prot_H-elongata_contig109963.807.1 (polypeptide) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig109963.807.1 vs. uniprot
Match: A0A6H5L9Y2_9PHAE (DNA-directed RNA polymerase subunit n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L9Y2_9PHAE) HSP 1 Score: 209 bits (532), Expect = 4.120e-60 Identity = 103/133 (77.44%), Postives = 116/133 (87.22%), Query Frame = 0
Query: 2 SLLAKAEAQELMMVPKNIVSPQSNKPVMGIVQDSLLGVCKMTKRDTFVERDLMMNLLMSIGTWDGKVPAPAILKPRPLWTGKQMFTLICPKVNLSEKGRVHPMPGLGLLNDDSPQVLVLEGELIMGHVDKKTV 134
SL+AKAEAQELMMVP+NIVSPQSNKPVMGIVQDSLLGVCKMTKRDTFVERDL+MNLLM + TWDGKVPAPAILKP+PLWTGKQ+F+LICPKVNL HP G LN+ +VL+ EGEL+MG++DKKTV
Sbjct: 534 SLVAKAEAQELMMVPRNIVSPQSNKPVMGIVQDSLLGVCKMTKRDTFVERDLLMNLLMWVETWDGKVPAPAILKPKPLWTGKQLFSLICPKVNLETSANGHPK-GANPLNNSDTKVLIHEGELMMGNIDKKTV 665
BLAST of mRNA_H-elongata_contig109963.807.1 vs. uniprot
Match: D8LRY3_ECTSI (DNA-directed RNA polymerase subunit n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LRY3_ECTSI) HSP 1 Score: 196 bits (497), Expect = 2.150e-55 Identity = 102/141 (72.34%), Postives = 117/141 (82.98%), Query Frame = 0
Query: 2 SLLAKAEAQELMMVPKNIVSPQSNKPVMGIVQDSLLGVCKMTKRDTFVERDLMMNLLMSIGTWDGKVPAPAILKPRPLWTGKQMFTLICPKVNLSEKGRV--------HPMPGLGLLNDDSPQVLVLEGELIMGHVDKKTV 134
SL+AKAEAQELMMVP+NIVSPQSNKPVMGI DSLLGVCKMTKRDTFVERDL+MNLLM + TWDGKVPAPAILKP+PLWTGKQ+F+LICPKV+ S G+V HP G LN+ +VL+ EGEL+MG++DKKTV
Sbjct: 530 SLVAKAEAQELMMVPRNIVSPQSNKPVMGI--DSLLGVCKMTKRDTFVERDLLMNLLMWVETWDGKVPAPAILKPKPLWTGKQLFSLICPKVHGSRTGKVNLETSANGHPK-GANPLNNSDTKVLIHEGELMMGNIDKKTV 667
BLAST of mRNA_H-elongata_contig109963.807.1 vs. uniprot
Match: A0A836CHC4_9STRA (DNA-directed RNA polymerase subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHC4_9STRA) HSP 1 Score: 180 bits (456), Expect = 7.100e-50 Identity = 90/133 (67.67%), Postives = 104/133 (78.20%), Query Frame = 0
Query: 2 SLLAKAEAQELMMVPKNIVSPQSNKPVMGIVQDSLLGVCKMTKRDTFVERDLMMNLLMSIGTWDGKVPAPAILKPRPLWTGKQMFTLICPKVNLSEKGRVHPMPGLGLLNDDSPQVLVLEGELIMGHVDKKTV 134
S++AKAE QELM VP+NIVSPQSNKPVMGIVQDSLL VCKMTKRD F+E+DL+M +LM + W+G VPAPAI KPRPLWTGKQ+F++ICP VN HP G LN +VLV +GELIMG VDKKTV
Sbjct: 525 SVVAKAEVQELMSVPRNIVSPQSNKPVMGIVQDSLLAVCKMTKRDVFIEKDLLMCVLMVVDNWNGLVPAPAIYKPRPLWTGKQLFSVICPDVNFRTTANGHPK-GANELNASDTEVLVHQGELIMGIVDKKTV 656
BLAST of mRNA_H-elongata_contig109963.807.1 vs. uniprot
Match: D8UWF5_9FLOR (DNA-directed RNA polymerase (Fragment) n=2 Tax=Rhodymeniophycidae TaxID=2045261 RepID=D8UWF5_9FLOR) HSP 1 Score: 160 bits (405), Expect = 1.120e-45 Identity = 79/129 (61.24%), Postives = 95/129 (73.64%), Query Frame = 0
