prot_H-elongata_contig10723.597.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig10723.597.1
Unique Nameprot_H-elongata_contig10723.597.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length435
Homology
BLAST of mRNA_H-elongata_contig10723.597.1 vs. uniprot
Match: D7G8R0_ECTSI (Small Conductance Mechanosensitive Ion channel n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8R0_ECTSI)

HSP 1 Score: 667 bits (1720), Expect = 2.470e-238
Identity = 341/446 (76.46%), Postives = 379/446 (84.98%), Query Frame = 0
Query:    1 VAGIKAAGAKIWGPVTKVVTPRKLFCFILFQVVYARLLRLLYKLQVQTWRVVRKHDPQPYEESVLGFLEPRLRMLSRVLVIAHLLNTAVRVSIASGWNAKPQLAKVLSDLVYCWYAGYFVDEAKRFFLPVWIPTLKADKRKGFIYNRSLSVLTWSICTLTVLEVISSYLRIPITSTLAFGGIGGLAIGLAGKDVLSNFFGGLMLLLAEPFIPGDMVTFQRNGVRCEGRVERVGWYQTRMRGRDTRPTYVPNGMFADTMVTNMDRITHRKFESSFQLRYSDSPKVSEVLQRIKTALKDVPNVDLLSPFRVHLVDFAETGLKITVVCYFATKSFDEFLYLQQLALLEVMRVAQGAGVTMTSVLHVDMTDPSPIS----VGMIHD----NLAQLDSTKLAAREHD----GHSTAAFEQEPLRKINGGLEETSRPTNESGVASRPRGGSV 434
            +AG+KAAGA+ WGP+T VVTP+KLF F+LFQ+VY RLLRLLY+LQVQ WR+VRKHDPQPYE+SVLGF+EPRLR LSR LV+A+ L + VRV IASGWNA PQLAKVLSD+VYCWYAGYFVDEAKRFFLPVWIP+LKADKRKGFIYNRSLSVLTWSIC LTV EVIS+YLRIPITSTLAFGGIGGLAIGLAGKDVLSNFFGGLMLLLAEPFIPGDMVTFQR GVRCEGRVERVGWYQTR+RGRDTRPTYVPNGMF+DTMVTNMDRITHRKFESSFQLRY+D+PKV+E+LQ IKTALKDVPN+DLLSPFRVHLVDFAE+GLKI VVCYFATKSFDEFLYLQQ+ALLEV RV QGA  TMTSVL+VDM +P+PI      GMI+      +AQ    K+ A   D    G   A+ E++  R ING          +S    +PRGG+V
Sbjct:   14 IAGLKAAGARFWGPLTNVVTPQKLFLFLLFQIVYRRLLRLLYRLQVQVWRLVRKHDPQPYEQSVLGFVEPRLRTLSRTLVVAYALKSGVRVLIASGWNANPQLAKVLSDVVYCWYAGYFVDEAKRFFLPVWIPSLKADKRKGFIYNRSLSVLTWSICLLTVSEVISAYLRIPITSTLAFGGIGGLAIGLAGKDVLSNFFGGLMLLLAEPFIPGDMVTFQRGGVRCEGRVERVGWYQTRLRGRDTRPTYVPNGMFSDTMVTNMDRITHRKFESSFQLRYADAPKVAEILQGIKTALKDVPNIDLLSPFRVHLVDFAESGLKINVVCYFATKSFDEFLYLQQVALLEVTRVVQGASATMTSVLYVDMNNPAPIGKVPLAGMINSAQNKGVAQSGLPKVVAAPKDLNPKGAEGASIEEDGPRPINGTGVSGGSSVQKSRRVKKPRGGTV 459          
BLAST of mRNA_H-elongata_contig10723.597.1 vs. uniprot
Match: A0A4D9D8J2_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D8J2_9STRA)

HSP 1 Score: 355 bits (911), Expect = 9.000e-115
Identity = 172/337 (51.04%), Postives = 236/337 (70.03%), Query Frame = 0
