prot_H-elongata_contig100506.51.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig100506.51.1
Unique Nameprot_H-elongata_contig100506.51.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length200
Homology
BLAST of mRNA_H-elongata_contig100506.51.1 vs. uniprot
Match: D8LIB0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIB0_ECTSI)

HSP 1 Score: 276 bits (705), Expect = 5.650e-89
Identity = 134/200 (67.00%), Postives = 161/200 (80.50%), Query Frame = 0
Query:    1 FIVYRVWVFFPQEIHGTFGLMAALAVAATQHDPKGSFLPNGRAAWFPMRYFPLLLVTASATTRAFSIPLVSQDFPFVVVGAFSAWVYLRFFAHIVVGGPSGDISDEFRLVVFFPPVLHCVVKPLGDFTYGVFLLLGFFKGREARVPLSAVDGQGGIDPSTVAILPPPEKKDPIAERRRARAMKLLDEKFAKLNSKPVNRY 200
            +IV R       E+HG+FG++AALAVAA Q D   + LP GRA WFP RY PLLLVTASA  RA S+P+V++DFPFVVVGA+++WVYLRFFAH+V+G PSGD++++F+LV FFP     VVKP+ DFTYGVFLLLG FKGR AR+P+S VDGQGG+DP  VA LP P +KDPIAERRRARAMKLLDEKFA LN+KP NR+
Sbjct:  117 YIVTRQEYLLDLELHGSFGVLAALAVAAAQQDASATLLPAGRAPWFPTRYLPLLLVTASAMCRALSVPVVAKDFPFVVVGAYASWVYLRFFAHLVLGAPSGDVTEDFQLVNFFPLPCRRVVKPMCDFTYGVFLLLGCFKGRAARLPVSVVDGQGGVDPLVVATLPTPARKDPIAERRRARAMKLLDEKFATLNAKPANRW 316          
BLAST of mRNA_H-elongata_contig100506.51.1 vs. uniprot
Match: A0A836CJN9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJN9_9STRA)

HSP 1 Score: 124 bits (311), Expect = 4.380e-30
Identity = 79/205 (38.54%), Postives = 103/205 (50.24%), Query Frame = 0
Query:   13 EIHGTFGLMAALAVAATQHDPKGSFLPNGRAAWFPMRYFPLLLVTASATTRAFSIPLVSQDFPFVVVGAFSAWVYLRFF--------AHIVVGGPS-----GDISDEFRLVVFFPPVLHCVVKPLGDFTYGVFLLLGFFKGR-----EARV-PLSAVDGQGGIDPSTVAILPPPEKKDPIAERRRARAMKLLDEKFAKLNSKPVN 198
            E+HG +GL+ ALAVA     P            F +R+ P+  +T S       +  +S DFPFV VG+++ WVYLRFF        A +  G        GD+SD F L +F PP     ++PL DF YGV LLLG F+ R      AR+   S                     +DP+AERRRARAMKLLDEKFA+L++   N
Sbjct:  125 EVHGAWGLVCALAVAFAHALPLEPLFAPPALRGFKVRHLPVTAITLSGILYGAGLRAMSTDFPFVCVGSYAGWVYLRFFHTFPPVAAATLPPGAAPTATIPGDVSDAFALAMFLPPFTRRWLRPLADFVYGVALLLGLFRARAEYAAHARLLRASXXXXXXXXXXXXXXXXXXXRARDPVAERRRARAMKLLDEKFAQLSAAEEN 329          
BLAST of mRNA_H-elongata_contig100506.51.1 vs. uniprot
Match: A0A2D4CBN0_PYTIN (Uncharacterized protein n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CBN0_PYTIN)

HSP 1 Score: 103 bits (257), Expect = 3.560e-23
Identity = 75/206 (36.41%), Postives = 105/206 (50.97%), Query Frame = 0
Query:    1 FIVYRVWVFFPQEIHGTFGLMAALAVAATQHDPKGSFLPNGRAAWFP---MRYFPLL---------LVTASATTRAFSIPLVSQDFPFVVVGAFSAWVYLRFFAHIVVGGPSGDISDEFRLVVFFPPVLHCVVKPLGDFTYGVFLLLGFFKGREARVPLSAVDGQGGIDPSTVAILPPPEKKDPIAERRRARAMKLLDEKFAKLNS 194
            +I++R  +F    + G  G   AL VA  +  P  +      +A FP   +R++PLL         LV   A+++   + L+    P+ V+GA+  W YLRFF +       GDIS+EF LVV FP     VV P+ +F++ V  L G+FK R A+              S + I+      DPIAERR+ARAMK LDEK AKL S
Sbjct:  109 YIIFRAPIFLKTSLSGFAGGFTALLVAYMKPTPHAT------SAMFPTIKLRFYPLLAVLFFSLCTLVAMGASSKPLRVSLIGAG-PYSVLGAYLGWYYLRFF-NKNADRSVGDISEEFGLVVLFPDCCASVVGPVANFSFSVAKLCGYFKNRSAKAA------------SALPIVTD-ASNDPIAERRKARAMKALDEKLAKLAS 293          
BLAST of mRNA_H-elongata_contig100506.51.1 vs. uniprot
Match: A0A7S2CKW4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CKW4_9STRA)

