prot_H-elongata_contig101226.108.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig101226.108.1
Unique Nameprot_H-elongata_contig101226.108.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length81
Homology
BLAST of mRNA_H-elongata_contig101226.108.1 vs. uniprot
Match: A0A6H5KCH1_9PHAE (Mitochondrial inner membrane protease ATP23 n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KCH1_9PHAE)

HSP 1 Score: 121 bits (303), Expect = 8.870e-33
Identity = 56/72 (77.78%), Postives = 63/72 (87.50%), Query Frame = 0
Query:    1 IRASNTSGECSFNLEFLRGNWRWGGQKKECVKRRTELSLKATPGCSEKARESVESAFTPYYYDTEPYDKNPL 72
            IRASNTSGECSF++E  RG+ +WGGQ+KECVKRR ELS+KATPGCS+KA E V SAF P YYDTEPYDKNPL
Sbjct:  138 IRASNTSGECSFDMEVRRGHLKWGGQQKECVKRRAELSVKATPGCSDKAAEYVNSAFKPCYYDTEPYDKNPL 209          
BLAST of mRNA_H-elongata_contig101226.108.1 vs. uniprot
Match: A0A8J5RQ03_ZIZPA (Mitochondrial inner membrane protease ATP23 n=1 Tax=Zizania palustris TaxID=103762 RepID=A0A8J5RQ03_ZIZPA)

HSP 1 Score: 65.1 bits (157), Expect = 4.780e-11
Identity = 31/72 (43.06%), Postives = 49/72 (68.06%), Query Frame = 0
Query:    1 IRASNTSGECSFNLEFLRGNWRWGGQKKECVKRRTELSLKATPGCSEKA-RESVESAFTPYYYDTEPYDKNP 71
            IRA++ SG+C +  E LRG  +  G ++ECVKRR+ +SLK  P CS+ A ++++E+ +   Y DT P+D+ P
Sbjct:  129 IRANHLSGDCHYKRELLRGFMKMRGHEQECVKRRSLMSLKTNPYCSDAAAKDAIEAVWDICYNDTRPFDRAP 200          
BLAST of mRNA_H-elongata_contig101226.108.1 vs. uniprot
Match: A0A6A4R2U0_LUPAL (Mitochondrial inner membrane protease ATP23 n=3 Tax=Lupinus TaxID=3869 RepID=A0A6A4R2U0_LUPAL)

HSP 1 Score: 63.9 bits (154), Expect = 1.750e-10
Identity = 29/72 (40.28%), Postives = 47/72 (65.28%), Query Frame = 0
Query:    1 IRASNTSGECSFNLEFLRGNWRWGGQKKECVKRRTELSLKATPGCS-EKARESVESAFTPYYYDTEPYDKNP 71
            IRA++ SG+C +  E LRG  ++GGQ KEC++RR   SL   P C+   A++++E+ +   Y D +P+D+ P
Sbjct:  150 IRAAHLSGDCHYKRELLRGFTKFGGQGKECIRRRVMQSLATNPDCAGTAAKDTIEAVWDKCYNDKQPFDREP 221          
BLAST of mRNA_H-elongata_contig101226.108.1 vs. uniprot
Match: A0A0D9VFY3_9ORYZ (Mitochondrial inner membrane protease ATP23 n=1 Tax=Leersia perrieri TaxID=77586 RepID=A0A0D9VFY3_9ORYZ)

HSP 1 Score: 62.4 bits (150), Expect = 2.530e-10
Identity = 31/72 (43.06%), Postives = 48/72 (66.67%), Query Frame = 0
Query:    1 IRASNTSGECSFNLEFLRGNWRWGGQKKECVKRRTELSLKATPGCSEKA-RESVESAFTPYYYDTEPYDKNP 71
            IRA++ SG C +  E LRG  +  GQ++ECVKRR+ +S++  P CS  A +++VE+ +   Y DT P+D+ P
Sbjct:   87 IRANHLSGNCHYKRELLRGFMKIRGQEQECVKRRSLMSVRNNPYCSNSAAKDAVEAVWDICYNDTRPFDRAP 158          
BLAST of mRNA_H-elongata_contig101226.108.1 vs. uniprot
Match: A0A0D9VFY1_9ORYZ (Mitochondrial inner membrane protease ATP23 n=2 Tax=Leersia perrieri TaxID=77586 RepID=A0A0D9VFY1_9ORYZ)

HSP 1 Score: 62.4 bits (150), Expect = 6.980e-10
Identity = 31/72 (43.06%), Postives = 48/72 (66.67%), Query Frame = 0
Query:    1 IRASNTSGECSFNLEFLRGNWRWGGQKKECVKRRTELSLKATPGCSEKA-RESVESAFTPYYYDTEPYDKNP 71
            IRA++ SG C +  E LRG  +  GQ++ECVKRR+ +S++  P CS  A +++VE+ +   Y DT P+D+ P
Sbjct:  154 IRANHLSGNCHYKRELLRGFMKIRGQEQECVKRRSLMSVRNNPYCSNSAAKDAVEAVWDICYNDTRPFDRAP 225          
BLAST of mRNA_H-elongata_contig101226.108.1 vs. uniprot
Match: A0A7S4GGD4_9EUGL (Mitochondrial inner membrane protease ATP23 n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4GGD4_9EUGL)

HSP 1 Score: 57.8 bits (138), Expect = 2.770e-8
Identity = 31/73 (42.47%), Postives = 43/73 (58.90%), Query Frame = 0
Query:    1 IRASNTSGECSFNLEFLRGNWRWG--GQKKECVKRRTELSLKATPGCSEKARESVESAFTPYYYDTEPYDKNP 71
            IRA+  SG+CS+ LE+ RGNW++    Q K CV+RR + SL   P CS K    V + +   Y D EP+ + P
Sbjct:  124 IRAARLSGDCSWWLEWQRGNWQFDFQSQGKRCVERRAKKSLDLNPKCSAKGYGYVNNVWEACYRDFEPFRRPP 196          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig101226.108.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A6H5KCH1_9PHAE8.870e-3377.78Mitochondrial inner membrane protease ATP23 n=2 Ta... [more]
A0A8J5RQ03_ZIZPA4.780e-1143.06Mitochondrial inner membrane protease ATP23 n=1 Ta... [more]
A0A6A4R2U0_LUPAL1.750e-1040.28Mitochondrial inner membrane protease ATP23 n=3 Ta... [more]
A0A0D9VFY3_9ORYZ2.530e-1043.06Mitochondrial inner membrane protease ATP23 n=1 Ta... [more]
A0A0D9VFY1_9ORYZ6.980e-1043.06Mitochondrial inner membrane protease ATP23 n=2 Ta... [more]
A0A7S4GGD4_9EUGL2.770e-842.47Mitochondrial inner membrane protease ATP23 n=1 Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019165Peptidase M76, ATP23PFAMPF09768Peptidase_M76coord: 1..68
e-value: 9.9E-17
score: 61.2
IPR019165Peptidase M76, ATP23PANTHERPTHR21711KUB3-PROV PROTEINcoord: 1..70

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig101226contigH-elongata_contig101226:1157..1588 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig101226.108.1mRNA_H-elongata_contig101226.108.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig101226 1157..1588 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig101226.108.1 ID=prot_H-elongata_contig101226.108.1|Name=mRNA_H-elongata_contig101226.108.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=81bp
IRASNTSGECSFNLEFLRGNWRWGGQKKECVKRRTELSLKATPGCSEKAR
ESVESAFTPYYYDTEPYDKNPLYQRVRVRL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019165Peptidase_M76_ATP23