prot_H-elongata_contig109409.765.1 (polypeptide) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig109409.765.1 vs. uniprot
Match: D8LC63_ECTSI (U6 snRNA-associated Sm-like protein LSm2 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC63_ECTSI) HSP 1 Score: 104 bits (259), Expect = 6.250e-28 Identity = 52/53 (98.11%), Postives = 52/53 (98.11%), Query Frame = 0
Query: 2 LFYSFFKTLVGKEIAVELKNDVALTGTLHSVDQYLNVKLIDVQVVDAERYPQL 54
LFYSFFKTLVGKEIAVELKNDVALTGTLHSVDQYLNVKL DVQVVDAERYPQL
Sbjct: 2 LFYSFFKTLVGKEIAVELKNDVALTGTLHSVDQYLNVKLTDVQVVDAERYPQL 54
BLAST of mRNA_H-elongata_contig109409.765.1 vs. uniprot
Match: A0A7S3PVL2_9STRA (U6 snRNA-associated Sm-like protein LSm2 n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3PVL2_9STRA) HSP 1 Score: 98.6 bits (244), Expect = 1.740e-25 Identity = 48/57 (84.21%), Postives = 53/57 (92.98%), Query Frame = 0
Query: 1 QLFYSFFKTLVGKEIAVELKNDVALTGTLHSVDQYLNVKLIDVQVVDAERYPQLVRL 57
QLFYSFFKTLVGKE+AVELKNDV LTGTLHSVDQYLNVKL +VQVVD ++YPQL+ L
Sbjct: 12 QLFYSFFKTLVGKEVAVELKNDVVLTGTLHSVDQYLNVKLNNVQVVDKQKYPQLLAL 68
BLAST of mRNA_H-elongata_contig109409.765.1 vs. uniprot
Match: A0A8J9SEU0_PHATR (Hypothetical protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=A0A8J9SEU0_PHATR) HSP 1 Score: 97.4 bits (241), Expect = 3.880e-25 Identity = 48/57 (84.21%), Postives = 51/57 (89.47%), Query Frame = 0
Query: 1 QLFYSFFKTLVGKEIAVELKNDVALTGTLHSVDQYLNVKLIDVQVVDAERYPQLVRL 57
Q+F SFFKTLVGKE+AVELKNDV LTGTLHSVDQYLN+KLI VQVV ERYPQLV L
Sbjct: 1 QIFLSFFKTLVGKEVAVELKNDVVLTGTLHSVDQYLNIKLIHVQVVQPERYPQLVAL 57
BLAST of mRNA_H-elongata_contig109409.765.1 vs. uniprot
Match: A0A7S2U7M8_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2U7M8_9STRA) HSP 1 Score: 98.6 bits (244), Expect = 3.910e-25 Identity = 48/56 (85.71%), Postives = 52/56 (92.86%), Query Frame = 0
Query: 2 LFYSFFKTLVGKEIAVELKNDVALTGTLHSVDQYLNVKLIDVQVVDAERYPQLVRL 57
LFYSFFKTLVGKE+A+ELKNDV LTGTLHSVDQYLNVKL DVQVV+ E+YPQLV L
Sbjct: 39 LFYSFFKTLVGKEVAIELKNDVVLTGTLHSVDQYLNVKLTDVQVVNKEQYPQLVPL 94
BLAST of mRNA_H-elongata_contig109409.765.1 vs. uniprot
Match: A0A6U3SK19_9STRA (U6 snRNA-associated Sm-like protein LSm2 n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A6U3SK19_9STRA) HSP 1 Score: 97.1 bits (240), Expect = 6.890e-25 Identity = 47/52 (90.38%), Postives = 50/52 (96.15%), Query Frame = 0
Query: 3 FYSFFKTLVGKEIAVELKNDVALTGTLHSVDQYLNVKLIDVQVVDAERYPQL 54
F SFFKTL+GKEIAVELKNDVALTGTLHSVDQYLN+KL DVQVVDAER+PQL
Sbjct: 6 FNSFFKTLIGKEIAVELKNDVALTGTLHSVDQYLNIKLTDVQVVDAERFPQL 57
BLAST of mRNA_H-elongata_contig109409.765.1 vs. uniprot