Query: 6 KAEAQELMMVPKNIVSPQSNKPVMGIVQDSLLGVCKMTKRDTFVERDLMMNLLMSIGTWDGKVPAPAILKPRPLWTGKQMFTLICPKVNLSEKGRVHPMPGLGLLNDDSPQVLVLEGELIMGHVDKKTV 134
+AE QELM+VP IVSPQ NKPVMGIVQD+LLG T+RDTF+ERDLMMNLL+ +G WDG +P PAI KPRPLWTGKQ+F+L+ PKVNL HP ++ +V + +GELI G VDKKTV
Sbjct: 21 RAEVQELMLVPHCIVSPQGNKPVMGIVQDTLLGCMLFTQRDTFLERDLMMNLLLHVGDWDGVIPEPAIYKPRPLWTGKQIFSLVLPKVNLIRYNLTHPDEEKTDISPGDTKVYISQGELICGIVDKKTV 149
BLAST of mRNA_H-elongata_contig109963.807.1 vs. uniprot
Match: D8UWF4_9FLOR (DNA-directed RNA polymerase (Fragment) n=1 Tax=Antithamnion nipponicum TaxID=179279 RepID=D8UWF4_9FLOR) HSP 1 Score: 159 bits (403), Expect = 2.230e-45 Identity = 77/129 (59.69%), Postives = 94/129 (72.87%), Query Frame = 0
Query: 6 KAEAQELMMVPKNIVSPQSNKPVMGIVQDSLLGVCKMTKRDTFVERDLMMNLLMSIGTWDGKVPAPAILKPRPLWTGKQMFTLICPKVNLSEKGRVHPMPGLGLLNDDSPQVLVLEGELIMGHVDKKTV 134
+AE ELM+VP NIVSPQ NKPVMGIVQD+LLG T+RDTF+ RDLMMN+LM +G WDG +P PAI KP PLWTGKQ+F+LI PKVNL+ HP + ++ +V + GELI G VDK+TV
Sbjct: 21 RAEVMELMLVPHNIVSPQGNKPVMGIVQDTLLGCMLFTQRDTFLRRDLMMNMLMHVGDWDGVIPEPAIYKPEPLWTGKQIFSLILPKVNLTRLANPHPDGEVSDISPGDTKVYISRGELICGIVDKRTV 149
BLAST of mRNA_H-elongata_contig109963.807.1 vs. uniprot
Match: D8UWG6_9FLOR (DNA-directed RNA polymerase (Fragment) n=8 Tax=Rhodomelaceae TaxID=2803 RepID=D8UWG6_9FLOR) HSP 1 Score: 157 bits (398), Expect = 1.250e-44 Identity = 77/129 (59.69%), Postives = 97/129 (75.19%), Query Frame = 0
Query: 6 KAEAQELMMVPKNIVSPQSNKPVMGIVQDSLLGVCKMTKRDTFVERDLMMNLLMSIGTWDGKVPAPAILKPRPLWTGKQMFTLICPKVNLSEKGRVHPMPGLGLLNDDSPQVLVLEGELIMGHVDKKTV 134
+AE QELM+VP +VSPQSNKPVMGI+QD+LLG +T+RDTF+ERDL+MNLLM +G WDG VP PAILKP+PLWTGKQ+F+LI PKVN+S H ++ +V++ G L+ G VDKKTV
Sbjct: 21 RAEVQELMLVPHCVVSPQSNKPVMGIIQDTLLGCMLLTQRDTFIERDLVMNLLMHVGGWDGVVPQPAILKPQPLWTGKQIFSLILPKVNISRTNITHGDADDSPMSVSDTKVVISSGILLCGIVDKKTV 149
BLAST of mRNA_H-elongata_contig109963.807.1 vs. uniprot
Match: D8UWG1_9FLOR (DNA-directed RNA polymerase (Fragment) n=1 Tax=Marionella schmitziana TaxID=756402 RepID=D8UWG1_9FLOR) HSP 1 Score: 157 bits (398), Expect = 1.250e-44 Identity = 78/129 (60.47%), Postives = 94/129 (72.87%), Query Frame = 0
Query: 6 KAEAQELMMVPKNIVSPQSNKPVMGIVQDSLLGVCKMTKRDTFVERDLMMNLLMSIGTWDGKVPAPAILKPRPLWTGKQMFTLICPKVNLSEKGRVHPMPGLGLLNDDSPQVLVLEGELIMGHVDKKTV 134
+AE QELM+VP IVSPQSNKPVMGI+QD+LLG T+RDTF+ERD +MN+LM +G WDG VP PAILKPRPLWTGKQ+F+LI P VNL+ HP ++ V + GEL+ G VDKKTV
