prot_H-elongata_contig102377.208.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig102377.208.1
Unique Nameprot_H-elongata_contig102377.208.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length254
Homology
BLAST of mRNA_H-elongata_contig102377.208.1 vs. uniprot
Match: D8LLB1_ECTSI (Tryptophan synthase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LLB1_ECTSI)

HSP 1 Score: 432 bits (1110), Expect = 6.520e-145
Identity = 216/254 (85.04%), Postives = 233/254 (91.73%), Query Frame = 0
Query:    1 SAAGVTGARTTIPSDLKKFVGRVRAATDKPLSAAFGISSVEQVKEVADMADGVVVGSPFMKAVDEMAPDAPASEIAAHLTKFTAVLKAGVDASEMSFVHTGKEGLSYQGKDVSGGYFGDFGGRYIPEILVEAHRELEEAYEAAKNDPAFHEEIAWYRREYIGGPTPMYHAKGLSEAMGGAQIWLKREELAHTGAHKINNAVGQALLAKRIGKKRIIAETGAGQHGVATATVCALLGMECVIYMGAVDCERQKLN 254
            S AGVTGAR+ +P+DLK FVGRVRAATDKPLS  FGISS EQV+EVA +ADGVVVGS FM AVDE+  DAPASEIAAHL KFT  LKAG+ ++EMSF HTG++GL+Y+GKDVSGGYFGDFGGRYIPE LVEAHRELEEAYEAAK DPAFHEE+AWYRREYIGGPTPMYHAK L+E MGGAQIWLKREEL+HTGAHKINNAVGQALLAKRIGK RIIAETGAGQHGVATATVCALLGMEC+IYMGAVDCERQKLN
Sbjct:  237 SVAGVTGARSGLPADLKDFVGRVRAATDKPLSVGFGISSKEQVQEVAGIADGVVVGSAFMNAVDEVDADAPASEIAAHLKKFTEGLKAGITSAEMSFEHTGEQGLAYEGKDVSGGYFGDFGGRYIPETLVEAHRELEEAYEAAKADPAFHEEVAWYRREYIGGPTPMYHAKRLTEEMGGAQIWLKREELSHTGAHKINNAVGQALLAKRIGKNRIIAETGAGQHGVATATVCALLGMECIIYMGAVDCERQKLN 490          
BLAST of mRNA_H-elongata_contig102377.208.1 vs. uniprot
Match: A0A835YTN0_9STRA (Tryptophan synthase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTN0_9STRA)

HSP 1 Score: 359 bits (922), Expect = 1.680e-116
Identity = 180/256 (70.31%), Postives = 205/256 (80.08%), Query Frame = 0
Query:    1 SAAGVTGARTTIPSDLKKFVGRVRAATDKPLSAAFGISSVEQVKEVADMADGVVVGSPFMKAVDEMAPDAPASEIAAHLTKFTAVLKAGVDASEMSFVHTGKEGLS--YQGKDVSGGYFGDFGGRYIPEILVEAHRELEEAYEAAKNDPAFHEEIAWYRREYIGGPTPMYHAKGLSEAMGGAQIWLKREELAHTGAHKINNAVGQALLAKRIGKKRIIAETGAGQHGVATATVCALLGMECVIYMGAVDCERQKLN 254
            S  GVTGART +P DLK+FV R+R+ TDKPL+  FGIS  E V  VA++ADGVV GS  M A+D+++PDA +++  AH+  FT  L  G+   +MS+ HTG E  S  Y   D+   YFG FGGRYIPE LVEAHRELE+AY  A+ DP FHEEIAWYR+EYIGGPT MYHAK LSE +GGAQIWLKREELAHTGAHKINNAVGQALLAKRIGKKRIIAETGAGQHGVATATVCALLGMEC++YMG VDCERQKLN
Sbjct:  253 SVTGVTGARTGLPDDLKQFVARIRSKTDKPLAVGFGISQPEHVNGVAELADGVVCGSAIMNAIDKISPDASSADKRAHIKAFTQSLTQGLKDGQMSYTHTGAEETSDAYAAADMKAAYFGAFGGRYIPETLVEAHRELEQAYAEAQADPKFHEEIAWYRKEYIGGPTVMYHAKRLSEQLGGAQIWLKREELAHTGAHKINNAVGQALLAKRIGKKRIIAETGAGQHGVATATVCALLGMECIVYMGEVDCERQKLN 508          
BLAST of mRNA_H-elongata_contig102377.208.1 vs. uniprot
Match: H6WB94_VAULI (Tryptophan synthase n=1 Tax=Vaucheria litorea TaxID=109269 RepID=H6WB94_VAULI)

