prot_H-elongata_contig101914.169.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig101914.169.1
Unique Nameprot_H-elongata_contig101914.169.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length64
Homology
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BLAST of mRNA_H-elongata_contig101914.169.1 vs. uniprot
Match: D7G8X9_ECTSI (Ubiquitin-like domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G8X9_ECTSI)

HSP 1 Score: 87.0 bits (214), Expect = 7.290e-21
Identity = 39/49 (79.59%), Postives = 43/49 (87.76%), Query Frame = 0 
Query:    1 YVRLKRHNITVFVHCEPADNFATIKTKAGKLMGIDPGQMGLFATRDMVR 49
            Y+RLKRHN TVF+HCEPADNFATIK KAGKLM I+ GQ+GLFATRD  R
Sbjct:    4 YIRLKRHNTTVFMHCEPADNFATIKAKAGKLMNIEQGQIGLFATRDKAR 52
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig101914.169.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G8X9_ECTSI7.290e-2179.59Ubiquitin-like domain-containing protein n=2 Tax=E... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig101914contigH-elongata_contig101914:1473..1664 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig101914.169.1mRNA_H-elongata_contig101914.169.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig101914 1473..1664 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig101914.169.1 ID=prot_H-elongata_contig101914.169.1|Name=mRNA_H-elongata_contig101914.169.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=64bp
YVRLKRHNITVFVHCEPADNFATIKTKAGKLMGIDPGQMGLFATRDMVRM
SSTREIHADSSPM*
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