Query:   19 VTPRKLFCFILFQVVYARLLRLLYKLQVQTW-RVVRKHDPQPYEESVLGFLEPRLRMLSRVLVIAHLLNTAVRVSIASGWNAKPQLAKVLSDLVYCWYAGYFVDEAKRFFLPVWIPTLKADKRKGFIYNRSLSVLTWSICTLTVLEVISSYLRIPITSTLAFGGIGGLAIGLAGKDVLSNFFGGLMLLLAEPFIPGDMVTFQRNGVRCEGRVERVGWYQTRMRGRDTRPTYVPNGMFADTMVTNMDRITHRKFESSFQLRYSDSPKVSEVLQRIKTALKDVPNVDLLSPFRVHLVDFAETGLKITVVCYFATKSFDEFLYLQQLALLEVMRVAQGAG 354
            + P  L  F+  +++Y +  R L+      W R     +P+ YE+SVLGF+EP+L  L+  + + +++N  + + I  GW  +   A++++ L+Y  Y  YFV+E K+ +L  W+P+L+ D+R+ +I +RS SV+ W +   + +E IS++L+IP++STLAFGGIGGLA GLA KDV+SNFFGG+MLL  EPF PGDMV+F   G   EG+VERVG+YQTR+RGRDTRPTYVPN +F DTMVTNMDRITHR+FE+SF LR+ D   + EV+  IK AL+ +P VD+LSPFRVH   F    L +T  CYFATKS DE+LYLQQLAL+E+ RV    G
Sbjct:   10 INPSDLLLFVTTRLLYRKACRALHAFHHFLWKRAGILDEPRVYEDSVLGFMEPKLGTLTSFIGVTYVINVVLSLLIDIGWRVRADSARLMASLLYIAYGAYFVNEVKKEYLTTWVPSLQEDRRRSYIIDRSSSVVLWILAIFSCIECISAFLKIPLSSTLAFGGIGGLAFGLASKDVVSNFFGGVMLLFTEPFTPGDMVSFTTRGTHYEGKVERVGFYQTRLRGRDTRPTYVPNSVFVDTMVTNMDRITHRRFEASFSLRFQDFETLPEVILEIKKALRVLPKVDVLSPFRVHFTQFGSYCLSLTASCYFATKSLDEYLYLQQLALMEITRVVTECG 346          
BLAST of mRNA_H-elongata_contig10723.597.1 vs. uniprot
Match: W7UBI9_9STRA (Small-conductance mechanosensitive channel n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7UBI9_9STRA)

HSP 1 Score: 355 bits (912), Expect = 1.270e-112
Identity = 172/337 (51.04%), Postives = 236/337 (70.03%), Query Frame = 0
Query:   19 VTPRKLFCFILFQVVYARLLRLLYKLQVQTW-RVVRKHDPQPYEESVLGFLEPRLRMLSRVLVIAHLLNTAVRVSIASGWNAKPQLAKVLSDLVYCWYAGYFVDEAKRFFLPVWIPTLKADKRKGFIYNRSLSVLTWSICTLTVLEVISSYLRIPITSTLAFGGIGGLAIGLAGKDVLSNFFGGLMLLLAEPFIPGDMVTFQRNGVRCEGRVERVGWYQTRMRGRDTRPTYVPNGMFADTMVTNMDRITHRKFESSFQLRYSDSPKVSEVLQRIKTALKDVPNVDLLSPFRVHLVDFAETGLKITVVCYFATKSFDEFLYLQQLALLEVMRVAQGAG 354
            + P  L  F+  +++Y +  R L+      W R     +P+ YE+SVLGF+EP+L  L+  + + +++N  + + I  GW  +   A++++ L+Y  Y  YFV+E K+ +L  W+P+L+ D+R+ +I +RS SV+ W +   + +E IS++L+IP++STLAFGGIGGLA GLA KDV+SNFFGG+MLL  EPF PGDMV+F   G   EG+VERVG+YQTR+RGRDTRPTYVPN +F DTMVTNMDRITHR+FE+SF LR+ D   + EV+  IK AL+ +P VD+LSPFRVH   F    L +T  CYFATKS DE+LYLQQLAL+E+ RV    G
Sbjct:  200 INPSDLLLFVTTRLLYRKACRALHAFHHFLWKRAGIMDEPRVYEDSVLGFMEPKLGTLTSFIGVTYVINVVLSLLIDIGWRVRADSARLMASLLYIAYGAYFVNEVKKEYLTTWVPSLQEDRRRSYIIDRSSSVVLWILAIFSCIECISAFLKIPLSSTLAFGGIGGLAFGLASKDVVSNFFGGVMLLFTEPFTPGDMVSFTTRGTHYEGKVERVGFYQTRLRGRDTRPTYVPNSVFVDTMVTNMDRITHRRFEASFSLRFQDFETLPEVILEIKKALRVLPKVDVLSPFRVHFTQFGSYCLSLTASCYFATKSLDEYLYLQQLALMEITRVVTECG 536          
