prot_H-elongata_contig112122.986.1 (polypeptide) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig112122.986.1 vs. uniprot
Match: W9RQX6_9ROSA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Morus notabilis TaxID=981085 RepID=W9RQX6_9ROSA) HSP 1 Score: 59.7 bits (143), Expect = 7.510e-9 Identity = 27/62 (43.55%), Postives = 40/62 (64.52%), Query Frame = 0
Query: 3 LSMIAALDWEARQLDVGMVYLEADVKEEIYVELPEAYRDSKKQVGLLKKAMYGLVHAGLLWY 64
LS+ A LDW +QLDV +L D++EE+Y+E+P + D QV LKK++YGL + W+
Sbjct: 75 LSITANLDWSLQQLDVKNAFLNGDLEEEVYMEMPPGFEDKGDQVCKLKKSLYGLKQSPRAWF 136
BLAST of mRNA_H-elongata_contig112122.986.1 vs. uniprot
Match: A0A8J6DDM6_9ROSI (Integrase catalytic domain-containing protein n=1 Tax=Gossypium anomalum TaxID=47600 RepID=A0A8J6DDM6_9ROSI) HSP 1 Score: 58.5 bits (140), Expect = 1.910e-8 Identity = 26/62 (41.94%), Postives = 39/62 (62.90%), Query Frame = 0
Query: 3 LSMIAALDWEARQLDVGMVYLEADVKEEIYVELPEAYRDSKKQVGLLKKAMYGLVHAGLLWY 64
LS+ A LDW QLDV +L ++ EE+Y++ P + +SK QV LKK++YGL + W+
Sbjct: 440 LSLAANLDWHLTQLDVKNAFLNGELNEEVYIDFPPGFEESKGQVCKLKKSLYGLKQSPRAWF 501
BLAST of mRNA_H-elongata_contig112122.986.1 vs. uniprot
Match: A0A8J6D7M8_9ROSI (Integrase catalytic domain-containing protein n=1 Tax=Gossypium anomalum TaxID=47600 RepID=A0A8J6D7M8_9ROSI) HSP 1 Score: 57.8 bits (138), Expect = 3.570e-8 Identity = 26/62 (41.94%), Postives = 39/62 (62.90%), Query Frame = 0
Query: 3 LSMIAALDWEARQLDVGMVYLEADVKEEIYVELPEAYRDSKKQVGLLKKAMYGLVHAGLLWY 64
LS+ A LDW QLDV +L ++ EE+Y++ P + +SK QV LKK++YGL + W+
Sbjct: 784 LSLAANLDWHLTQLDVKNTFLNGELSEEVYMDFPPGFEESKGQVCKLKKSLYGLKQSPRAWF 845
BLAST of mRNA_H-elongata_contig112122.986.1 vs. uniprot
Match: A0A8J6D396_9ROSI (Integrase catalytic domain-containing protein n=1 Tax=Gossypium anomalum TaxID=47600 RepID=A0A8J6D396_9ROSI) HSP 1 Score: 57.8 bits (138), Expect = 3.580e-8 Identity = 26/62 (41.94%), Postives = 39/62 (62.90%), Query Frame = 0
Query: 3 LSMIAALDWEARQLDVGMVYLEADVKEEIYVELPEAYRDSKKQVGLLKKAMYGLVHAGLLWY 64
LS+ A LDW QLDV +L ++ EE+Y++ P + +SK QV LKK++YGL + W+
Sbjct: 888 LSLAANLDWHLTQLDVKNAFLNGELSEEVYMDFPPGFEESKGQVCKLKKSLYGLKQSPRAWF 949
BLAST of mRNA_H-elongata_contig112122.986.1 vs. uniprot
Match: A0A401GM49_9APHY (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Sparassis crispa TaxID=139825 RepID=A0A401GM49_9APHY) HSP 1 Score: 57.4 bits (137), Expect = 4.920e-8 Identity = 27/62 (43.55%), Postives = 38/62 (61.29%), Query Frame = 0
Query: 3 LSMIAALDWEARQLDVGMVYLEADVKEEIYVELPEAYRDSKKQVGLLKKAMYGLVHAGLLWY 64
L++ A LD E Q+DV +L D+ EEIY+ +P ++R K + L KA+YGL AG WY
Sbjct: 975 LALTAKLDLEIHQMDVKSAFLNGDLDEEIYMNIPPSFRKDNKLIWRLNKALYGLKQAGHKWY 1036
BLAST of mRNA_H-elongata_contig112122.986.1 vs. uniprot
Match: A0A8J5Z0V2_9ROSI (Integrase catalytic domain-containing protein n=1 Tax=Gossypium anomalum TaxID=47600 RepID=A0A8J5Z0V2_9ROSI) HSP 1 Score: 57.0 bits (136), Expect = 6.710e-8 Identity = 26/62 (41.94%), Postives = 39/62 (62.90%), Query Frame = 0
