prot_H-elongata_contig100911.83.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig100911.83.1
Unique Nameprot_H-elongata_contig100911.83.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length114
Homology
BLAST of mRNA_H-elongata_contig100911.83.1 vs. uniprot
Match: D8LC14_ECTSI (RF_PROK_I domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC14_ECTSI)

HSP 1 Score: 157 bits (398), Expect = 4.630e-46
Identity = 83/111 (74.77%), Postives = 96/111 (86.49%), Query Frame = 0
Query:    3 RSSGAGGQNVNKLSTKVEIRFVVEEAEWLPRDVRLRLARHQSGRITSRGELVITSQEFRTQKQNRHAAMQKLREMIKEAWEPAKERKMRTGISKAGKEMRLAEKHRRAKVK 113
            R+SGAGGQNVNK+STKVE+RFVV EAEWLP DVRLRLAR + GR+ ++GELV+T+QEFRTQKQNR  A+ KLREMI EAWEPAKERKMRTGISK GK +R  +K  R+KVK
Sbjct:  128 RASGAGGQNVNKVSTKVEMRFVVSEAEWLPYDVRLRLARQEKGRMNNKGELVVTAQEFRTQKQNRSQALAKLREMINEAWEPAKERKMRTGISKKGKAIRKQDKLHRSKVK 238          
BLAST of mRNA_H-elongata_contig100911.83.1 vs. uniprot
Match: A0A8J5Y1J9_DIALT (RF_PROK_I domain-containing protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5Y1J9_DIALT)

HSP 1 Score: 105 bits (263), Expect = 1.020e-26
Identity = 57/112 (50.89%), Postives = 78/112 (69.64%), Query Frame = 0
Query:    3 RSSGAGGQNVNKLSTKVEIRFVVEEAEWLPRDVRLRLARHQSGRITSRGELVITSQEFRTQKQNRHAAMQKLREMIKEAWEPAKERKMRTGISKAGKEMRLAEKHRRAKVKQ 114
            RSSG GGQNVNK++TKVE+RF V  A+WLP DV+ RL    S R+   GEL++T+ E R+Q  N  +A++K++E++  A  P KER+MR G+S   K  R+ +K R AKVKQ
Sbjct:   44 RSSGPGGQNVNKVNTKVELRFNVRAADWLPADVKARLIDDNSNRMNKEGELIVTASESRSQSANMDSALRKVQELVDVACIPPKEREMRVGLSAVTKRQRVEDKRRTAKVKQ 155          
BLAST of mRNA_H-elongata_contig100911.83.1 vs. uniprot
Match: A0A1Z5KKA6_FISSO (Peptidyl-tRNA hydrolase ICT1 n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KKA6_FISSO)

HSP 1 Score: 106 bits (264), Expect = 3.680e-26
Identity = 60/112 (53.57%), Postives = 79/112 (70.54%), Query Frame = 0
Query:    3 RSSGAGGQNVNKLSTKVEIRFVVEEAEWLPRDVRLRLARHQSGRITSRGELVITSQEFRTQKQNRHAAMQKLREMIKEAWEPAKERKMRTGISKAGKEMRLAEKHRRAKVKQ 114
            RSSGAGGQNVNK++++V++R  V EA W+P +VR RL + Q+ RI+  G L I +QE RTQ  NR AA+QKL+ M+ +AW   KER+MR GIS   KE R   K RR+ VK+
Sbjct:  109 RSSGAGGQNVNKVNSQVQVRLNVHEAYWIPYEVRQRLLQQQANRISKEGVLTIAAQEHRTQVANRKAAVQKLQNMLLQAWPRPKERRMRQGISIKTKEQRKEFKRRRSDVKE 220          
BLAST of mRNA_H-elongata_contig100911.83.1 vs. uniprot
Match: A0A1Z5KFY9_FISSO (Peptidyl-tRNA hydrolase ICT1 n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KFY9_FISSO)

HSP 1 Score: 106 bits (264), Expect = 3.770e-26
Identity = 60/111 (54.05%), Postives = 79/111 (71.17%), Query Frame = 0
Query:    3 RSSGAGGQNVNKLSTKVEIRFVVEEAEWLPRDVRLRLARHQSGRITSRGELVITSQEFRTQKQNRHAAMQKLREMIKEAWEPAKERKMRTGISKAGKEMRLAEKHRRAKVK 113
            RSSGAGGQNVNK++++V++R  V EA W+P +VR RL + Q+ RI+  G L I +QE RTQ  NR AA+QKLR+M+ +AW   KER++R GIS   KE R   K RR+ VK
Sbjct:  110 RSSGAGGQNVNKVNSQVQLRLNVNEAYWIPYEVRQRLMQQQANRISKEGVLTIAAQEHRTQVANRKAAIQKLRDMLLQAWPRPKERRIRQGISIKTKEQRKEFKRRRSDVK 220          
BLAST of mRNA_H-elongata_contig100911.83.1 vs. uniprot
Match: A0A7S2PK85_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2PK85_9STRA)