HSP 1 Score: 103 bits (256), Expect = 8.280e-23
Identity = 64/190 (33.68%), Postives = 99/190 (52.11%), Query Frame = 0
Query:    1 FIVYRVWVFFPQEIHGTFGLMAALAVAATQHDPKGSFLPNGRAAWFPMRYFPLLLVTASATTRAFSIPLVSQDFPFVVVGAFSAWVYLRFFAHIVVGGPSGDISDEFRLVVFFPPVLHCVVKPLGDFTYGVFLLLGFFKGREARVPLSAVDGQGGIDPSTVAILPPPEKKDPIAERRRARAMKLLDEKFA 190
            F+V R+      + +G  GL+ ALAV      P+ + LP   +      + P+LL   S      +I   ++D PFVV+G +++W YLRF  H    G  G++S++F  +  FPP     + P  +FTYGV  LLG+FK R   +       +  + P+++     P+  DP+AERRRA+A + LD K A
Sbjct:  143 FVVTRMETVLFMQTYGFGGLIGALAVGLKLIAPRETPLPTVPS--LKCHHLPMLLGIVSLFCWTLNITAFAKDTPFVVIGIYASWWYLRF-VHKGRDGLVGNVSEDFAFITLFPPACRRYLSPFAEFTYGVACLLGYFKERRPALAGMPSTEETPLVPASLL----PQVHDPVAERRRAKAREQLDAKLA 325          
BLAST of mRNA_H-elongata_contig100506.51.1 vs. uniprot
Match: A0A024GA42_9STRA (Uncharacterized protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GA42_9STRA)

HSP 1 Score: 101 bits (252), Expect = 1.680e-22
Identity = 72/187 (38.50%), Postives = 98/187 (52.41%), Query Frame = 0
Query:   16 GTFGLMAALAVAATQHDPKGSFLPNGRAAWFPMRYFPLLLV------TASATTRAFSIPL----VSQDFPFVVVGAFSAWVYLRFFAHIVVGGPSGDISDEFRLVVFFPPVLHCVVKPLGDFTYGVFLLLGFFKGREARVPLSAVDGQGGIDPSTVAILPPPEKKDPIAERRRARAMKLLDEKFAKL 192
            G+ G ++ L VA  +       +    A++  MR++P  LV      T+       S+PL    VS   P+   G +  W YLRF  H+    P GDIS+EF+L V FP  +   V  +G F++GV  L G+FK R  ++  SA+       P TV     PEK DP+AERR+ARAMK LDEK AKL
Sbjct:  127 GSMGTISGLLVALMKPQFNEQIV---NASFLKMRFYPFTLVLCAWFLTSLGIAFVHSMPLHSVLVSMG-PYASSGVYLGWFYLRFL-HLTPDEPLGDISEEFKLSVLFPQQMAGYVNAIGSFSFGVARLCGYFKKRPKKLGQSAL-------PFTVE----PEKIDPVAERRKARAMKALDEKLAKL 297          
BLAST of mRNA_H-elongata_contig100506.51.1 vs. uniprot
Match: A0A3F2RU99_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RU99_9STRA)

HSP 1 Score: 95.9 bits (237), Expect = 3.010e-20
Identity = 78/205 (38.05%), Postives = 98/205 (47.80%), Query Frame = 0
Query:    1 FIVYRVWVFFPQEIHGTFGLMAALAVAATQHDPKGSFLPNGRAAWFP---MRYFPL----------LLVTASATTRAFSIPLVSQDFPFVVVGAFSAWVYLRFFAHIVVGGPSGDISDEFRLVVFFPPVLHCVVKPLGDFTYGVFLLLGFFKGREARVPLSAVDGQGGIDPSTVAILPPPEKKDPIAERRRARAMKLLDEKFAKL 192
            +IV+R  ++      G  G + AL VA  +  P  +      A  FP   +RY+PL          +   A +   A SI LVS   PF V+G F  W YLRF  +       GD+SDEF L+V  P     V+ PL +F + V  L GFFK R A+ P           P    I     K DPIAERR+ARAMK LDEK AKL
Sbjct:  109 YIVFRDPIYLEANFSGFTGGITALLVAYMKPTPYAA------APLFPGVQLRYYPLVASGVFSFCSIFGLAFSAGPAVSIMLVSAG-PFSVLGGFFGWYYLRFL-NKNRDQTVGDVSDEFALIVLLPDFSKPVIGPLANFCFSVVKLCGFFKKRAAQKPKML--------PILTEI-----KNDPIAERRKARAMKALDEKLAKL 292          
BLAST of mRNA_H-elongata_contig100506.51.1 vs. uniprot
Match: A0A485KCW3_9STRA (Aste57867_5077 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KCW3_9STRA)