Sbjct: 21 RAEVQELMLVPHCIVSPQSNKPVMGIIQDTLLGCMLFTQRDTFLERDFVMNMLMHVGDWDGTVPHPAILKPRPLWTGKQIFSLILPPVNLTRTNITHPDEEDTPMSPGDTLVYISNGELVCGIVDKKTV 149
BLAST of mRNA_H-elongata_contig109963.807.1 vs. uniprot
Match: D8UWF3_9FLOR (DNA-directed RNA polymerase (Fragment) n=1 Tax=Acrothamnion preissii TaxID=756384 RepID=D8UWF3_9FLOR) HSP 1 Score: 157 bits (398), Expect = 1.250e-44 Identity = 77/129 (59.69%), Postives = 94/129 (72.87%), Query Frame = 0
Query: 6 KAEAQELMMVPKNIVSPQSNKPVMGIVQDSLLGVCKMTKRDTFVERDLMMNLLMSIGTWDGKVPAPAILKPRPLWTGKQMFTLICPKVNLSEKGRVHPMPGLGLLNDDSPQVLVLEGELIMGHVDKKTV 134
+AE QELM+VP IVSPQ NKPVMGIVQD+LLG T+RDTF+ERDLMMN+LM +G WDG +P PAILKPRPLWTGKQ+F+LI P +NL HP ++ +V + +G L+ G VDKKTV
Sbjct: 21 RAEVQELMLVPHCIVSPQGNKPVMGIVQDTLLGCMLFTQRDTFIERDLMMNMLMHVGDWDGIIPEPAILKPRPLWTGKQIFSLILPPINLIRFNITHPDEEKTDMSPGDTKVFISKGHLVCGIVDKKTV 149
BLAST of mRNA_H-elongata_contig109963.807.1 vs. uniprot
Match: D8UWH2_9FLOR (DNA-directed RNA polymerase (Fragment) n=4 Tax=Ceramiaceae TaxID=31377 RepID=D8UWH2_9FLOR) HSP 1 Score: 156 bits (395), Expect = 3.490e-44 Identity = 75/129 (58.14%), Postives = 93/129 (72.09%), Query Frame = 0
Query: 6 KAEAQELMMVPKNIVSPQSNKPVMGIVQDSLLGVCKMTKRDTFVERDLMMNLLMSIGTWDGKVPAPAILKPRPLWTGKQMFTLICPKVNLSEKGRVHPMPGLGLLNDDSPQVLVLEGELIMGHVDKKTV 134
+AE QELM+VP I+SPQ N PVMGI+QD+LLG T+RDTF+ERD +MNLLM +G WDG +P PAILKP+PLWTGKQ+F+LI P VNLS + HP ++ +V + G LI G VDKKTV
Sbjct: 21 RAEVQELMLVPHCIISPQGNSPVMGIIQDTLLGCMLFTQRDTFLERDFVMNLLMHVGDWDGVIPQPAILKPKPLWTGKQIFSLILPDVNLSRLNKTHPDDEKAEISPGDTKVFISRGVLICGIVDKKTV 149
BLAST of mRNA_H-elongata_contig109963.807.1 vs. uniprot
Match: A0A7S2DGX7_9STRA (DNA-directed RNA polymerase (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DGX7_9STRA) HSP 1 Score: 159 bits (402), Expect = 3.720e-44 Identity = 75/131 (57.25%), Postives = 102/131 (77.86%), Query Frame = 0
Query: 5 AKAEAQELMMVPKNIVSPQSNKPVMGIVQDSLLGVCKMTKRDTFVERDLMMNLLMSIGTWDGKVPAPAILKPRPLWTGKQMFTLICPKVNLSEKGRVHPMPGL-GLLNDDSPQVLVLEGELIMGHVDKKTV 134
A+AEA++LM+V + IVSPQSNKPVMGIVQDSL+ V ++TKR TF+E+D+ N LM + W+GK+PAPAI+KP+ LWTGKQ+F++ICPK+NL K P + LN +VL+L+G+L+MG +DKKTV
Sbjct: 104 ARAEAEQLMLVSRLIVSPQSNKPVMGIVQDSLIAVQRLTKRSTFIEKDVFFNTLMWVKKWNGKIPAPAIVKPKALWTGKQVFSMICPKINLRSKNNAFPKGNVPSTLNLYDGEVLILDGQLVMGIIDKKTV 234 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig109963.807.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-elongata_contig109963.807.1 ID=prot_H-elongata_contig109963.807.1|Name=mRNA_H-elongata_contig109963.807.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=134bpback to top |