HSP 1 Score: 340 bits (873), Expect = 2.200e-110
Identity = 167/256 (65.23%), Postives = 202/256 (78.91%), Query Frame = 0
Query:    1 SAAGVTGARTTIPSDLKKFVGRVRAATDKPLSAAFGISSVEQVKEVADMADGVVVGSPFMKAVDEMAPDAPASEIAAHLTKFTAVLKAGVDASEMSFVHTGKEG--LSYQGKDVSGGYFGDFGGRYIPEILVEAHRELEEAYEAAKNDPAFHEEIAWYRREYIGGPTPMYHAKGLSEAMGGAQIWLKREELAHTGAHKINNAVGQALLAKRIGKKRIIAETGAGQHGVATATVCALLGMECVIYMGAVDCERQKLN 254
            S  GVTGART +P++LK+F+ R+R  TDKP++  FGIS    V++V+++ADG V GS  M  +D ++ +A  ++   H+ KFTA L   ++  ++++ HTG E     Y+  D+   YFGD+GGR+IPE LVEAHRELE+AYE A  DP FHEE+ WYR+EYIGGPT MYHAK LSE MGGAQIWLKREELAHTGAHKINNAVGQALLAKRIGKKRIIAETGAGQHGVATATVCALLGMEC++YMG VDCERQKLN
Sbjct:  144 SVTGVTGARTGLPANLKEFIARIRTKTDKPIAVGFGISESSHVEQVSEIADGAVCGSAIMNHLDTISSEASPADKREHIKKFTANLTKDLNEGKLTYKHTGTENPYAEYKNADMRSAYFGDYGGRFIPETLVEAHRELEQAYEEALADPKFHEEVDWYRKEYIGGPTVMYHAKRLSEKMGGAQIWLKREELAHTGAHKINNAVGQALLAKRIGKKRIIAETGAGQHGVATATVCALLGMECIVYMGEVDCERQKLN 399          
BLAST of mRNA_H-elongata_contig102377.208.1 vs. uniprot
Match: W7TQB9_9STRA (Tryptophan synthase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TQB9_9STRA)

HSP 1 Score: 325 bits (833), Expect = 2.150e-103
Identity = 169/261 (64.75%), Postives = 197/261 (75.48%), Query Frame = 0
Query:    1 SAAGVTGARTTIPSDLKKFVGRVRAATDKPLSAAFGISSVEQVKEVADMADGVVVGSPFMKAVDEMAPDAPASEIAAHLTKFTAVLKAGV-------DASEMSFVHTGKEGLSYQGKDVSGGYFGDFGGRYIPEILVEAHRELEEAYEAAKNDPAFHEEIAWYRREYIGGPTPMYHAKGLSEAMGGAQIWLKREELAHTGAHKINNAVGQALLAKRIGKKRIIAETGAGQHGVATATVCALLGMECVIYMGAVDCERQKLN 254
            S  GVTG+R+ +P DLK FV R+RA TDK L+  FGIS+   V +VA +ADGVVVGS  + A+D   P +     AA +  F A LK G        DA  ++    G      + +DVS  +FG+FGGRYIPE LVEAHRELEEAYEAA  DPAF EE+A+YR++YIGGPTPMYHAK L+EA+GGAQIWLKREELAHTGAHKINNAVGQALLAKR+GK+RIIAETGAGQHGVATATVCAL+ MEC+IYMGA DCERQ LN
Sbjct:  232 SLTGVTGSRSDVPVDLKDFVARIRAVTDKNLAVGFGISTPTHVAQVAALADGVVVGSAILHAIDSAGPQSDTQARAAKVQAFIAELKGGAQKPGAAGDAGRVTHNGEGNGKAVAEDRDVSHRHFGEFGGRYIPETLVEAHRELEEAYEAALKDPAFQEEVAFYRKQYIGGPTPMYHAKRLTEAVGGAQIWLKREELAHTGAHKINNAVGQALLAKRLGKQRIIAETGAGQHGVATATVCALMDMECIIYMGAADCERQALN 492          
BLAST of mRNA_H-elongata_contig102377.208.1 vs. uniprot
Match: A0A7S2UWZ9_9STRA (Tryptophan synthase (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UWZ9_9STRA)

