prot_H-elongata_contig111778.957.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig111778.957.1
Unique Nameprot_H-elongata_contig111778.957.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length196
Homology
BLAST of mRNA_H-elongata_contig111778.957.1 vs. uniprot
Match: D8LH21_ECTSI (RNA helicase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH21_ECTSI)

HSP 1 Score: 362 bits (928), Expect = 4.450e-119
Identity = 181/197 (91.88%), Postives = 188/197 (95.43%), Query Frame = 0
Query:    1 YDDIPVETSGENVPDPISSFEPEMLGEELMLTTKLCGYHKPTPVQKYSIPIGISNRDLMACAQTGSGKTAGFLFPTLITLLRRGGPQYP-EGRRKSYPVALVLAPTRELASQIQDEARRFCYRSGIAPVVIYGGADVRSQVRELERGCDLLVATPGRLVDLIERGRISLCCIQFLVLDEADRMLDMGFEPQIRRIVE 196
            YDDIPVETSGENVP+PI SFE +MLGE+LM TT LCGY KPTPVQKYSIPIGISNRDLMACAQTGSGKTAGFLFPTLI+LLRRGGPQYP +GRRKSYPVALVLAPTRELASQI DEARRFCYR+GIAPVVIYGGADVRSQ RELERGCDLLVATPGRLVDL+ERGRISL CIQFLVLDEADRMLDMGFEPQIRRIVE
Sbjct:  192 YDDIPVETSGENVPEPIDSFELDMLGEDLMRTTNLCGYTKPTPVQKYSIPIGISNRDLMACAQTGSGKTAGFLFPTLISLLRRGGPQYPNDGRRKSYPVALVLAPTRELASQIYDEARRFCYRTGIAPVVIYGGADVRSQFRELERGCDLLVATPGRLVDLLERGRISLACIQFLVLDEADRMLDMGFEPQIRRIVE 388          
BLAST of mRNA_H-elongata_contig111778.957.1 vs. uniprot
Match: A0A6H5JCH1_9PHAE (RNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCH1_9PHAE)

HSP 1 Score: 362 bits (928), Expect = 2.600e-118
Identity = 181/197 (91.88%), Postives = 188/197 (95.43%), Query Frame = 0
Query:    1 YDDIPVETSGENVPDPISSFEPEMLGEELMLTTKLCGYHKPTPVQKYSIPIGISNRDLMACAQTGSGKTAGFLFPTLITLLRRGGPQYP-EGRRKSYPVALVLAPTRELASQIQDEARRFCYRSGIAPVVIYGGADVRSQVRELERGCDLLVATPGRLVDLIERGRISLCCIQFLVLDEADRMLDMGFEPQIRRIVE 196
            YDDIPVETSGENVP+PI SFE +MLGE+LM TT LCGY KPTPVQKYSIPIGISNRDLMACAQTGSGKTAGFLFPTLI+LLRRGGPQYP +GRRKSYPVALVLAPTRELASQI DEARRFCYR+GIAPVVIYGGADVRSQ RELERGCDLLVATPGRLVDL+ERGRISL CIQFLVLDEADRMLDMGFEPQIRRIVE
Sbjct:  275 YDDIPVETSGENVPEPIDSFELDMLGEDLMRTTNLCGYTKPTPVQKYSIPIGISNRDLMACAQTGSGKTAGFLFPTLISLLRRGGPQYPNDGRRKSYPVALVLAPTRELASQIYDEARRFCYRTGIAPVVIYGGADVRSQFRELERGCDLLVATPGRLVDLLERGRISLACIQFLVLDEADRMLDMGFEPQIRRIVE 471          
BLAST of mRNA_H-elongata_contig111778.957.1 vs. uniprot
Match: A0A835ZB12_9STRA (RNA helicase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZB12_9STRA)

