prot_H-elongata_contig108428.688.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig108428.688.1
Unique Nameprot_H-elongata_contig108428.688.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length301
Homology
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BLAST of mRNA_H-elongata_contig108428.688.1 vs. uniprot
Match: D7G7L6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7L6_ECTSI)

HSP 1 Score: 214 bits (545), Expect = 3.830e-59
Identity = 135/300 (45.00%), Postives = 180/300 (60.00%), Query Frame = 0 
Query:    4 KQEVNLAKQTKEVWIKVQLPDSSSAGGGGKAGSVIFIEGWIMAFATKRGATMTEAPDALAAQARFRQQEEATRVLATSGGPAGPSSKEAAPPEKAVKPAAPAPAPSSSLADIGGYLRAVGTLKLREEADSFSIELGTIAAGKLVRVVEASGLWIRVLWQGSSEGWVLTANKRGPLLLPTEGSPADTEQEFNDQEAAASGAGDGISTGDDVTGDEDRPLTGAKPGSLAPS---AQEAAGAVDVRKSMEKTASTSSLPPPPATEKSGKDSAAAVGQFMTSAGPLKIRDEADPYSMDVGTMAK 300
            K+E+N AKQTK+VW++ Q P++++A G  + G    +EGW++AF+TKRG+ + EAP+ALAAQ  F +QE                                   P++  A +GGY+RA G LKLREEADS S+ELGT++ G+LVRV + SGLW+RVL++G S GWVLTANKRG  L P E  PA   +EF  QEA             +  GDEDRPLTGAK GS A S   + ++    +V ++              A   SGK +AA+VGQF+TSAGPLK+R+EADP+S+DV TM K
Sbjct:  397 KEEINEAKQTKDVWVRGQSPNTAAAAGS-RTG---LVEGWLLAFSTKRGSMVAEAPNALAAQHAFEKQEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVPTT--ASVGGYMRAAGQLKLREEADSLSLELGTVSRGELVRVEQTSGLWVRVLYRGDSSGWVLTANKRGASLTPAEAGPAAAAKEFQAQEAXXXXXXXXXXX--NGAGDEDRPLTGAKAGSKAGSTAVSDDSGSRAEVARARSAXXXXXXXXXXXAAGSSGKGNAASVGQFLTSAGPLKVREEADPFSLDVATMEK 688
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BLAST of mRNA_H-elongata_contig108428.688.1 vs. uniprot
Match: A0A6H5L4T0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4T0_9PHAE)

HSP 1 Score: 148 bits (373), Expect = 3.440e-36
Identity = 90/190 (47.37%), Postives = 111/190 (58.42%), Query Frame = 0 
Query:  111 SLADIGGYLRAVGTLKLREEADSFSIELGTIAAGKLVRVVEASGLWIRVLWQGSSEGWVLTANKRGPLLLPTEGSPADTEQEFNDQEAAASGAGDGISTGDDVTGDEDRPLTGAKPGSLAPSAQEAAGAVDVRKSMEKTASTSSLPPPPATEKSGKDSAAAVGQFMTSAGPLKIRDEADPYSMDVGTMAK 300
            + A +GGY+RA G LKLREEADS S+ELGT++ G+LV+V + SGLW+RVL++G S GWVLTANKRG  L P E   A   +EF                         RPLTGA+ GS A S                       PP  A   SGK +AA+VGQFMTSAGPLK+R++ADP+S+DV TM K
Sbjct:   59 TTASVGGYMRAAGQLKLREEADSLSLELGTVSRGQLVKVEQTSGLWVRVLYRGDSSGWVLTANKRGASLTPAETGSAAAAKEFQ-AXXXXXXXXXXXXXXXXXXXXXXRPLTGARAGSTAVSXXXXXXXXXXXXXXXXXXXXXXXPPV-AAGSSGKGNAASVGQFMTSAGPLKVREDADPFSLDVATMEK 246
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig108428.688.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G7L6_ECTSI3.830e-5945.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L4T0_9PHAE3.440e-3647.37Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003646SH3-like domain, bacterial-typePFAMPF08239SH3_3coord: 124..171
e-value: 3.3E-7
score: 30.5

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig108428contigH-elongata_contig108428:338..2218 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig108428.688.1mRNA_H-elongata_contig108428.688.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig108428 338..2218 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig108428.688.1 ID=prot_H-elongata_contig108428.688.1|Name=mRNA_H-elongata_contig108428.688.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=301bp
MGAKQEVNLAKQTKEVWIKVQLPDSSSAGGGGKAGSVIFIEGWIMAFATK
RGATMTEAPDALAAQARFRQQEEATRVLATSGGPAGPSSKEAAPPEKAVK
PAAPAPAPSSSLADIGGYLRAVGTLKLREEADSFSIELGTIAAGKLVRVV
EASGLWIRVLWQGSSEGWVLTANKRGPLLLPTEGSPADTEQEFNDQEAAA
SGAGDGISTGDDVTGDEDRPLTGAKPGSLAPSAQEAAGAVDVRKSMEKTA
STSSLPPPPATEKSGKDSAAAVGQFMTSAGPLKIRDEADPYSMDVGTMAK
E
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003646SH3-like_bac-type