKPG+A  V+V+PGV GV+SP KIR   +VLDYVTKADL    G+  PP+GLA PN S GGG LG+E MG+
Sbjct:   63 VVPVSSSLDAGFVLLDMGHLLVEGGSVEGGAMAYSAELSDMNVRFPAERSLLLVRSEMDAVIEPFKIKADVTVGGGISKPGMAFVVEVMPGVRGVMSPVKIRGLLRVLDYVTKADL----GRGGPPVGLAAPNTSTGGGGLGVERMGE 206          
BLAST of mRNA_H-elongata_contig1125.1016.1 vs. uniprot
Match: D8LPW3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPW3_ECTSI)

HSP 1 Score: 168 bits (426), Expect = 4.420e-45
Identity = 91/148 (61.49%), Postives = 108/148 (72.97%), Query Frame = 0
Query:    1 MVPVSSSHDRGFALLDMGHAVVRGGSVEDGGMEYSAEVSDITARFPVRKALLL-KGTGDTFIEPFKIKAKVALGEDVSKPGLALTVDVLPGVIGVVSPAKIRHAFQVLDYVTKADLVAMDGQEDPPIGLAGPNPSNGGGRLGLELMGD 147
            +VPVSSS D GF LLDMGH +V GGSVE G M YSAE+SD+  RFP  ++LLL +   D  IEPFKIKA V +G  VSKPG+A  V+V+PGV GV+SP KIR   +VLDYVTKADL    G+  PP+GLA PN S GGG LG+E MG+
Sbjct:  676 VVPVSSSLDAGFVLLDMGHMLVEGGSVEGGAMAYSAELSDMNVRFPAERSLLLVRSEMDAVIEPFKIKADVTVGGGVSKPGMAFAVEVMPGVRGVMSPEKIRGLLRVLDYVTKADL----GRGGPPVGLAAPNTSTGGGGLGVERMGE 819          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig1125.1016.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5JHN3_9PHAE3.290e-5261.29Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6H5L0S6_9PHAE4.380e-4560.81Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LPW3_ECTSI4.420e-4561.49Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig1125contigH-elongata_contig1125:4648..7220 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig1125.1016.1mRNA_H-elongata_contig1125.1016.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig1125 4648..7220 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig1125.1016.1 ID=prot_H-elongata_contig1125.1016.1|Name=mRNA_H-elongata_contig1125.1016.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=178bp
MVPVSSSHDRGFALLDMGHAVVRGGSVEDGGMEYSAEVSDITARFPVRKA
LLLKGTGDTFIEPFKIKAKVALGEDVSKPGLALTVDVLPGVIGVVSPAKI
RHAFQVLDYVTKADLVAMDGQEDPPIGLAGPNPSNGGGRLGLELMGDDAL
KPAEGGETALDTEGSDEAEEKKEKEKEE
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