BLAST of mRNA_H-elongata_contig10723.597.1 vs. uniprot
Match: A0A6U0TNP3_9STRA (Hypothetical protein n=2 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A6U0TNP3_9STRA)

HSP 1 Score: 340 bits (872), Expect = 2.820e-108
Identity = 193/433 (44.57%), Postives = 264/433 (60.97%), Query Frame = 0
Query:    2 AGIKAAGAKIWG----PVTKVVTPRKLFCFILFQVVYARLLRLLYKLQVQTWRVVRKHDPQP-YEESVLGFLEPRLRMLSRVLVIAHLLNTAVRVSIASGWNAKPQLAKVLSDLVYCWYAGYFVDEAKRFFLPVWIPTLKADKRKGFIYNRSLSVLTWSICTLTVLEVISSYLRIPITSTLAFGGIGGLAIGLAGKDVLSNFFGGLMLLLAEPFIPGDMVTFQRNGVRCEGRVERVGWYQTRMRGRDTRPTYVPNGMFADTMVTNMDRITHRKFESSFQLRYSDSPKVSEVLQRIKTALKDVPNVDLLSPFRVHLVDFAETGLKITVVCYFATKSFDEFLYLQQLALLEVMRVAQGAGVTMT---SVLHVDMTDPSPISV-GMIHDNLAQLDSTKLAAREHDGHSTAAFEQEPLRKINGGLEETSRPTNESGV 425
            AG  AA   +W     P+  ++ PR L  +++F+  Y+R LRL Y LQ    R+++K  P P Y ++VLGFLEPR   LSR+  + +L+N ++        N +P L ++ + L Y  YAGYF++E +RF  P W P L  DKR+ +I +RS SV  W+I  + +L+ IS++  +P++S+LA GG+GG+AIGLA KDV+SNF GGLMLL+ EPF PGD +TF   G    G+VERVGWYQTR+R RDTRP YVPN  F +TMVTNMDRITHRKFES F ++     +V  +L  IK AL+  P +DLLSPFR +L+     GL+ +V+CYFATKS DEFL LQQ   LEV R  +  G+T       + V   +   + V GM+ D LA+  S     +  +    A   +EP R         + PT E+ V
Sbjct:   62 AGYNAA-LNVWAEVPTPLRVLMRPRDLLAYLIFRTCYSRALRLGYLLQTLLSRLLKKDIPPPAYLQTVLGFLEPRFAQLSRLTGLIYLVNVSISAIGLIDLNIRPGLDRLFTKLAYTAYAGYFLNEVRRFVTPRWFPKLAEDKRRAYIVDRSASVFFWTITIVLLLDQISTFFNVPLSSSLALGGVGGVAIGLASKDVVSNFVGGLMLLITEPFTPGDFITFLYQGQWMIGKVERVGWYQTRIRNRDTRPVYVPNAFFVNTMVTNMDRITHRKFESEFHIQLDSFAQVEGLLDDIKIALQGFPKLDLLSPFRANLIAVESDGLRFSVLCYFATKSLDEFLMLQQKVFLEVGRCVESRGLTWAFPRRTIDVRAREIGSLMVEGMMEDALARQQS---GTQRREIRRIAPVAREPDRTA-------AEPTTEASV 483          
BLAST of mRNA_H-elongata_contig10723.597.1 vs. uniprot
Match: A0A7S0SR49_9STRA (Hypothetical protein (Fragment) n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0SR49_9STRA)

HSP 1 Score: 256 bits (655), Expect = 1.890e-78
Identity = 127/266 (47.74%), Postives = 174/266 (65.41%), Query Frame = 0
Query:   98 NAKPQLAKVLSDLVYCWYAGYFVDEAKRFFLPVWIPTLKADKRKGFIYNRSLSVLTWSICTLTVLEVISSYLRIPITSTLAFGGIGGLAIGLAGKDVLSNFFGGLMLLLAEPFIPGDMVTFQRNGVRCEGRVERVGWYQTRMRGRDTRPTYVPNGMFADTMVTNMDRITHRKFESSFQLRYSDSPKVSEVLQRIKTALKDVPNVDLLS-PFRVHLVDFAETGLKITVVCYFATKSFDEFLYLQQLALLEVMRVAQGAGVTMTSVLH 362
