prot_H-elongata_contig101109.101.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig101109.101.1
Unique Nameprot_H-elongata_contig101109.101.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length51
Homology
BLAST of mRNA_H-elongata_contig101109.101.1 vs. uniprot
Match: D8LC33_ECTSI (RING-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC33_ECTSI)

HSP 1 Score: 103 bits (256), Expect = 9.390e-25
Identity = 45/50 (90.00%), Postives = 48/50 (96.00%), Query Frame = 0
Query:    1 DGRCCVCFRRRSRVVTFPCMHMATCPQCSESLSACPLCRASISEKHTVFL 50
            +G CCVCFRRRSRVVTFPCMHMATCPQCSESL+ CPLCRA+ISEKHTVFL
Sbjct:  374 EGNCCVCFRRRSRVVTFPCMHMATCPQCSESLTVCPLCRANISEKHTVFL 423          
BLAST of mRNA_H-elongata_contig101109.101.1 vs. uniprot
Match: A0A6H5JJL0_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJL0_9PHAE)

HSP 1 Score: 100 bits (250), Expect = 1.330e-23
Identity = 44/50 (88.00%), Postives = 47/50 (94.00%), Query Frame = 0
Query:    1 DGRCCVCFRRRSRVVTFPCMHMATCPQCSESLSACPLCRASISEKHTVFL 50
            +G CCVCFRRRSRVV FPCMHMATCPQCSESL+ CPLCRA+ISEKHTVFL
Sbjct:  572 EGNCCVCFRRRSRVVMFPCMHMATCPQCSESLAVCPLCRANISEKHTVFL 621          
BLAST of mRNA_H-elongata_contig101109.101.1 vs. uniprot
Match: UPI001F078695 (E3 ubiquitin-protein ligase XIAP n=1 Tax=Hypomesus transpacificus TaxID=137520 RepID=UPI001F078695)

HSP 1 Score: 50.8 bits (120), Expect = 5.690e-6
Identity = 21/49 (42.86%), Postives = 32/49 (65.31%), Query Frame = 0
Query:    1 DGRCCVCFRRRSRVVTFPCMHMATCPQCSESLSACPLCRASISEKHTVF 49
            + +C VC  R + +V  PC H+ TC +CSESLS CP+C  +I++K   +
Sbjct:  413 EKQCKVCMDRDTCIVFIPCGHLVTCKECSESLSKCPICCGTITQKIKTY 461          
BLAST of mRNA_H-elongata_contig101109.101.1 vs. uniprot
Match: X6NBG7_RETFI (Apoptosis inhibitor IAP n=1 Tax=Reticulomyxa filosa TaxID=46433 RepID=X6NBG7_RETFI)

HSP 1 Score: 49.3 bits (116), Expect = 1.990e-5
Identity = 21/47 (44.68%), Postives = 29/47 (61.70%), Query Frame = 0
Query:    4 CCVCFRRRSRVVTFPCMHMATCPQCSESLSACPLCRASISEK-HTVF 49
            C +C R    ++  PC H+ATC QCS  LS CPLC   +++K H +F
Sbjct:  290 CQLCRREEKSILFLPCAHVATCSQCSNPLSKCPLCNTLVNQKIHVLF 336          
BLAST of mRNA_H-elongata_contig101109.101.1 vs. uniprot
Match: A0A8C9RBQ3_SCLFO (E3 ubiquitin-protein ligase XIAP-like n=2 Tax=Scleropages formosus TaxID=113540 RepID=A0A8C9RBQ3_SCLFO)

HSP 1 Score: 49.3 bits (116), Expect = 1.990e-5
Identity = 20/50 (40.00%), Postives = 32/50 (64.00%), Query Frame = 0
Query:    1 DGRCCVCFRRRSRVVTFPCMHMATCPQCSESLSACPLCRASISEKHTVFL 50
            + +C +C  R   +V  PC H+ATC  CS+SL+ CP+C A I++K   ++
Sbjct:  343 EKQCKICMDRDIAIVFIPCGHLATCNDCSQSLTKCPICCAVITQKIKAYI 392          
BLAST of mRNA_H-elongata_contig101109.101.1 vs. uniprot
Match: A0A1A7YLH5_9TELE (X-linked inhibitor of apoptosis n=2 Tax=Iconisemion striatum TaxID=60296 RepID=A0A1A7YLH5_9TELE)

HSP 1 Score: 48.9 bits (115), Expect = 2.730e-5
Identity = 20/50 (40.00%), Postives = 32/50 (64.00%), Query Frame = 0
Query:    1 DGRCCVCFRRRSRVVTFPCMHMATCPQCSESLSACPLCRASISEKHTVFL 50
            + +C +C  R   +V  PC H+ATC +CSE L+ CP+C  +I++K   +L
Sbjct:  398 EKQCKICMDRDLCIVFLPCAHLATCRECSELLTKCPICCETITQKVKTYL 447          
BLAST of mRNA_H-elongata_contig101109.101.1 vs. uniprot
Match: A0A1A8AA23_NOTFU (X-linked inhibitor of apoptosis n=8 Tax=Nothobranchius TaxID=28779 RepID=A0A1A8AA23_NOTFU)