Query: 3 LSMIAALDWEARQLDVGMVYLEADVKEEIYVELPEAYRDSKKQVGLLKKAMYGLVHAGLLWY 64
LS+ A LDW QLDV +L ++ EE+Y++ P + +SK QV LKK++YGL + W+
Sbjct: 670 LSLAANLDWHLTQLDVKNAFLNRELSEEVYMDFPPGFEESKGQVCKLKKSLYGLKQSPPAWF 731
BLAST of mRNA_H-elongata_contig112122.986.1 vs. uniprot
Match: A0A0C3DBP3_9AGAM (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Scleroderma citrinum Foug A TaxID=1036808 RepID=A0A0C3DBP3_9AGAM) HSP 1 Score: 55.8 bits (133), Expect = 1.710e-7 Identity = 29/63 (46.03%), Postives = 40/63 (63.49%), Query Frame = 0
Query: 3 LSMIAALDWEARQLDVGMVYLEADVKEEIYVELPEAYRDSKKQ--VGLLKKAMYGLVHAGLLW 63
LS++A DWE Q+DV YL+ D+ EEIY+E+PE ++ K+ L KA+YGL AG W
Sbjct: 645 LSIVAHEDWELHQVDVVGAYLQGDLDEEIYMEVPEGVKEKGKEGWYWKLTKALYGLKQAGRQW 707
BLAST of mRNA_H-elongata_contig112122.986.1 vs. uniprot
Match: A0A8J5Y6D9_9ROSI (Integrase catalytic domain-containing protein n=1 Tax=Gossypium anomalum TaxID=47600 RepID=A0A8J5Y6D9_9ROSI) HSP 1 Score: 53.1 bits (126), Expect = 1.540e-6 Identity = 24/62 (38.71%), Postives = 38/62 (61.29%), Query Frame = 0
Query: 3 LSMIAALDWEARQLDVGMVYLEADVKEEIYVELPEAYRDSKKQVGLLKKAMYGLVHAGLLWY 64
LS+ L+W QLDV +L ++ EE+Y++ P + +SK QV LKK++YGL + W+
Sbjct: 723 LSIAVNLEWPLIQLDVKNAFLNGELNEEVYMDFPPGFEESKGQVCKLKKSLYGLKQSPRAWF 784
BLAST of mRNA_H-elongata_contig112122.986.1 vs. uniprot
Match: O65452_ARATH (LTR retrotransposon like protein n=2 Tax=Arabidopsis thaliana TaxID=3702 RepID=O65452_ARATH) HSP 1 Score: 53.1 bits (126), Expect = 1.540e-6 Identity = 25/63 (39.68%), Postives = 39/63 (61.90%), Query Frame = 0
Query: 3 LSMIAALDWEARQLDVGMVYLEADVKEEIYVELPEAYR-DSKKQVGLLKKAMYGLVHAGLLWY 64
L + AA DW Q+DV +L D+KEE+Y++LP+ ++ D +V L K++YGL A W+
Sbjct: 694 LGVAAARDWHVHQMDVHNAFLHGDLKEEVYMKLPQGFQCDDPSKVCRLHKSLYGLKQAPRCWF 756
BLAST of mRNA_H-elongata_contig112122.986.1 vs. uniprot
Match: A0A5S9X0X4_ARATH (Integrase catalytic domain-containing protein n=2 Tax=Arabidopsis thaliana TaxID=3702 RepID=A0A5S9X0X4_ARATH) HSP 1 Score: 53.1 bits (126), Expect = 1.540e-6 Identity = 25/63 (39.68%), Postives = 39/63 (61.90%), Query Frame = 0
Query: 3 LSMIAALDWEARQLDVGMVYLEADVKEEIYVELPEAYR-DSKKQVGLLKKAMYGLVHAGLLWY 64
L + AA DW Q+DV +L D+KEE+Y++LP+ ++ D +V L K++YGL A W+
Sbjct: 1001 LGVAAARDWHVHQMDVHNAFLHGDLKEEVYMKLPQGFQCDDPSKVCRLHKSLYGLKQAPRCWF 1063 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig112122.986.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-elongata_contig112122.986.1 ID=prot_H-elongata_contig112122.986.1|Name=mRNA_H-elongata_contig112122.986.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=64bpback to top Annotated Terms
The following terms have been associated with this polypeptide:
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