HSP 1 Score: 94.7 bits (234), Expect = 7.530e-20
Identity = 69/199 (34.67%), Postives = 95/199 (47.74%), Query Frame = 0
Query:    1 FIVYRVWVFFPQEIHGTFGLMAALAVAATQHDPKGSFLPNGRAAWFPMRYFPLLLVTASAT-------TRAFSIPLVSQDFPFVVVGAFSAWVYLRFFAHIVVGGPSGDISDEFRLVVFFPPVLHCVVKPLGDFTYGVFLLLGFFKGREARVPLSAVDGQGGIDPSTVAILPPPEKKDPIAERRRARAMKLLDEKFAKL 192
            +I++R   F    + G  G + A+ VA  + +P  + +    +     RY+PL++     T       TRA  I +V    P+ + G +  W YLRF A     G  GD SD F L V FPP L   ++P+ D  + V  L G F  R+A    S           TVA+       DP+AERR+ARAMK LDEK AKL
Sbjct:  113 YIIFRNPFFLRTGVSGFTGGLVAMLVALAKENPMQTLVVPKLSC----RYYPLIVTLVCLTLSFLAVFTRA-EILIVGAG-PYALSGFYFGWFYLRFLAKNA-DGSVGDTSDAFSLAVLFPPFLRTTIQPICDLVFNVARLCGLFSNRDAAAAASL---------PTVAVA-----SDPVAERRKARAMKALDEKLAKL 290          
BLAST of mRNA_H-elongata_contig100506.51.1 vs. uniprot
Match: A0A024US08_9STRA (Uncharacterized protein n=3 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024US08_9STRA)

HSP 1 Score: 94.0 bits (232), Expect = 1.590e-19
Identity = 69/199 (34.67%), Postives = 94/199 (47.24%), Query Frame = 0
Query:    1 FIVYRVWVFFPQEIHGTFGLMAALAVAATQHDP-KGSFLPNGRAAWFPMRYFPLLL------VTASATTRAFSIPLVSQDFPFVVVGAFSAWVYLRFFAHIVVGGPSGDISDEFRLVVFFPPVLHCVVKPLGDFTYGVFLLLGFFKGREARVPLSAVDGQGGIDPSTVAILPPPEKKDPIAERRRARAMKLLDEKFAKL 192
            +IV+R   F    + G  G + A+ VA  + +P +   +P       P RY+PL+L      ++  A      I +V    P+ V G +  W YLRF A     G  GD S+ F L V FP  L   + P+ DF + V  L G FK R+A+              +  A LP     DP+ ERR+ARAMK LDEK AKL
Sbjct:  113 YIVFRNAFFLRTGVSGFTGGLVAMLVALVKENPVQALVIPK-----VPCRYYPLMLTVLCLAMSIGAVLTKAEILIVGAG-PYAVSGLYFGWFYLRFIAKNA-DGSKGDTSEAFSLTVLFPSFLKPSLAPIFDFFFNVAKLCGLFKYRDAQ--------------AAAASLPKTFPSDPVTERRKARAMKALDEKLAKL 290          
BLAST of mRNA_H-elongata_contig100506.51.1 vs. uniprot
Match: W4H9H0_9STRA (Uncharacterized protein n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=W4H9H0_9STRA)