HSP 1 Score: 305 bits (780), Expect = 8.410e-98
Identity = 155/254 (61.02%), Postives = 193/254 (75.98%), Query Frame = 0
Query:    1 SAAGVTGARTTIPSDLKKFVGRVRAATDKPLSAAFGISSVEQVKEVADMADGVVVGSPFMKAVDEMAPDAPASEIAAHLTKFTAVLKAGVDASEMSFVHTGKEGLSYQGKDVSGGYFGDFGGRYIPEILVEAHRELEEAYEAAKNDPAFHEEIAWYRREYIGGPTPMYHAKGLSEAMGGAQIWLKREELAHTGAHKINNAVGQALLAKRIGKKRIIAETGAGQHGVATATVCALLGMECVIYMGAVDCERQKLN 254
            S  GVTG+RT +P+DL  F+ R+R  TD PL+  FGIS  + VK V+  ADG+VVGS  M  +D +  DAP ++  A +  F   +K     SE +F   G++  ++Q  + SG +FG+FGGRYIPE L+EAHRELEE YE AK DP F +EI +YRR++IGGPTP+Y A+ L++A+GGAQIWLKREELAHTGAHKINNAVGQA+LAKRIGK RIIAETGAGQHGVATATVCA  G++C++YMGAVDCERQ LN
Sbjct:  232 SLTGVTGSRTELPADLSDFLARIRKQTDLPLAVGFGISKPDHVKTVSANADGIVVGSAIMNTIDTVDADAPTADKCAAVKVFVESMKEARVPSE-NFQAGGEKKGAFQSPETSGSHFGEFGGRYIPETLIEAHRELEEEYEKAKVDPEFIKEIDFYRRQFIGGPTPLYFAERLTKAVGGAQIWLKREELAHTGAHKINNAVGQAILAKRIGKDRIIAETGAGQHGVATATVCAHFGLKCIVYMGAVDCERQALN 484          
BLAST of mRNA_H-elongata_contig102377.208.1 vs. uniprot
Match: D8LQU8_ECTSI (Tryptophan synthase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQU8_ECTSI)

HSP 1 Score: 291 bits (746), Expect = 4.170e-91
Identity = 157/255 (61.57%), Postives = 178/255 (69.80%), Query Frame = 0
Query:    1 SAAGVTGARTTIPSDLKKFVGRVRAATDKPLSAAFGISSVEQVKEVADMADGVVVGSPFMKAVDEMAPDAPASEIAAHLTKFTAVLKAGVDASEMSFVHTGKEGLSYQGKDVS-GGYFGDFGGRYIPEILVEAHRELEEAYEAAKNDPAFHEEIAWYRREYIGGPTPMYHAKGLSEAMGGAQIWLKREELAHTGAHKINNAVGQALLAKRIGKKRIIAETGAGQHGVATATVCALLGMECVIYMGAVDCERQKLN 254
            S  GVTGAR  +P  L+KF+ RVR AT KPLS  FGISS EQV+ VA +ADGVVVGS FM A+DE                          AS M         +  + K V  GG  G FGG YIPE LVEAHR LEEAY AAK DP F EE+AWYRREYIGGPTP++HAK LSE MGG QIWLKREE+AHTGA +INNA+ QALLAKR+GK R++A TG+GQHGVATAT CALLGMEC ++MGAVDC+RQKLN
Sbjct:  209 SVTGVTGARAHLPIGLEKFIRRVRRATGKPLSVGFGISSTEQVQAVAGIADGVVVGSAFMNAIDE--------------------------ASRMR--------IEGERKAVPPGGNIGAFGGCYIPETLVEAHRGLEEAYAAAKADPCFREELAWYRREYIGGPTPLHHAKSLSEEMGGGQIWLKREEMAHTGAQEINNAMAQALLAKRVGKTRVVAATGSGQHGVATATACALLGMECTVFMGAVDCQRQKLN 429          
BLAST of mRNA_H-elongata_contig102377.208.1 vs. uniprot
Match: A0A8J5XVG6_DIALT (Tryptophan synthase n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XVG6_DIALT)

