prot_H-elongata_contig10269.231.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig10269.231.1
Unique Nameprot_H-elongata_contig10269.231.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length249
Homology
BLAST of mRNA_H-elongata_contig10269.231.1 vs. uniprot
Match: A0A6H5JWI1_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWI1_9PHAE)

HSP 1 Score: 158 bits (400), Expect = 1.280e-43
Identity = 97/224 (43.30%), Postives = 122/224 (54.46%), Query Frame = 0
Query:   77 RQPRDFKPVQVLATALDPRRKMFHGVEYEEKTEVGQLVQNEVVKIALKNRQGKMPGSASSQQ----------------------------------------------------SSVAAPLATVVEDDSSRKRPRGGFMVAAQSAESGTSFRVYLDPLYWWRVRSADFPHLASLAHRVLAIPAMQAESERIFCCAGDIITNNRNKLAPTTVEVLVLLCHLWEMV 248
            RQP  FKPVQVLATALDPR K+ +GV+ +EK +V +LV+ E VKIA++ R  +    ASSQQ                                                    SS    + + V  + +  +   G  +  +  E     +VYLDPL WWRVR ADFPHLA+LA RVLAIPA QAESER+F CAG+I+T NRN LAPTTVE+LVLL H W++V
Sbjct:   70 RQPGGFKPVQVLATALDPRTKILYGVDEDEKADVWKLVEEEAVKIAVETRNSENSQRASSQQGPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQAVGGARTPQLDEGADSSFVRLITSSVRVELTAFKVSTGIKMYEEDKEGA---KVYLDPLDWWRVRCADFPHLANLARRVLAIPATQAESERLFSCAGNIVTKNRNNLAPTTVELLVLLRHSWKIV 290          
BLAST of mRNA_H-elongata_contig10269.231.1 vs. uniprot
Match: A0A6H5L7Y8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7Y8_9PHAE)

HSP 1 Score: 105 bits (263), Expect = 2.540e-22
Identity = 71/161 (44.10%), Postives = 91/161 (56.52%), Query Frame = 0
Query:   33 VTGSLVLSFIYGLRRNLDKTIDNLKEVPVSADADINTAKAEVMP---------------------------RQPRDFKPVQVLATALDPRRKMFHGVEYEEKTEVGQLVQNEVVKIALKNRQGKMPGSASSQQSSVAAP-----LATVVEDDSSRKRPRGG 161
            VTGSLV+ FIY LR +L+  ID+L E+P  +DA++NTA A VMP                           RQP  FKPV VLATALDPR K+ +GV+ +EK +V +LVQ E VKIA++ R  +     SSQQ   AA        +   ++SSRKRPR G
Sbjct:  198 VTGSLVVPFIYDLRNSLEDAIDDLVELPPDSDANVNTAWAAVMPCIKALRDDYIDRWGDGHNILIYKEGPRRQPGGFKPVHVLATALDPRTKIPYGVDEDEKADVWKLVQEEAVKIAVETRNAENSQRTSSQQGPEAAAGPALSSTSAGAEESSRKRPRVG 358          
BLAST of mRNA_H-elongata_contig10269.231.1 vs. uniprot
Match: A0A6H5JPB0_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPB0_9PHAE)

HSP 1 Score: 95.9 bits (237), Expect = 2.170e-20
Identity = 44/60 (73.33%), Postives = 52/60 (86.67%), Query Frame = 0
Query:  189 SADFPHLASLAHRVLAIPAMQAESERIFCCAGDIITNNRNKLAPTTVEVLVLLCHLWEMV 248
            S DFPHLA+LA RVLAIPA QA+SER+F CAG+I+T NRN LAPTTVE+LVLL H W++V
Sbjct:  151 STDFPHLANLARRVLAIPATQAKSERLFSCAGNIVTKNRNNLAPTTVELLVLLRHSWKIV 210          
BLAST of mRNA_H-elongata_contig10269.231.1 vs. uniprot
Match: A0A6H5KVI1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVI1_9PHAE)