HSP 1 Score: 329 bits (844), Expect = 2.090e-107
Identity = 163/200 (81.50%), Postives = 183/200 (91.50%), Query Frame = 0
Query:    1 YDDIPVETSGENVPDPISSFEPEMLGEELMLTTKLCGYHKPTPVQKYSIPIGISNRDLMACAQTGSGKTAGFLFPTLITLLRRGGPQYPE--GRRK--SYPVALVLAPTRELASQIQDEARRFCYRSGIAPVVIYGGADVRSQVRELERGCDLLVATPGRLVDLIERGRISLCCIQFLVLDEADRMLDMGFEPQIRRIVE 196
            YDDIPVETSGENVP+PI +F P++LG ELM  T+LCGY KPTPVQKYSIPIGIS RDLMACAQTGSGKTAGFLFPTLI+LLR GGP+YP+  GRR+  +YPVALVLAPTRELASQI DEARRFCY +G+APVVIYGGA+ RSQ+R+L+RGCDLLVATPGRLVD IERG++SL CI+FLVLDEADRMLDMGFEPQIRRIV+
Sbjct:  114 YDDIPVETSGENVPEPIETFPPDVLGPELMRCTELCGYTKPTPVQKYSIPIGISGRDLMACAQTGSGKTAGFLFPTLISLLRTGGPEYPDDGGRRQRTTYPVALVLAPTRELASQIYDEARRFCYCTGVAPVVIYGGAEARSQLRDLDRGCDLLVATPGRLVDFIERGKVSLQCIKFLVLDEADRMLDMGFEPQIRRIVQ 313          
BLAST of mRNA_H-elongata_contig111778.957.1 vs. uniprot
Match: A0A836CEH0_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEH0_9STRA)

HSP 1 Score: 317 bits (812), Expect = 7.840e-100
Identity = 166/229 (72.49%), Postives = 183/229 (79.91%), Query Frame = 0
Query:    1 YDDIPVETSGENVPDPISSFEPEMLGEELMLTTKLCGYHKPTPVQKYSIPIGISNRDLMACAQTGSGKTAGFLFPTLITLLRRGGPQ-----------------------------YPE--GRRKS--YPVALVLAPTRELASQIQDEARRFCYRSGIAPVVIYGGADVRSQVRELERGCDLLVATPGRLVDLIERGRISLCCIQFLVLDEADRMLDMGFEPQIRRIVE 196
            YDDIPVETSGENVP+PI +F PE+LG ELM +T+LCGY KPTPVQKYSIPIGIS RDLMACAQTGSGKTAGFLFPTLI+LLR GGPQ                             YPE  GRR+   YPVALVLAPTRELASQI DEARRFCY +G+APVVIYGGA+ R+Q+R+L+RGCDLLVATPGRLVD IERG++SL CI+FLVLDEADRMLDMGFEPQIRRIVE
Sbjct:   69 YDDIPVETSGENVPEPIETFPPEILGPELMRSTELCGYLKPTPVQKYSIPIGISGRDLMACAQTGSGKTAGFLFPTLISLLRTGGPQKQKCLNVPIRSQRSFNNQLPLIAAASAAQYPEDGGRRQRSVYPVALVLAPTRELASQIYDEARRFCYCTGVAPVVIYGGAEARTQLRDLDRGCDLLVATPGRLVDFIERGKVSLQCIRFLVLDEADRMLDMGFEPQIRRIVE 297          
BLAST of mRNA_H-elongata_contig111778.957.1 vs. uniprot
Match: A0A662XJH5_9STRA (RNA helicase (Fragment) n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XJH5_9STRA)

HSP 1 Score: 300 bits (767), Expect = 7.910e-100
Identity = 150/200 (75.00%), Postives = 169/200 (84.50%), Query Frame = 0
Query:    1 YDDIPVETSGENVPDPISSFEPEMLGEELMLTTKLCGYHKPTPVQKYSIPIGISNRDLMACAQTGSGKTAGFLFPTLITLLRRGGPQYPE---GR-RKSYPVALVLAPTRELASQIQDEARRFCYRSGIAPVVIYGGADVRSQVRELERGCDLLVATPGRLVDLIERGRISLCCIQFLVLDEADRMLDMGFEPQIRRIVE 196
            YDDIPVETSGENVPDP+  F  E LG E++   +LC Y KPTPVQKYSIPIG+  RD+MACAQTGSGKT GFLFPTL  +LR GG   P+   GR RK +P AL+LAPTRELASQI DEA++FCY +GIAPVVIYGGA+V  Q+RELERGCD+LVATPGRLVDL+ERGRISL CI+FL+LDEADRMLDMGFEPQIRRIVE
Sbjct:   28 YDDIPVETSGENVPDPVLEFSAEELGPEVIRNLELCKYSKPTPVQKYSIPIGLQGRDMMACAQTGSGKTGGFLFPTLAAMLRVGGTPPPDVGHGRSRKIFPAALILAPTRELASQIYDEAKKFCYCTGIAPVVIYGGAEVGHQLRELERGCDMLVATPGRLVDLMERGRISLSCIRFLILDEADRMLDMGFEPQIRRIVE 227          
BLAST of mRNA_H-elongata_contig111778.957.1 vs. uniprot
Match: A0A7S3XUS5_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XUS5_HETAK)

