prot_H-elongata_contig103485.289.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig103485.289.1
Unique Nameprot_H-elongata_contig103485.289.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length117
Homology
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BLAST of mRNA_H-elongata_contig103485.289.1 vs. uniprot
Match: D7FHD0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHD0_ECTSI)

HSP 1 Score: 110 bits (276), Expect = 1.830e-27
Identity = 50/114 (43.86%), Postives = 78/114 (68.42%), Query Frame = 0 
Query:    1 PVEWNIQDEICDHFALHCTQSMVLLNEEDV-DKADALECAAVADVLVVSEGGFSVASSFLSPHVKILTDKWAPDEMEMKISLDPASTVAGISQSEHKLIQKTLWEYSECSALAS 113
            P+ W++  E CD   LHC+Q +VLLNE    + + +LEC A +D+ + SE  FS A + LS HVK+LTD+W  DE EM ++L+PA+T+AG+  S+ +L++  + +Y ECSA ++
Sbjct:  160 PLYWDVAGETCDDLGLHCSQHVVLLNERTAPESSQSLECIAASDLFIASESKFSRAGAVLSDHVKVLTDRWEMDEEEMMVALNPATTIAGMPDSQRQLLRTLVADYHECSASSA 273
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BLAST of mRNA_H-elongata_contig103485.289.1 vs. uniprot
Match: A0A6H5L6Y9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6Y9_9PHAE)

HSP 1 Score: 110 bits (274), Expect = 2.150e-26
Identity = 49/114 (42.98%), Postives = 78/114 (68.42%), Query Frame = 0 
Query:    1 PVEWNIQDEICDHFALHCTQSMVLLNEEDV-DKADALECAAVADVLVVSEGGFSVASSFLSPHVKILTDKWAPDEMEMKISLDPASTVAGISQSEHKLIQKTLWEYSECSALAS 113
            P+ W++  E CD   LHCTQ +VLLNE    + + +L+C A +D+ + SE  FS A + LS HVK+LTD+W  DE EM ++L+PA+T+AG+  S+ +L++  + +Y ECS+ ++
Sbjct:  265 PLYWDVAGETCDDLGLHCTQHVVLLNERTAPESSQSLDCIAASDLFIASESKFSRAGAVLSDHVKVLTDRWEMDEEEMMVALNPATTIAGMPDSQRQLLRTLVADYHECSSSST 378
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig103485.289.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FHD0_ECTSI1.830e-2743.86Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L6Y9_9PHAE2.150e-2642.98Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig103485contigH-elongata_contig103485:762..2027 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig103485.289.1mRNA_H-elongata_contig103485.289.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig103485 762..2027 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig103485.289.1 ID=prot_H-elongata_contig103485.289.1|Name=mRNA_H-elongata_contig103485.289.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=117bp
PVEWNIQDEICDHFALHCTQSMVLLNEEDVDKADALECAAVADVLVVSEG
GFSVASSFLSPHVKILTDKWAPDEMEMKISLDPASTVAGISQSEHKLIQK
TLWEYSECSALASRRP*
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