HSP 1 Score: 292 bits (747), Expect = 5.090e-91
Identity = 158/261 (60.54%), Postives = 182/261 (69.73%), Query Frame = 0
Query:    1 SAAGVTGARTTIPSDLKKFVGRVRAATDKPLSAAFGISSVEQVKEVADMADGVVVGSPFMKAVDEMAPDAPASEIAAHLTKF-------TAVLKAGVDASEMSFVHTGKEGLSYQGKDVSGGYFGDFGGRYIPEILVEAHRELEEAYEAAKNDPAFHEEIAWYRREYIGGPTPMYHAKGLSEAMGGAQIWLKREELAHTGAHKINNAVGQALLAKRIGKKRIIAETGAGQHGVATATVCALLGMECVIYMGAVDCERQKLN 254
            S  GVTGAR  +P +L +F+ RVRA ++ PL+  FGI++   V E+A  ADGVVVGS   KAV+ +   A      A   +        TA  KA    +E       ++         +  +FG+FGGRYIPE LVEAHRELEEAY+ AK DPAFH E+A YR  YIGGPTPMYHAK LS  MGGAQIWLKREELAHTGAHKINNAVGQALLAKR+GKKRIIAETGAGQHGVATATVCALLG+ECV+YMGA D  RQ LN
Sbjct:  182 SLTGVTGARAELPKELPQFIKRVRANSNVPLAVGFGIATRAHVAEIATFADGVVVGSAVCKAVENVKDVADIRPTLAAFVQSLLPDSAQTATAKAARPGAENEEGALAQQNAKIDESVKAAAHFGEFGGRYIPETLVEAHRELEEAYDKAKKDPAFHAEVAEYRARYIGGPTPMYHAKRLSAEMGGAQIWLKREELAHTGAHKINNAVGQALLAKRLGKKRIIAETGAGQHGVATATVCALLGIECVVYMGAEDVRRQSLN 442          
BLAST of mRNA_H-elongata_contig102377.208.1 vs. uniprot
Match: A0A7S0XDP8_9STRA (Tryptophan synthase n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0XDP8_9STRA)

HSP 1 Score: 293 bits (749), Expect = 5.620e-91
Identity = 152/258 (58.91%), Postives = 185/258 (71.71%), Query Frame = 0
Query:    1 SAAGVTGARTTIPSDLKKFVGRVRAATDKPLSAAFGISSVEQVKEVADMADGVVVGSPFMKAVDEMAPDAPASEIAAHLTKFTAVLKAGVD----ASEMSFVHTGKEGLSYQGKDVSGGYFGDFGGRYIPEILVEAHRELEEAYEAAKNDPAFHEEIAWYRREYIGGPTPMYHAKGLSEAMGGAQIWLKREELAHTGAHKINNAVGQALLAKRIGKKRIIAETGAGQHGVATATVCALLGMECVIYMGAVDCERQKLN 254
            S  GVTGAR  +PSDLK+FV R+R ++D PL+  FGIS+ E V +V+++A+GVV+GS  +  +D      P  E A  L  F + L   +     A +    HT         +D+S   FG+FGGRYIPE L+EAHRELE AY +A  DP FHEEIA+YRRE+ GGPTP+Y A+ L++ MGGA IW KREELAHTGAHKINNAVGQALLAKR+GK+RIIAETGAGQHGVATA VCA  G++C IYMGAVDCERQ LN
Sbjct:  236 SVTGVTGARGELPSDLKEFVNRIRKSSDVPLAVGFGISTPEHVHQVSEIAEGVVLGSAIISTIDSALDKTP-KERAKTLEDFISTLSVALTKRETAKDTENFHTDNSAPKPIHRDISNRNFGEFGGRYIPETLIEAHRELEAAYASAIADPKFHEEIAFYRREFTGGPTPLYFAENLTKKMGGADIWFKREELAHTGAHKINNAVGQALLAKRLGKRRIIAETGAGQHGVATAAVCAHFGLDCTIYMGAVDCERQALN 492          
BLAST of mRNA_H-elongata_contig102377.208.1 vs. uniprot
Match: A0A7R9Y8B0_9STRA (Tryptophan synthase n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9Y8B0_9STRA)