            + KP    +++ + Y  Y   F D  K  FL +++P L A++R+ ++  RS SV+ W +  L   E++S+YL++P++STLAFGG GGLA+GL+ +DV +NF GG++LL  EPF PGDMVTF+       GRVERVGW QTR+RGRDTRPTYVPN  F  T VTNM+RITHRKFE+   LRY D   +S+V+ +IK  L+ +P +D ++ PFR   V      L I V CYF+TKS DEFL LQQ A LE+++       ++    H
Sbjct:   20 SVKPDFHIIVARVSYAIYLTNFFDMFKLKFLNLFLPNLNANRRQSYVVQRSSSVILWVVGVLIACEMVSTYLKVPLSSTLAFGGFGGLALGLSARDVAANFLGGILLLFNEPFTPGDMVTFRSGNTELLGRVERVGWGQTRIRGRDTRPTYVPNSHFVQTAVTNMERITHRKFEAIVPLRYQDHAVMSDVVTKIKEGLRKIPKLDTMTQPFRCSFVKVGSYSLDIEVTCYFSTKSIDEFLPLQQAANLEIIKAVYSCNASLALPTH 285          
BLAST of mRNA_H-elongata_contig10723.597.1 vs. uniprot
Match: A0A6H5L1M0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1M0_9PHAE)

HSP 1 Score: 237 bits (604), Expect = 1.380e-73
Identity = 122/165 (73.94%), Postives = 130/165 (78.79%), Query Frame = 0
Query:  130 VWIPTLKADKRKGFIYNRSLSVLTWSICTLTVLEVISSYLRIPITSTLAFGGIGGLAIGLAGK-------------------------------DVLSNFFGGLMLLLAEPFIPGDMVTFQRNGVRCEGRVERVGWYQTRMRGRDTRPTYVPNGMFADTMVTNMD 263
            +WIP+LKADKRKGFIYNRSLSVLTWSIC LTV EVIS+YLRIPITSTLAFGGIGGLAIGLAGK                               DVLSNFFGGLMLLLAEPFIPGDMVTFQR GVRCEGRVERVGWYQTR+RGRDTRPTYVPNGMF+DTMV++ +
Sbjct:    1 MWIPSLKADKRKGFIYNRSLSVLTWSICLLTVSEVISAYLRIPITSTLAFGGIGGLAIGLAGKEALFVACVGIHGPRSPPLRSSLAVVCSVAKKDVLSNFFGGLMLLLAEPFIPGDMVTFQRGGVRCEGRVERVGWYQTRLRGRDTRPTYVPNGMFSDTMVSSRE 165          
BLAST of mRNA_H-elongata_contig10723.597.1 vs. uniprot
Match: A0A835ZID6_9STRA (Mechanosensitive ion channel-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZID6_9STRA)

HSP 1 Score: 253 bits (645), Expect = 1.510e-72
Identity = 134/275 (48.73%), Postives = 177/275 (64.36%), Query Frame = 0
Query:   15 VTKVVTPRKLFCFILFQVVYARLLRLLYKLQVQTWRVVRKHDP-------QPYEESVLGFLEPRLRMLSRVLVIAHLLNTAVRVSIASGWNAKPQLAKVLSDLVYCWYAGYFVDEAKR----------------FFLPVWIPTLKADKRKGFIYNRSLSVLTWSICTLTVLEVISSYLRIPITSTLAFGGIGGLAIGLAGKDVLSNFFGGLMLLLAEPFIPGDMVTFQRNGVRCEGRVERVGWYQTRMRGRDTRPTYVPNGMFADTMVTNMDRIT 266
            V  ++ PR L  F+ F +VY + LR++Y LQ +  R +            +P+E+S LGFLEPRLR L+RV+   ++ N A+      G+  +P     +S +V   YAGYF+DE KR                F+LPV  P L+ D RK FIYNR+ SVLTW++  L +L+VIS++L IP+ ST+AFGG GG+A G A K +  NFFGGL LLL+EPF+PGDMV F+  G   EGRVERVGWYQTR+RGRDTRPTY+PN +F   +VTNMDRI+