HSP 1 Score: 105 bits (262), Expect = 1.350e-25
Identity = 53/100 (53.00%), Postives = 76/100 (76.00%), Query Frame = 0
Query:    3 RSSGAGGQNVNKLSTKVEIRFVVEEAEWLPRDVRLRLARHQSGRITSRGELVITSQEFRTQKQNRHAAMQKLREMIKEAWEPAKERKMRTGISKAGKEMR 102
            R+SGAGGQNVNK++TKVE+RF ++ A W+PR+VR RL  +++GRI + G   IT QE RTQ QNR  A++KL++++K +W+  K RK+R G++K  KE R
Sbjct:  137 RASGAGGQNVNKVNTKVELRFHIDSANWIPREVRDRLKTNEAGRINNEGYFAITCQENRTQVQNRKEAIKKLQDILKSSWDRPKVRKLRKGLTKKAKENR 236          
BLAST of mRNA_H-elongata_contig100911.83.1 vs. uniprot
Match: K0R9L2_THAOC (RF_PROK_I domain-containing protein n=2 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0R9L2_THAOC)

HSP 1 Score: 102 bits (255), Expect = 1.510e-24
Identity = 56/112 (50.00%), Postives = 79/112 (70.54%), Query Frame = 0
Query:    3 RSSGAGGQNVNKLSTKVEIRFVVEEAEWLPRDVRLRLARHQSGRITSRGELVITSQEFRTQKQNRHAAMQKLREMIKEAWEPAKERKMRTGISKAGKEMRLAEKHRRAKVKQ 114
            R+SGAGGQNVNK++TKVE+RF +  AEW+P +VR RL  +++ RI + G + ITSQE RTQ QNR  AM+KL+++++ +W   K RK R G ++  KE RL  K + +  KQ
Sbjct:  138 RASGAGGQNVNKVNTKVEMRFHLPSAEWIPSEVRDRLQNNEANRINNEGYMSITSQEHRTQMQNRKDAMKKLQDIVRNSWARPKVRKTRKGPTRKAKEKRLENKKKNSLKKQ 249          
BLAST of mRNA_H-elongata_contig100911.83.1 vs. uniprot
Match: B8C3Q8_THAPS (RF_PROK_I domain-containing protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C3Q8_THAPS)

HSP 1 Score: 98.6 bits (244), Expect = 3.370e-24
Identity = 51/100 (51.00%), Postives = 72/100 (72.00%), Query Frame = 0
Query:    3 RSSGAGGQNVNKLSTKVEIRFVVEEAEWLPRDVRLRLARHQSGRITSRGELVITSQEFRTQKQNRHAAMQKLREMIKEAWEPAKERKMRTGISKAGKEMR 102
            RSSGAGGQNVNK+ TKVE+RF ++ A W+P +VR RL  +++ RI + G + + SQE+RTQ QNR  A++KL ++++ +W   K RKMR G+S   KE R
Sbjct:   14 RSSGAGGQNVNKVETKVELRFHLDSASWIPAEVRERLKTNEANRINNDGFMSVNSQEYRTQVQNRKDALKKLEDILRNSWARPKVRKMRKGLSAKTKENR 113          
BLAST of mRNA_H-elongata_contig100911.83.1 vs. uniprot
Match: W7T6I3_9STRA (Peptidyl-trna hydrolase mitochondrial-like protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7T6I3_9STRA)

HSP 1 Score: 100 bits (250), Expect = 3.390e-24
Identity = 56/111 (50.45%), Postives = 76/111 (68.47%), Query Frame = 0
Query:    3 RSSGAGGQNVNKLSTKVEIRFVVEEAEWLPRDVRLRLARHQSGRITSRGELVITSQEFRTQKQNRHAAMQKLREMIKEAWEPAKERKMRTGISKAGKEMRLAEKHRRAKVK 113
            RSSG GGQNVNKL+T+VE+RF VE+A+W+P D+R R    Q  R+   GE V++SQE RTQ +NR   ++KL E +  A    K R MRTG+++  KE RL EK +R++ K
Sbjct:   93 RSSGPGGQNVNKLNTRVELRFHVEDADWIPEDMRHRFLEQQRHRVNKLGEFVLSSQEHRTQLKNREECVRKLEEALTRAAVVPKRRNMRTGLTEWEKENRLREKKKRSEKK 203          
BLAST of mRNA_H-elongata_contig100911.83.1 vs. uniprot
Match: A0A6U3Q7S5_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3Q7S5_9STRA)