HSP 1 Score: 286 bits (732), Expect = 9.900e-90
Identity = 159/259 (61.39%), Postives = 187/259 (72.20%), Query Frame = 0
Query:    1 SAAGVTGARTTIPSDLKKFVGRVRAATDKPLSAAFGISSVEQVKEVADMADGVVVGSPFMKAVDEMAPDAPASEIAAHLTKFTAVLKAGVDASEMSFVHTGKEG-LSYQGKDVSGGY----FGDFGGRYIPEILVEAHRELEEAYEAAKNDPAFHEEIAWYRREYIGGPTPMYHAKGLSEAMGGAQIWLKREELAHTGAHKINNAVGQALLAKRIGKKRIIAETGAGQHGVATATVCALLGMECVIYMGAVDCERQKLN 254
            S  G+TG       DL+ FVGRVR  TDKPL+  FGI + EQV EV+ +ADGVVVGS     V+ ++ D   +E AA+L +F A LK+GV       V  GK G LS    +    Y    FGDFGGRYIPE L+ AH ELE AY+ A  DPAF EEI +YRRE+IGGPTP+Y AK L+E  GGA+IWLKREELAHTGAHKINNAVGQALLAKR+GKKRIIAETGAGQHGVA+A VCALL ++  +YMGAVDC+RQ+LN
Sbjct:   94 SVTGITGGAGATAEDLQAFVGRVRKFTDKPLAVGFGIKTPEQVAEVSQIADGVVVGSAI---VNSVSLDKSLAENAAYLEEFCASLKSGVQERSEENV-AGKSGPLSEADAETLATYGDSHFGDFGGRYIPETLLRAHMELEAAYKEAMEDPAFKEEIDFYRREFIGGPTPLYLAKRLTEKCGGARIWLKREELAHTGAHKINNAVGQALLAKRLGKKRIIAETGAGQHGVASACVCALLDLDLTVYMGAVDCDRQRLN 348          
BLAST of mRNA_H-elongata_contig102377.208.1 vs. uniprot
Match: A0A7S4DAV4_HETAK (Tryptophan synthase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DAV4_HETAK)