HSP 1 Score: 90.9 bits (224), Expect = 1.650e-17
Identity = 73/221 (33.03%), Postives = 105/221 (47.51%), Query Frame = 0
Query:    1 MLTAADWVVLDIILPILEPFMQPQTLLKGRQYVTGSLVLSFIYGLRRNLDKTIDNLKEVPVSADADINTAKAEVMP---------------------------RQPRDFKPVQVLATALDPRRKMFHGVEYEEKTEVGQLVQNEVVKIALKNRQGKMPGSASSQQSSVAAPLATVVEDDSSRKRPRGGFMVAAQSAESGTSFRVYLDPLYW----WRVRSA 190
            +L   DW VL ++ P+L PFM  Q  L+  + VT SLV ++I  LR  LD+ I+ L+     A++ +  AK +++                            RQPR FK  QVLATALDPR K  +G+E  E ++V + V NE VK+A++ +  +   SA +  S +    A        R+R   GF  A  SA  G S +V +  L      WR  SA
Sbjct:  165 LLNEKDWEVLQLVEPLLHPFMTAQKHLEASKGVTVSLVTAYIADLRDELDEAIERLQAYSCPAESIVAEAKKDILRCAPALQTDLSRRWRDGTDVLVYTEGPRRQPRGFKKKQVLATALDPRSKSLYGIEETEHSDVWEAVANEAVKVAIEAKATEDTQSAGASSSPIPVEPAAAAAYQPRRRR---GFATA--SAAHGASSKVPMRALRLQGSRWRASSA 380          
BLAST of mRNA_H-elongata_contig10269.231.1 vs. uniprot
Match: A0A1A8B204_NOTFU (6-phosphofructo-2-kinase/fructose-2, 6-biphosphatase 1 n=2 Tax=Nothobranchius TaxID=28779 RepID=A0A1A8B204_NOTFU)

HSP 1 Score: 72.8 bits (177), Expect = 1.170e-12
Identity = 38/97 (39.18%), Postives = 51/97 (52.58%), Query Frame = 0
Query:  145 LATVVEDDSSRKRPRGGFMVAAQSAESGTSFRVYLDPLYWWRVRSADFPHLASLAHRVLAIPAMQAESERIFCCAGDIITNNRNKLAPTTVEVLVLL 241
            LA VVED+               S     S  V  DP  WW+     FPH+A +A R+L +P     SERIF  AGDI++ NR++LAP +V+ L+ L
Sbjct:   36 LAQVVEDE-------------VASYRLAESIGVDADPFRWWKTNEHKFPHVAKVAKRLLCVPGTSVPSERIFSTAGDIVSANRSRLAPDSVDRLIFL 119          
BLAST of mRNA_H-elongata_contig10269.231.1 vs. uniprot
Match: A0A1A7ZKZ8_NOTFU (Zinc finger, BED domain containing 4 (Fragment) n=1 Tax=Nothobranchius furzeri TaxID=105023 RepID=A0A1A7ZKZ8_NOTFU)

HSP 1 Score: 75.9 bits (185), Expect = 1.510e-12
Identity = 67/269 (24.91%), Postives = 134/269 (49.81%), Query Frame = 0
Query:    2 LTAADWVVLDIILPILEPFMQPQTLLKGRQYVTGSLVLSFIYGLRRNL------DKTIDNLKEVPVSADADINTAKAEVMPRQPRDFKPVQVLATALDPRRKMFH-----GVEYEEKTEVGQLVQNEVVKIALKNRQGKMPGSASSQQSSVAAPLATVVEDDSSRKRPRGGFMVAAQSAESGTSFRVYL---------DPLYWWRVRSADFPHLASLAHRVLAIPAMQAESERIFCCAGDIITNNRNKLAPTTVEVLVLL---CH-LWE 246
            LTA+ W +++    +L P ++  T    ++  T + V+  I  LRR L      D+ +  +K   + A   + T  AEV      + +P+  +AT +DPR K  +      + + + + + ++++ E  ++A +  +   P S + +Q + ++ L +++++    ++P     V+  SA+     R+YL         +PL +W+  +  FP LA++A + L  P    +SER+F    +I+  NRN+L+P  +E+L+ L    H +WE
Sbjct:   34 LTASQWTLMENTAEVLVP-LEELTREVSKETATAADVIPAISALRRVLSREDTTDQGVRTMKRTLLEA---VETRFAEV------EKEPLYSIATLVDPRYKDRYFTKSDHLRFAKDSLIQEVMKMEENRVASEEPEAAEPVSKAPRQGAGSS-LGSILDEILEERQPEAQ-SVSTTSAD--VQVRIYLSEQTIPRKSNPLDYWKTHATQFPSLAAVATKFLCAPCTSVDSERLFSAVSNILDENRNRLSPDKLEMLIFLKKNMHFIWE 288          
BLAST of mRNA_H-elongata_contig10269.231.1 vs. uniprot
Match: A0A6H5JVE5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVE5_9PHAE)