HSP 1 Score: 102 bits (253), Expect = 7.260e-24
Identity = 56/112 (50.00%), Postives = 74/112 (66.07%), Query Frame = 0
Query:    3 RSSGAGGQNVNKLSTKVEIRFVVEEAEWLPRDVRLRLARHQSGRITSRGELVITSQEFRTQKQNRHAAMQKLREMIKEAWEPAKERKMRTGISKAGKEMRLAEKHRRAKVKQ 114
            RSSGAGGQNVNKLSTKVE+RF V  A W+P +VR RL+   + R+   G + + SQEFRTQ  N+   + KL +++  A+   K RKMR G+S+A K   L +K RR+  KQ
Sbjct:  186 RSSGAGGQNVNKLSTKVELRFHVSSANWIPFEVRQRLSSQNANRMNKEGYMTLNSQEFRTQAMNKKDVVNKLEDLVLLAYPRPKVRKMRKGVSQAAKRRNLEDKKRRSSTKQ 297          
BLAST of mRNA_H-elongata_contig100911.83.1 vs. uniprot
Match: A0A7S1D533_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1D533_CYCTE)

HSP 1 Score: 100 bits (249), Expect = 1.430e-23
Identity = 57/111 (51.35%), Postives = 75/111 (67.57%), Query Frame = 0
Query:    3 RSSGAGGQNVNKLSTKVEIRFVVEEAEWLPRDVRLRLARHQSGRITSRGELVITSQEFRTQKQNRHAAMQKLREMIKEAWEPAKERKMRTGISKAGKEMRLAEKHRRAKVK 113
            RS G+GGQNVNK++TKVE+RF +++A+WLP +VR R+      RI   G   I S E RTQ+QNR AA  KL+E++  A+   K RK+R GISK  KE  L +K RR +VK
Sbjct:  145 RSGGSGGQNVNKVNTKVELRFKLDDADWLPDEVRDRIREQAPNRINKDGVFNIQSSENRTQQQNRRAAFTKLQEIVLRAYPRPKVRKLRKGISKKAKERNLEDKKRRGQVK 255          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig100911.83.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LC14_ECTSI4.630e-4674.77RF_PROK_I domain-containing protein n=1 Tax=Ectoca... [more]
A0A8J5Y1J9_DIALT1.020e-2650.89RF_PROK_I domain-containing protein n=1 Tax=Diacro... [more]
A0A1Z5KKA6_FISSO3.680e-2653.57Peptidyl-tRNA hydrolase ICT1 n=1 Tax=Fistulifera s... [more]
A0A1Z5KFY9_FISSO3.770e-2654.05Peptidyl-tRNA hydrolase ICT1 n=1 Tax=Fistulifera s... [more]
A0A7S2PK85_9STRA1.350e-2553.00Hypothetical protein n=1 Tax=Skeletonema marinoi T... [more]
K0R9L2_THAOC1.510e-2450.00RF_PROK_I domain-containing protein n=2 Tax=Thalas... [more]
B8C3Q8_THAPS3.370e-2451.00RF_PROK_I domain-containing protein (Fragment) n=1... [more]
W7T6I3_9STRA3.390e-2450.45Peptidyl-trna hydrolase mitochondrial-like protein... [more]
A0A6U3Q7S5_9STRA7.260e-2450.00Hypothetical protein n=2 Tax=Ditylum brightwellii ... [more]
A0A7S1D533_CYCTE1.430e-2351.35Hypothetical protein n=1 Tax=Cyclophora tenuis Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000352Peptide chain release factor class IPFAMPF00472RF-1coord: 2..114
e-value: 4.7E-21
score: 74.9
IPR000352Peptide chain release factor class IPROSITEPS00745RF_PROK_Icoord: 3..19
NoneNo IPR availableGENE3D3.30.160.20coord: 1..114
e-value: 3.7E-36
score: 125.9
NoneNo IPR availablePANTHERPTHR11075PEPTIDE CHAIN RELEASE FACTORcoord: 3..114
NoneNo IPR availableSUPERFAMILY110916Peptidyl-tRNA hydrolase domain-likecoord: 3..85

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig100911contigH-elongata_contig100911:810..1511 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig100911.83.1mRNA_H-elongata_contig100911.83.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig100911 810..1511 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig100911.83.1 ID=prot_H-elongata_contig100911.83.1|Name=mRNA_H-elongata_contig100911.83.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=114bp
LFRSSGAGGQNVNKLSTKVEIRFVVEEAEWLPRDVRLRLARHQSGRITSR
GELVITSQEFRTQKQNRHAAMQKLREMIKEAWEPAKERKMRTGISKAGKE
MRLAEKHRRAKVKQ
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000352Pep_chain_release_fac_I