Match: A0A8J2SX90_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SX90_9STRA) HSP 1 Score: 96.3 bits (238), Expect = 9.650e-25 Identity = 46/54 (85.19%), Postives = 51/54 (94.44%), Query Frame = 0
Query: 2 LFYSFFKTLVGKEIAVELKNDVALTGTLHSVDQYLNVKLIDVQVVDAERYPQLV 55
LFYS FKTLVGKEIAVELKNDVALTGTLHS+DQYLN+KL+D +VVDA R+PQLV
Sbjct: 2 LFYSMFKTLVGKEIAVELKNDVALTGTLHSIDQYLNIKLLDARVVDAARHPQLV 55
BLAST of mRNA_H-elongata_contig109409.765.1 vs. uniprot
Match: A0A7S3PVB5_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3PVB5_9STRA) HSP 1 Score: 96.7 bits (239), Expect = 2.370e-24 Identity = 47/56 (83.93%), Postives = 52/56 (92.86%), Query Frame = 0
Query: 2 LFYSFFKTLVGKEIAVELKNDVALTGTLHSVDQYLNVKLIDVQVVDAERYPQLVRL 57
LFYSFFKTLVGKE+AVELKNDV LTGTLHSVDQYLNVKL +VQVVD ++YPQL+ L
Sbjct: 44 LFYSFFKTLVGKEVAVELKNDVVLTGTLHSVDQYLNVKLNNVQVVDKQKYPQLLAL 99
BLAST of mRNA_H-elongata_contig109409.765.1 vs. uniprot
Match: A0A835YRK1_9STRA (U6 snRNA-associated Sm-like protein LSm2 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRK1_9STRA) HSP 1 Score: 95.1 bits (235), Expect = 3.010e-24 Identity = 46/53 (86.79%), Postives = 50/53 (94.34%), Query Frame = 0
Query: 2 LFYSFFKTLVGKEIAVELKNDVALTGTLHSVDQYLNVKLIDVQVVDAERYPQL 54
LFYSFFKTLVGKE+AVELKNDV+LTGTLHSVDQYLNVKL V+VVD ER+PQL
Sbjct: 2 LFYSFFKTLVGKEVAVELKNDVSLTGTLHSVDQYLNVKLTGVKVVDEERFPQL 54
BLAST of mRNA_H-elongata_contig109409.765.1 vs. uniprot
Match: A0A4D9DC94_9STRA (U6 snRNA-associated Sm-like protein LSm2 n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DC94_9STRA) HSP 1 Score: 94.4 bits (233), Expect = 6.060e-24 Identity = 47/53 (88.68%), Postives = 48/53 (90.57%), Query Frame = 0
Query: 2 LFYSFFKTLVGKEIAVELKNDVALTGTLHSVDQYLNVKLIDVQVVDAERYPQL 54
LFYSFFKTLVGKE+AVELKNDV LTG LHSVDQYLNVKL DVQVV ERYPQL
Sbjct: 2 LFYSFFKTLVGKEVAVELKNDVELTGKLHSVDQYLNVKLEDVQVVKKERYPQL 54
BLAST of mRNA_H-elongata_contig109409.765.1 vs. uniprot
Match: A0A7S2RW57_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RW57_9STRA) HSP 1 Score: 95.9 bits (237), Expect = 7.290e-24 Identity = 46/52 (88.46%), Postives = 50/52 (96.15%), Query Frame = 0
Query: 3 FYSFFKTLVGKEIAVELKNDVALTGTLHSVDQYLNVKLIDVQVVDAERYPQL 54
F SFFKTL+GKEIAVELKNDVALTGTLHSVDQYLN+KL DVQVVD+ER+PQL
Sbjct: 49 FNSFFKTLIGKEIAVELKNDVALTGTLHSVDQYLNIKLTDVQVVDSERFPQL 100 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig109409.765.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-elongata_contig109409.765.1 ID=prot_H-elongata_contig109409.765.1|Name=mRNA_H-elongata_contig109409.765.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=57bpback to top |