Sbjct:  205 VRALINPRDLALFVGFYLVYKKALRVIYGLQAKAMRAMASRSGSGAPAAVKPFEQSWLGFLEPRLRSLTRVMAGLYVANGALGGLANLGYRLRPGTQDFVSTVVATLYAGYFIDELKRQQRSRDAFCCLSCAPQFYLPVIWPELQNDMRKAFIYNRTTSVLTWTLVALGLLQVISAFLHIPLASTMAFGGAGGIAFGFAAKGIFENFFGGLTLLLSEPFVPGDMVHFEYGGEVMEGRVERVGWYQTRLRGRDTRPTYIPNNVFLSNLVTNMDRIS 479          
BLAST of mRNA_H-elongata_contig10723.597.1 vs. uniprot
Match: UPI0011848E02 (mechanosensitive ion channel family protein n=1 Tax=Pleionea sediminis TaxID=2569479 RepID=UPI0011848E02)

HSP 1 Score: 149 bits (376), Expect = 3.320e-37
Identity = 88/276 (31.88%), Postives = 150/276 (54.35%), Query Frame = 0
Query:   96 GWNAKPQLAKVLSDLVYCWYAGYFVDEAKRFFLPVWIPTLKADKRKGFIYNRSLSVLTWSICTLTVLEVISSYLRIPITSTLAFGGIGGLAIGLAGKDVLSNFFGGLMLLLAEPFIPGDMVTFQRNGVRCEGRVERVGWYQTRMRGRDTRPTYVPNGMFADTMVTNMDRITHRKFESSFQLRYSDSPKVSEVLQRIKTALKDVPNVDLLSPFRVHLVDFAETGLKITVVCYFATKSFDEFLYLQQLALLEVMRVAQGAGVTM---TSVLHVDMTDP 368
            G N    + +V+   ++ W+   F+ ++++  +   +   + D+R       ++S L     T+TV+ VI   + + I++ LAFGGIGG+AIG A KD+L+NFFGGLM+ L  PF  GD V      +  EG +E +GW QTR+R  D RP YVPN +F +  V N  R+T+R+   +  +RY D   +  ++ ++   L+   +++      V+   F+ + +   + C+  TK + EF  ++Q  LL++  +   AG  +   TS LHV+M+ P
Sbjct:  104 GQNQAVMINEVILIGLFGWFLTRFIRKSEQHLIAHQVDK-EEDERIDHTTIEAISKLLRVSVTITVVLVILQTIGVSISAVLAFGGIGGIAIGFAAKDLLANFFGGLMIYLDRPFSHGDWVRSPDRNI--EGTIEHIGWRQTRIRTFDKRPLYVPNAVFNNIAVENPSRMTNRRIYETVGIRYDDIGAMKSIVDQVTDMLRSHEDIEQSKTLIVNFNAFSASSIDFFIYCFTKTKDWVEFHAVKQDVLLKIADIIDQAGAEIAFPTSTLHVNMSQP 376          
BLAST of mRNA_H-elongata_contig10723.597.1 vs. uniprot
Match: A0A6L5QRF6_9GAMM (Mechanosensitive ion channel n=1 Tax=Kangiella sp. HZ709 TaxID=2666328 RepID=A0A6L5QRF6_9GAMM)

HSP 1 Score: 149 bits (375), Expect = 3.390e-37
Identity = 84/233 (36.05%), Postives = 130/233 (55.79%), Query Frame = 0
Query:  135 LKADKRKGFIYNRSLSVLTWSICTLTVLEVISSYLRIPITSTLAFGGIGGLAIGLAGKDVLSNFFGGLMLLLAEPFIPGDMVTFQRNGVRCEGRVERVGWYQTRMRGRDTRPTYVPNGMFADTMVTNMDRITHRKFESSFQLRYSDSPKVSEVLQRIKTALKDVPNVDLLSPFRVHLVDFAETGLKITVVCYFATKSFDEFLYLQQLALLEVMRVAQGAGVTM---TSVLHVD 364
            +K D+      ++ L ++   I TL + ++    L IPI   L FGGIGG+A+G A KD+L+NFFGGLM+ L +PF  GD +      +  EG VE +GW QTR+R  D RP YVPN  F +  V N  R+T+R+   S  LRY D  KV  ++ ++KT L+    +D  +   V+   FA + L   +  +  T+ + E+  ++Q  LL++M + +  G  +   TS LH++