HSP 1 Score: 288 bits (737), Expect = 4.180e-89
Identity = 156/259 (60.23%), Postives = 179/259 (69.11%), Query Frame = 0
Query:    1 SAAGVTGARTTIPSDLKKFVGRVRAATDKPLSAAFGISSVEQVKEVADMADGVVVGSPFMKAVDEMAPDAPASEIAAHLTKFTAVLKAGVDASEMSFVHTGKEGLSYQGKDVSGGYFGD-----FGGRYIPEILVEAHRELEEAYEAAKNDPAFHEEIAWYRREYIGGPTPMYHAKGLSEAMGGAQIWLKREELAHTGAHKINNAVGQALLAKRIGKKRIIAETGAGQHGVATATVCALLGMECVIYMGAVDCERQKLN 254
            S  GVTGAR+ +P DL  FV R+R  TD PL+  FGIS  E V +V+ +ADGVVVGS  M  +D  A  + A E AA L  F   LK G            +   +Y     S  YFGD     FGGRYIPE L EAH ELE+AY  AK DPAF  E+ +YRRE++GGPTPMYHA+ LS+  GGAQIWLKREELAHTGAHKINNAVGQALL KR+GK R+IAETGAGQHGVATA VCA +G+ CV+YMGAVDCERQ LN
Sbjct:  226 SLTGVTGARSGLPDDLPDFVARIRGVTDMPLAVGFGISQPEHVAQVSKLADGVVVGSAIMNTIDGCAAGSSAQEKAAALEAFVGTLK-GACGEPAQTAGPARARGAYVAPPTST-YFGDDAQTGFGGRYIPETLAEAHVELEKAYAEAKADPAFQAEVDFYRREFVGGPTPMYHAERLSKHCGGAQIWLKREELAHTGAHKINNAVGQALLVKRMGKTRVIAETGAGQHGVATAAVCAHMGLPCVVYMGAVDCERQALN 482          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig102377.208.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LLB1_ECTSI6.520e-14585.04Tryptophan synthase n=2 Tax=Ectocarpus TaxID=2879 ... [more]
A0A835YTN0_9STRA1.680e-11670.31Tryptophan synthase n=1 Tax=Tribonema minus TaxID=... [more]
H6WB94_VAULI2.200e-11065.23Tryptophan synthase n=1 Tax=Vaucheria litorea TaxI... [more]
W7TQB9_9STRA2.150e-10364.75Tryptophan synthase n=2 Tax=Monodopsidaceae TaxID=... [more]
A0A7S2UWZ9_9STRA8.410e-9861.02Tryptophan synthase (Fragment) n=1 Tax=Fibrocapsa ... [more]
D8LQU8_ECTSI4.170e-9161.57Tryptophan synthase n=1 Tax=Ectocarpus siliculosus... [more]
A0A8J5XVG6_DIALT5.090e-9160.54Tryptophan synthase n=1 Tax=Diacronema lutheri Tax... [more]
A0A7S0XDP8_9STRA5.620e-9158.91Tryptophan synthase n=1 Tax=Chromulina nebulosa Ta... [more]
A0A7R9Y8B0_9STRA9.900e-9061.39Tryptophan synthase n=1 Tax=Pinguiococcus pyrenoid... [more]
A0A7S4DAV4_HETAK4.180e-8960.23Tryptophan synthase n=1 Tax=Heterosigma akashiwo T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002028Tryptophan synthase, alpha chainPFAMPF00290Trp_syntAcoord: 1..71
e-value: 2.4E-16
score: 59.4
NoneNo IPR availableGENE3D3.40.50.1100coord: 97..183
e-value: 2.3E-16
score: 61.8
NoneNo IPR availableGENE3D3.40.50.1100coord: 184..254
e-value: 2.8E-31
score: 110.5
IPR013785Aldolase-type TIM barrelGENE3D3.20.20.70coord: 1..96
e-value: 3.7E-21
score: 77.0
IPR001926Pyridoxal-phosphate dependent enzymePFAMPF00291PALPcoord: 161..248
e-value: 1.3E-20
score: 74.0
IPR006654Tryptophan synthase, beta chainPANTHERPTHR42882FAMILY NOT NAMEDcoord: 109..254
IPR006653Tryptophan synthase, beta chain, conserved sitePROSITEPS00168TRP_SYNTHASE_BETAcoord: 189..203
IPR036052Tryptophan synthase beta subunit-like PLP-dependent enzymeSUPERFAMILY53686Tryptophan synthase beta subunit-like PLP-dependent enzymescoord: 114..254
IPR011060Ribulose-phosphate binding barrelSUPERFAMILY51366Ribulose-phoshate binding barrelcoord: 1..86

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig102377contigH-elongata_contig102377:274..2342 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig102377.208.1mRNA_H-elongata_contig102377.208.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig102377 274..2342 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig102377.208.1 ID=prot_H-elongata_contig102377.208.1|Name=mRNA_H-elongata_contig102377.208.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=254bp
SAAGVTGARTTIPSDLKKFVGRVRAATDKPLSAAFGISSVEQVKEVADMA
DGVVVGSPFMKAVDEMAPDAPASEIAAHLTKFTAVLKAGVDASEMSFVHT
GKEGLSYQGKDVSGGYFGDFGGRYIPEILVEAHRELEEAYEAAKNDPAFH
EEIAWYRREYIGGPTPMYHAKGLSEAMGGAQIWLKREELAHTGAHKINNA
VGQALLAKRIGKKRIIAETGAGQHGVATATVCALLGMECVIYMGAVDCER
QKLN
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002028Trp_synthase_suA
IPR013785Aldolase_TIM
IPR001926PLP-dep
IPR006654Trp_synth_beta
IPR006653Trp_synth_b_CS
IPR036052Trypto_synt_PLP_dependent
IPR011060RibuloseP-bd_barrel