HSP 1 Score: 305 bits (782), Expect = 7.990e-100
Identity = 152/199 (76.38%), Postives = 171/199 (85.93%), Query Frame = 0
Query:    1 YDDIPVETSGENVPDPISSFEPEMLGEELMLTTKLCGYHKPTPVQKYSIPIGISNRDLMACAQTGSGKTAGFLFPTLITLLRRGGPQYPEG---RRKSYPVALVLAPTRELASQIQDEARRFCYRSGIAPVVIYGGADVRSQVRELERGCDLLVATPGRLVDLIERGRISLCCIQFLVLDEADRMLDMGFEPQIRRIVE 196
            YDDIPVE SGENVP  I +F  E++GE LM  T LC Y+KPTPVQ+YSIPIG  +RDLMACAQTGSGKTAGFLFP LI++L +G P  PE     R+++P ALVLAPTRELASQI DEA+RFCY +GIAPVVIYGGADVR+Q+RELERGCDLLVATPGRLVDLIERGR+SL C+ FL+LDEADRMLDMGFEPQIRRIVE
Sbjct:   55 YDDIPVEVSGENVPPHIETFSVEVIGERLMANTVLCQYNKPTPVQRYSIPIGKESRDLMACAQTGSGKTAGFLFPVLISMLTKGPPAPPEEGGYARRTHPNALVLAPTRELASQIYDEAKRFCYATGIAPVVIYGGADVRNQLRELERGCDLLVATPGRLVDLIERGRVSLACVNFLILDEADRMLDMGFEPQIRRIVE 253          
BLAST of mRNA_H-elongata_contig111778.957.1 vs. uniprot
Match: A0A7S2V445_9STRA (RNA helicase (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V445_9STRA)

HSP 1 Score: 301 bits (772), Expect = 1.760e-98
Identity = 150/199 (75.38%), Postives = 172/199 (86.43%), Query Frame = 0
Query:    1 YDDIPVETSGENVPDPISSFEPEMLGEELMLTTKLCGYHKPTPVQKYSIPIGISNRDLMACAQTGSGKTAGFLFPTLITLLRRGGP-QYPEG--RRKSYPVALVLAPTRELASQIQDEARRFCYRSGIAPVVIYGGADVRSQVRELERGCDLLVATPGRLVDLIERGRISLCCIQFLVLDEADRMLDMGFEPQIRRIVE 196
            Y DIPVE SG+N PDP+S F PE++GE+LM  T LC Y+KPTPVQ+YSIPIG   RDLMACAQTGSGKTAGFLFP L +++  G P Q  +G  RRK++PVALVLAPTRELASQI +EARRFCY +G+APVV+YGGADVR Q+R+LERGCDLLVATPGRLVDL+ERGR+SL  I+FLVLDEADRMLDMGFEPQIRRIVE
Sbjct:   49 YFDIPVEVSGDNAPDPVSEFTPELVGEQLMRNTVLCNYNKPTPVQRYSIPIGAQGRDLMACAQTGSGKTAGFLFPVLTSMITNGAPPQQGQGGYRRKTFPVALVLAPTRELASQIFNEARRFCYCTGVAPVVVYGGADVRVQLRDLERGCDLLVATPGRLVDLMERGRVSLLNIRFLVLDEADRMLDMGFEPQIRRIVE 247          
BLAST of mRNA_H-elongata_contig111778.957.1 vs. uniprot
Match: H3G780_PHYRM (RNA helicase n=3 Tax=Phytophthora TaxID=4783 RepID=H3G780_PHYRM)