HSP 1 Score: 75.5 bits (184), Expect = 2.570e-12
Identity = 49/112 (43.75%), Postives = 63/112 (56.25%), Query Frame = 0
Query:   55 NLKEVPVSADADINTAKAEVMP---------------------------RQPRDFKPVQVLATALDPRRKMFHGVEYEEKTEVGQLVQNE-VVKIALKNRQGKMPGSASSQQ 138
            +L E+P  +DA++NTA+A VMP                           RQP  FKPVQVLATALDPR K+ HGV+ +EK +V +LVQ E  VKIA++ R  +     SSQQ
Sbjct:  143 DLAELPPDSDANVNTARAAVMPCIKALRDDFINRWGDGRNILNYKEGPRRQPAGFKPVQVLATALDPRTKILHGVDEDEKADVWKLVQEEEAVKIAVETRNAENSQRTSSQQ 254          
BLAST of mRNA_H-elongata_contig10269.231.1 vs. uniprot
Match: A0A1A8MBN7_9TELE (Zinc finger, BED domain containing 4 n=3 Tax=Nothobranchius TaxID=28779 RepID=A0A1A8MBN7_9TELE)

HSP 1 Score: 76.3 bits (186), Expect = 3.270e-12
Identity = 67/269 (24.91%), Postives = 134/269 (49.81%), Query Frame = 0
Query:    2 LTAADWVVLDIILPILEPFMQPQTLLKGRQYVTGSLVLSFIYGLRRNL------DKTIDNLKEVPVSADADINTAKAEVMPRQPRDFKPVQVLATALDPRRKMFH-----GVEYEEKTEVGQLVQNEVVKIALKNRQGKMPGSASSQQSSVAAPLATVVEDDSSRKRPRGGFMVAAQSAESGTSFRVYL---------DPLYWWRVRSADFPHLASLAHRVLAIPAMQAESERIFCCAGDIITNNRNKLAPTTVEVLVLL---CH-LWE 246
            LT++ W +++    +L P ++  T    ++  T + V+  I  LRR L      D+ +  +K   + A   + T  AEV      + +P+  +AT +DPR K  +      + + + + + ++++ E  ++A K  +   P S + +Q + ++ L +++++    ++P     V+  SA+     R+YL         +PL +W+  +  FP LA++A + L  P    +SER+F    +I+  NRN+L+P  +E+L+ L    H +WE
Sbjct:  346 LTSSQWTLMENTAEVLVP-LEELTREVSKETATAADVIPAISALRRVLSREQTTDQGVRTMKRTLLEA---VETRFAEV------EKEPLYSIATLVDPRYKDRYFTKSDHLRFAKDSLIQEVMKMEENRVASKEPEAAEPVSKAPRQGAGSS-LGSILDEILEERQPEAQ-SVSTTSAD--VQVRIYLSEQTIPRKSNPLDYWKTHATQFPSLAAVATKFLCAPCTSVDSERLFSAVSNILDENRNRLSPDKLEMLIFLKKNMHFIWE 600          
BLAST of mRNA_H-elongata_contig10269.231.1 vs. uniprot
Match: A0A1A8PFM2_9TELE (Zinc finger, BED domain containing 4 n=1 Tax=Nothobranchius rachovii TaxID=451742 RepID=A0A1A8PFM2_9TELE)