Sbjct:  135 VKLDETGVLAVSKLLRLIVIVISTLIIFQL----LNIPIAGVLTFGGIGGVAVGFAAKDLLANFFGGLMIFLDKPFKVGDWIRSPDKEI--EGTVENIGWRQTRIRTFDKRPLYVPNATFTNISVENPSRMTNRRINESIGLRYDDWQKVETIVGKVKTMLQQHEEIDQTATLMVNFDKFAASSLDFFIYTFTKTRDWAEYHEIKQDVLLKIMNIIEQEGAEIAFPTSTLHMN 361          
BLAST of mRNA_H-elongata_contig10723.597.1 vs. uniprot
Match: A0A3E0DQ00_9GAMM (MscS family membrane protein n=1 Tax=Marinomonas pollencensis TaxID=491954 RepID=A0A3E0DQ00_9GAMM)

HSP 1 Score: 147 bits (371), Expect = 1.320e-36
Identity = 94/297 (31.65%), Postives = 147/297 (49.49%), Query Frame = 0
Query:   89 VRVSIA---SGWNAKPQLAKVLSDL-------VYCWYAGYFVDEAKRFFLPVWIPTLKADKRKGFIYNRSLSVLTWSICTLTVLEVISSYLRIPITSTLAFGGIGGLAIGLAGKDVLSNFFGGLMLLLAEPFIPGDMVTFQRNGVRCEGRVERVGWYQTRMRGRDTRPTYVPNGMFADTMVTNMDRITHRKFESSFQLRYSDSPKVSEVLQRIKTALKDVPNVDLLSPFRVHLVDFAETGLKITVVCYFATKSFDEFLYLQQLALLEVMRVAQGAGVTMTSVLH-VDMTDPSPISVG 374
            V +S+A   SG    P    ++S L       +  W+   F+ EA+         + K  K+       ++S L      +T L VI   L   I+  LAFGG+GG+AIG A KD+LSNFFGGL++ L  PF+ GD +      +  EG VE +GW QTR+R  D RP YVPN  F+   V N  R++HR+   +  +RY D  K+ ++L  +KT + +   +D+     V+   F  + L   +  +  T  +  F  ++Q  L ++M + +  G  +    H V M +  P+S+G
Sbjct:   74 VGISVAAEISGTELDPTFTSIISALRDVGVIALLAWFVLRFIKEAEN----TLTTSSKVAKKVDVTTASAISKLLRVSVIITALLVILQTLGYSISGVLAFGGVGGIAIGFAAKDLLSNFFGGLIVYLDRPFVVGDWIRSPDKNI--EGTVENIGWRQTRIRTFDKRPLYVPNSTFSIISVENPSRMSHRRINETIGVRYDDFSKLPDILAEVKTMIAEHEALDMSQTCMVNFNQFGPSSLDFFIYTFTKTVDWKTFHEVKQDVLFKIMTIIESHGAEVAFPTHTVHMANTEPMSLG 364          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig10723.597.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G8R0_ECTSI2.470e-23876.46Small Conductance Mechanosensitive Ion channel n=1... [more]
A0A4D9D8J2_9STRA9.000e-11551.04Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
W7UBI9_9STRA1.270e-11251.04Small-conductance mechanosensitive channel n=1 Tax... [more]
A0A6U0TNP3_9STRA2.820e-10844.57Hypothetical protein n=2 Tax=Pinguiococcus pyrenoi... [more]
A0A7S0SR49_9STRA1.890e-7847.74Hypothetical protein (Fragment) n=1 Tax=Chromulina... [more]
A0A6H5L1M0_9PHAE1.380e-7373.94Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835ZID6_9STRA1.510e-7248.73Mechanosensitive ion channel-domain-containing pro... [more]
UPI0011848E023.320e-3731.88mechanosensitive ion channel family protein n=1 Ta... [more]
A0A6L5QRF6_9GAMM3.390e-3736.05Mechanosensitive ion channel n=1 Tax=Kangiella sp.... [more]
