prot_H-elongata_contig102.180.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig102.180.1
Unique Nameprot_H-elongata_contig102.180.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length57
Homology
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BLAST of mRNA_H-elongata_contig102.180.1 vs. uniprot
Match: A0A6H5K0E9_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K0E9_9PHAE)

HSP 1 Score: 55.1 bits (131), Expect = 2.380e-7
Identity = 22/45 (48.89%), Postives = 33/45 (73.33%), Query Frame = 0 
Query:   13 LSKFATCANVLYPGIYQSLLKVVDIFNFNPTGFPWVGCVININFH 57
            L++F + ANV YP +YQ LL V+D+FNF+ +     GCV+++NFH
Sbjct: 1182 LTQFTSVANVTYPDVYQDLLDVLDVFNFDLSWLLSAGCVVDMNFH 1226
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig102.180.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5K0E9_9PHAE2.380e-748.89Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig102contigH-elongata_contig102:26001..26171 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig102.180.1mRNA_H-elongata_contig102.180.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig102 25839..26171 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig102.180.1 ID=prot_H-elongata_contig102.180.1|Name=mRNA_H-elongata_contig102.180.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=57bp
MCNFSPIPLGSFLSKFATCANVLYPGIYQSLLKVVDIFNFNPTGFPWVGC
VININFH
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