HSP 1 Score: 73.2 bits (178), Expect = 2.520e-11
Identity = 66/269 (24.54%), Postives = 133/269 (49.44%), Query Frame = 0
Query:    2 LTAADWVVLDIILPILEPFMQPQTLLKGRQYVTGSLVLSFIYGLRRNL------DKTIDNLKEVPVSADADINTAKAEVMPRQPRDFKPVQVLATALDPRRKMFH-----GVEYEEKTEVGQLVQNEVVKIALKNRQGKMPGSASSQQSSVAAPLATVVEDDSSRKRPRGGFMVAAQSAESGTSFRVYL---------DPLYWWRVRSADFPHLASLAHRVLAIPAMQAESERIFCCAGDIITNNRNKLAPTTVEVLVLL---CH-LWE 246
            LT++ W +++    +L P ++  T    ++  T + V+  I  LRR L      D+ +  +K   + A   + T  AEV      + + +  +AT +DPR K  +      + + + + + ++++ E  ++A K  +   P S + +Q + ++ L +++++    ++P     V+  SA+     R+YL         +PL +W+  +  FP LA++A + L  P    +SER+F    +I+  NRN+L+P  +E+L+ L    H +WE
Sbjct:  121 LTSSQWTLMENTAEVLVP-LEELTREVSKETATAADVIPAISALRRVLSREQTTDQGVRTMKRTLLEA---VETRFAEV------EKETLYSIATLVDPRYKDRYFTKSDHLRFAKDSLIQEVMKMEENRVASKEPEAAEPVSKAPRQGAGSS-LGSILDEILEERQPEAQ-SVSTTSAD--VQVRIYLSEQTIPRKSNPLDYWKTHATQFPSLAAVATKFLCAPCTSVDSERLFSAVSNILDENRNRLSPDKLEMLIFLKKNMHFIWE 375          
BLAST of mRNA_H-elongata_contig10269.231.1 vs. uniprot
Match: A0A6H5JHP9_9PHAE (Autophagy protein 5 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHP9_9PHAE)

HSP 1 Score: 73.6 bits (179), Expect = 3.060e-11
Identity = 32/61 (52.46%), Postives = 44/61 (72.13%), Query Frame = 0
Query:  181 PLYWWRVRSADFPHLASLAHRVLAIPAMQAESERIFCCAGDIITNNRNKLAPTTVEVLVLL 241
            PL WWRV++ ++P LASLA RVL IPA QA+SER+F  AG ++T  R ++ P  V ++V L
Sbjct:  480 PLEWWRVKAREYPKLASLARRVLCIPAFQAQSERVFSSAGLVVTKTRARMDPENVGLMVFL 540          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig10269.231.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JWI1_9PHAE1.280e-4343.30Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec... [more]
A0A6H5L7Y8_9PHAE2.540e-2244.10Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JPB0_9PHAE2.170e-2073.33Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec... [more]
A0A6H5KVI1_9PHAE1.650e-1733.03Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A1A8B204_NOTFU1.170e-1239.186-phosphofructo-2-kinase/fructose-2, 6-biphosphata... [more]
A0A1A7ZKZ8_NOTFU1.510e-1224.91Zinc finger, BED domain containing 4 (Fragment) n=... [more]
A0A6H5JVE5_9PHAE2.570e-1243.75Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A1A8MBN7_9TELE3.270e-1224.91Zinc finger, BED domain containing 4 n=3 Tax=Notho... [more]
A0A1A8PFM2_9TELE2.520e-1124.54Zinc finger, BED domain containing 4 n=1 Tax=Notho... [more]
A0A6H5JHP9_9PHAE3.060e-1152.46Autophagy protein 5 n=1 Tax=Ectocarpus sp. CCAP 13... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008906HAT, C-terminal dimerisation domainPFAMPF05699Dimer_Tnp_hATcoord: 179..240
e-value: 8.0E-16
score: 57.6
NoneNo IPR availablePANTHERPTHR46169FAMILY NOT NAMEDcoord: 1..234
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 2..241

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig10269contigH-elongata_contig10269:5040..5999 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig10269.231.1mRNA_H-elongata_contig10269.231.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig10269 5040..5999 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig10269.231.1 ID=prot_H-elongata_contig10269.231.1|Name=mRNA_H-elongata_contig10269.231.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=249bp
MLTAADWVVLDIILPILEPFMQPQTLLKGRQYVTGSLVLSFIYGLRRNLD
KTIDNLKEVPVSADADINTAKAEVMPRQPRDFKPVQVLATALDPRRKMFH
GVEYEEKTEVGQLVQNEVVKIALKNRQGKMPGSASSQQSSVAAPLATVVE
DDSSRKRPRGGFMVAAQSAESGTSFRVYLDPLYWWRVRSADFPHLASLAH
RVLAIPAMQAESERIFCCAGDIITNNRNKLAPTTVEVLVLLCHLWEMV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008906HATC_C_dom
IPR012337RNaseH-like_sf