A0A3E0DQ00_9GAMM1.320e-3631.65MscS family membrane protein n=1 Tax=Marinomonas p... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006685Mechanosensitive ion channel MscSPFAMPF00924MS_channelcoord: 157..355
e-value: 3.1E-37
score: 128.1
NoneNo IPR availablePANTHERPTHR43634:SF2LOW CONDUCTANCE MECHANOSENSITIVE CHANNEL YNAIcoord: 116..355
NoneNo IPR availablePANTHERPTHR43634FAMILY NOT NAMEDcoord: 116..355
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 177..195
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..21
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 196..434
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 22..42
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 149..171
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 172..176
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 43..148
IPR011066Mechanosensitive ion channel MscS, C-terminalSUPERFAMILY82689Mechanosensitive channel protein MscS (YggB), C-terminal domaincoord: 267..356
IPR010920LSM domain superfamilySUPERFAMILY50182Sm-like ribonucleoproteinscoord: 193..262
IPR011014Mechanosensitive ion channel MscS, transmembrane-2SUPERFAMILY82861Mechanosensitive channel protein MscS (YggB), transmembrane regioncoord: 110..191

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig10723contigH-elongata_contig10723:4712..7916 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig10723.597.1mRNA_H-elongata_contig10723.597.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig10723 4712..7916 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig10723.597.1 ID=prot_H-elongata_contig10723.597.1|Name=mRNA_H-elongata_contig10723.597.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=435bp
VAGIKAAGAKIWGPVTKVVTPRKLFCFILFQVVYARLLRLLYKLQVQTWR
VVRKHDPQPYEESVLGFLEPRLRMLSRVLVIAHLLNTAVRVSIASGWNAK
PQLAKVLSDLVYCWYAGYFVDEAKRFFLPVWIPTLKADKRKGFIYNRSLS
VLTWSICTLTVLEVISSYLRIPITSTLAFGGIGGLAIGLAGKDVLSNFFG
GLMLLLAEPFIPGDMVTFQRNGVRCEGRVERVGWYQTRMRGRDTRPTYVP
NGMFADTMVTNMDRITHRKFESSFQLRYSDSPKVSEVLQRIKTALKDVPN
VDLLSPFRVHLVDFAETGLKITVVCYFATKSFDEFLYLQQLALLEVMRVA
QGAGVTMTSVLHVDMTDPSPISVGMIHDNLAQLDSTKLAAREHDGHSTAA
FEQEPLRKINGGLEETSRPTNESGVASRPRGGSV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006685MscS_channel
IPR011066MscC_channel_C
IPR010920LSM_dom_sf
IPR011014MscS_channel_TM-2