HSP 1 Score: 300 bits (769), Expect = 4.580e-98
Identity = 150/200 (75.00%), Postives = 171/200 (85.50%), Query Frame = 0
Query:    1 YDDIPVETSGENVPDPISSFEPEMLGEELMLTTKLCGYHKPTPVQKYSIPIGISNRDLMACAQTGSGKTAGFLFPTLITLLRRGGPQYPE---GR-RKSYPVALVLAPTRELASQIQDEARRFCYRSGIAPVVIYGGADVRSQVRELERGCDLLVATPGRLVDLIERGRISLCCIQFLVLDEADRMLDMGFEPQIRRIVE 196
            YDDIPVETSGENVPDP+S F  E LG E++   +LC Y KPTPVQKYSIPIG++ RD+MACAQTGSGKT GFLFPTL  +LR GG   P+   GR RK +P AL+L+PTRELASQI +EA++FCY +GIAPVVIYGGA+V  Q+RELERGCDLLVATPGRLVDL+ERGRISL CI+FL+LDEADRMLDMGFEPQIRRIVE
Sbjct:   22 YDDIPVETSGENVPDPVSEFAAEELGPEVIRNLELCKYDKPTPVQKYSIPIGLAGRDMMACAQTGSGKTGGFLFPTLAAMLRVGGTPPPDVGHGRSRKIFPAALILSPTRELASQIHEEAKKFCYCTGIAPVVIYGGAEVGRQLRELERGCDLLVATPGRLVDLMERGRISLSCIRFLILDEADRMLDMGFEPQIRRIVE 221          
BLAST of mRNA_H-elongata_contig111778.957.1 vs. uniprot
Match: W7TYZ7_9STRA (RNA helicase n=4 Tax=Monodopsidaceae TaxID=425072 RepID=W7TYZ7_9STRA)

HSP 1 Score: 305 bits (781), Expect = 1.300e-97
Identity = 149/200 (74.50%), Postives = 174/200 (87.00%), Query Frame = 0
Query:    1 YDDIPVETSGENVPDPISSFEPEMLGEELMLTTKLCGYHKPTPVQKYSIPIGISNRDLMACAQTGSGKTAGFLFPTLITLLRRGGPQYPEGRRKS----YPVALVLAPTRELASQIQDEARRFCYRSGIAPVVIYGGADVRSQVRELERGCDLLVATPGRLVDLIERGRISLCCIQFLVLDEADRMLDMGFEPQIRRIVE 196
            YDDIPVETSGE  P+PI+SF  +M+G +LM    LC Y KPTPVQKYS+PIG+++RDLMACAQTGSGKTAGFLFPT++++LR+G P+ P G R S    YP+ALVLAPTRELASQI DEA++FCY +G+ PVVIYGGA+VR+Q+RELERGCDLLVATPGRLVDLIER RISL  I+FL+LDEADRMLDMGFEPQIRRIVE
Sbjct:  192 YDDIPVETSGEGCPEPIASFTEDMVGPQLMTNLALCNYSKPTPVQKYSVPIGLADRDLMACAQTGSGKTAGFLFPTIVSMLRQGAPEPPRGGRSSGRKVYPMALVLAPTRELASQIFDEAQKFCYCTGVRPVVIYGGAEVRNQLRELERGCDLLVATPGRLVDLIERDRISLLSIRFLILDEADRMLDMGFEPQIRRIVE 391          
BLAST of mRNA_H-elongata_contig111778.957.1 vs. uniprot
Match: A0A7S2AA77_TRICV (RNA helicase (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2AA77_TRICV)