HSP 1 Score: 48.5 bits (114), Expect = 3.730e-5
Identity = 19/50 (38.00%), Postives = 32/50 (64.00%), Query Frame = 0
Query:    1 DGRCCVCFRRRSRVVTFPCMHMATCPQCSESLSACPLCRASISEKHTVFL 50
            + +C +C  R   +V  PC H+ATC +CSE L+ CP+C  +I++K   ++
Sbjct:  403 EKQCKICMDRDLCIVFLPCAHLATCKECSEVLTKCPICCEAITQKVKTYI 452          
BLAST of mRNA_H-elongata_contig101109.101.1 vs. uniprot
Match: A7RYU6_NEMVE (Predicted protein n=3 Tax=Nematostella vectensis TaxID=45351 RepID=A7RYU6_NEMVE)

HSP 1 Score: 48.5 bits (114), Expect = 3.750e-5
Identity = 18/47 (38.30%), Postives = 31/47 (65.96%), Query Frame = 0
Query:    4 CCVCFRRRSRVVTFPCMHMATCPQCSESLSACPLCRASISEKHTVFL 50
            C +C   RS VV  PC H+  C  C+ ++SACP+CR ++S++  +++
Sbjct:  698 CVICLDNRSDVVMLPCGHVCCCSNCAGAVSACPICRQTLSQRVRMYI 744          
BLAST of mRNA_H-elongata_contig101109.101.1 vs. uniprot
Match: A0A7F5RLU3_AGRPL (E3 ubiquitin-protein ligase LRSAM1 isoform X1 n=3 Tax=Agrilus planipennis TaxID=224129 RepID=A0A7F5RLU3_AGRPL)

HSP 1 Score: 48.1 bits (113), Expect = 5.140e-5
Identity = 22/48 (45.83%), Postives = 26/48 (54.17%), Query Frame = 0
Query:    2 GRCCVCFRRRSRVVTFPCMHMATCPQCSESLSACPLCRASISEKHTVF 49
            G C VC   +   +  PC H   C  CS  +SACPLCR SI  KH V+
Sbjct:  639 GECIVCMEFKCETIFVPCGHYCCCTNCSNVISACPLCRTSI--KHKVY 684          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig101109.101.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 9
Match NameE-valueIdentityDescription
D8LC33_ECTSI9.390e-2590.00RING-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5JJL0_9PHAE1.330e-2388.00RING-type domain-containing protein n=1 Tax=Ectoca... [more]
UPI001F0786955.690e-642.86E3 ubiquitin-protein ligase XIAP n=1 Tax=Hypomesus... [more]
X6NBG7_RETFI1.990e-544.68Apoptosis inhibitor IAP n=1 Tax=Reticulomyxa filos... [more]
A0A8C9RBQ3_SCLFO1.990e-540.00E3 ubiquitin-protein ligase XIAP-like n=2 Tax=Scle... [more]
A0A1A7YLH5_9TELE2.730e-540.00X-linked inhibitor of apoptosis n=2 Tax=Iconisemio... [more]
A0A1A8AA23_NOTFU3.730e-538.00X-linked inhibitor of apoptosis n=8 Tax=Nothobranc... [more]
A7RYU6_NEMVE3.750e-538.30Predicted protein n=3 Tax=Nematostella vectensis T... [more]
A0A7F5RLU3_AGRPL5.140e-545.83E3 ubiquitin-protein ligase LRSAM1 isoform X1 n=3 ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 1..50
e-value: 2.3E-13
score: 51.3
NoneNo IPR availablePFAMPF13920zf-C3HC4_3coord: 2..44
e-value: 3.1E-12
score: 46.1
NoneNo IPR availablePANTHERPTHR10044INHIBITOR OF APOPTOSIScoord: 3..49
NoneNo IPR availablePANTHERPTHR10044:SF139DEATH-ASSOCIATED INHIBITOR OF APOPTOSIS 2coord: 3..49
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 3..46
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 4..39
score: 10.203

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig101109contigH-elongata_contig101109:253..876 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig101109.101.1mRNA_H-elongata_contig101109.101.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig101109 253..876 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig101109.101.1 ID=prot_H-elongata_contig101109.101.1|Name=mRNA_H-elongata_contig101109.101.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=51bp
DGRCCVCFRRRSRVVTFPCMHMATCPQCSESLSACPLCRASISEKHTVFL
*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013083Znf_RING/FYVE/PHD
IPR001841Znf_RING