HSP 1 Score: 298 bits (764), Expect = 4.940e-97
Identity = 145/197 (73.60%), Postives = 172/197 (87.31%), Query Frame = 0
Query:    1 YDDIPVETSGENVPDPISSFEPEMLGEELMLTTKLCGYHKPTPVQKYSIPIGISNRDLMACAQTGSGKTAGFLFPTLITLLRRGGPQ-YPEGRRKSYPVALVLAPTRELASQIQDEARRFCYRSGIAPVVIYGGADVRSQVRELERGCDLLVATPGRLVDLIERGRISLCCIQFLVLDEADRMLDMGFEPQIRRIVE 196
            YDDIPVETSG +VP+PI  +  E +GE+LM   +LCGY KPTPVQKYS+PIG +NRDLMACAQTGSGKTAGFLFP L+++++ GG +    GRR+SYP AL+LAPTRELASQI +EA+RF YR+GIA VV+YGGA+VR Q+R++ERGCDLLVATPGRLVDLIERGR+S+  I+FLVLDEADRMLDMGFEPQIRRIVE
Sbjct:   60 YDDIPVETSGADVPEPIEVYTEETIGEDLMRNVQLCGYSKPTPVQKYSVPIGTANRDLMACAQTGSGKTAGFLFPVLMSMIKNGGSEPLDHGRRRSYPEALLLAPTRELASQIHEEAKRFTYRTGIASVVVYGGAEVREQLRQIERGCDLLVATPGRLVDLIERGRVSMENIKFLVLDEADRMLDMGFEPQIRRIVE 256          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig111778.957.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LH21_ECTSI4.450e-11991.88RNA helicase n=1 Tax=Ectocarpus siliculosus TaxID=... [more]
A0A6H5JCH1_9PHAE2.600e-11891.88RNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
A0A835ZB12_9STRA2.090e-10781.50RNA helicase n=1 Tax=Tribonema minus TaxID=303371 ... [more]
A0A836CEH0_9STRA7.840e-10072.49P-loop containing nucleoside triphosphate hydrolas... [more]
A0A662XJH5_9STRA7.910e-10075.00RNA helicase (Fragment) n=1 Tax=Nothophytophthora ... [more]
A0A7S3XUS5_HETAK7.990e-10076.38Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A7S2V445_9STRA1.760e-9875.38RNA helicase (Fragment) n=1 Tax=Fibrocapsa japonic... [more]
H3G780_PHYRM4.580e-9875.00RNA helicase n=3 Tax=Phytophthora TaxID=4783 RepID... [more]
W7TYZ7_9STRA1.300e-9774.50RNA helicase n=4 Tax=Monodopsidaceae TaxID=425072 ... [more]
A0A7S2AA77_TRICV4.940e-9773.60RNA helicase (Fragment) n=1 Tax=Trieres chinensis ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014001Helicase superfamily 1/2, ATP-binding domainSMARTSM00487ultradead3coord: 37..196
e-value: 8.0E-34
score: 128.4
IPR014001Helicase superfamily 1/2, ATP-binding domainPROSITEPS51192HELICASE_ATP_BIND_1coord: 49..196
score: 23.304
NoneNo IPR availableGENE3D3.40.50.300coord: 1..196
e-value: 5.6E-66
score: 224.3
NoneNo IPR availablePANTHERPTHR24031:SF573coord: 1..196
NoneNo IPR availablePANTHERPTHR24031RNA HELICASEcoord: 1..196
IPR011545DEAD/DEAH box helicase domainPFAMPF00270DEADcoord: 42..195
e-value: 8.3E-42
score: 142.9
IPR000629ATP-dependent RNA helicase DEAD-box, conserved sitePROSITEPS00039DEAD_ATP_HELICASEcoord: 175..183
IPR014014RNA helicase, DEAD-box type, Q motifPROSITEPS51195Q_MOTIFcoord: 18..46
score: 8.506
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 3..195

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig111778contigH-elongata_contig111778:96..1692 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig111778.957.1mRNA_H-elongata_contig111778.957.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig111778 96..1692 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig111778.957.1 ID=prot_H-elongata_contig111778.957.1|Name=mRNA_H-elongata_contig111778.957.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=196bp
YDDIPVETSGENVPDPISSFEPEMLGEELMLTTKLCGYHKPTPVQKYSIP
IGISNRDLMACAQTGSGKTAGFLFPTLITLLRRGGPQYPEGRRKSYPVAL
VLAPTRELASQIQDEARRFCYRSGIAPVVIYGGADVRSQVRELERGCDLL
VATPGRLVDLIERGRISLCCIQFLVLDEADRMLDMGFEPQIRRIVE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR014001Helicase_ATP-bd
IPR011545DEAD/DEAH_box_helicase_dom
IPR000629RNA-helicase_DEAD-box_CS
IPR014014RNA_helicase_DEAD_Q_motif
IPR027417P-loop_NTPase