HSP 1 Score: 92.8 bits (229), Expect = 4.500e-19
Identity = 72/203 (35.47%), Postives = 95/203 (46.80%), Query Frame = 0
Query:    1 FIVYRVWVFFPQEIHGTFGLMAALAVAATQHDPKGSF-LPNGRAAWFPMRYFPLLL------VTASATTRAFSIPLVSQDFPFVVVGAFSAWVYLRFFAHIVVGGPSGDISDEFRLVVFFPPVLHCVVKPLGDFTYGVFLLLGFFKGREARVPLSAVDGQGGIDPSTVAILPPPEKKDPIAERRRARAMKLLDEKFAKLNSKP 196
            +IV+R   F    + G  G + A+ VA  + +P     +P       P RY+PLLL      ++  A      I +V    P+ V G +  WVYLRF A     G  GD SD F L V FP  L   + PL DF + V  L GFF+ R+        +   G   +  A+       DP+ ERR+ARAMK LDEK AKL   P
Sbjct:  113 YIVFRSPFFLRTGVSGFTGGLVAMLVALVKENPVQPLGIPK-----LPCRYYPLLLTVLCVAMSVGAVLTKNEILIVGAG-PYAVSGLYFGWVYLRFVAKNP-DGSVGDESDAFSLTVLFPAFLKPSLAPLFDFCFNVSKLCGFFQHRQGH------NATSGSSLAKAALA-----SDPVTERRKARAMKALDEKLAKLAVMP 297          
BLAST of mRNA_H-elongata_contig100506.51.1 vs. uniprot
Match: M4BRC3_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BRC3_HYAAE)

HSP 1 Score: 92.4 bits (228), Expect = 5.850e-19
Identity = 74/203 (36.45%), Postives = 99/203 (48.77%), Query Frame = 0
Query:    1 FIVYRVWVFFPQEIHGTFGLMAALAVAATQHDP--KGSFLPNGRAAWFPMRYFPLLL-VTASATTRA----FSIPLVSQDF----PFVVVGAFSAWVYLRFFAHIVVGGPSGDISDEFRLVVFFPPVLHCVVKPLGDFTYGVFLLLGFFKGREARVPLSAVDGQGGIDPSTVAILPPPEKKDPIAERRRARAMKLLDEKFAKL 192
            ++V+R  ++  +   G  G + AL VA  +  P    S  P       P+R +PL+  V  S  T A     ++P VS       PF V+G +  W YLRF  +       GD+S+EF LV+  P V   +V PL +F + V  L GFFK R A+ P           P    I     K DPIAERR+ARAM+ LDEK AKL
Sbjct:  109 YVVFRDPIYLEKSFSGFTGGITALLVAFMKPTPLATASLFPG-----VPLRCYPLIACVVFSLCTLAGMMFTAVPAVSSILVSAGPFSVLGGYFGWYYLRFL-NKNRDRTVGDVSNEFALVILLPDVCTPLVSPLANFCFNVVKLCGFFKKRAAQKPKML--------PILTEI-----KNDPIAERRKARAMRALDEKLAKL 292          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig100506.51.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LIB0_ECTSI5.650e-8967.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A836CJN9_9STRA4.380e-3038.54Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A2D4CBN0_PYTIN3.560e-2336.41Uncharacterized protein n=2 Tax=Pythium insidiosum... [more]
A0A7S2CKW4_9STRA8.280e-2333.68Hypothetical protein (Fragment) n=1 Tax=Florenciel... [more]
A0A024GA42_9STRA1.680e-2238.50Uncharacterized protein n=1 Tax=Albugo candida Tax... [more]
A0A3F2RU99_9STRA3.010e-2038.05Uncharacterized protein n=3 Tax=Phytophthora kerno... [more]
A0A485KCW3_9STRA7.530e-2034.67Aste57867_5077 protein n=1 Tax=Aphanomyces stellat... [more]
A0A024US08_9STRA1.590e-1934.67Uncharacterized protein n=3 Tax=Aphanomyces invada... [more]
W4H9H0_9STRA4.500e-1935.47Uncharacterized protein n=3 Tax=Aphanomyces astaci... [more]
M4BRC3_HYAAE5.850e-1936.45Uncharacterized protein n=1 Tax=Hyaloperonospora a... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR13377:SF3TRANSMEMBRANE PROTEIN 115coord: 8..191
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 30..49
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 50..70
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 71..75
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 6..29
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 97..200
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..5
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 76..96
NoneNo IPR availableTMHMMTMhelixcoord: 74..96
NoneNo IPR availableTMHMMTMhelixcoord: 7..29
NoneNo IPR availableTMHMMTMhelixcoord: 49..67
NoneNo IPR availableTMHMMTMhelixcoord: 116..138
IPR013861TMEM115/Pdh1/Rbl19PANTHERPTHR13377PLACENTAL PROTEIN 6coord: 8..191

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig100506contigH-elongata_contig100506:213..2128 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig100506.51.1mRNA_H-elongata_contig100506.51.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig100506 213..2128 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig100506.51.1 ID=prot_H-elongata_contig100506.51.1|Name=mRNA_H-elongata_contig100506.51.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=200bp
FIVYRVWVFFPQEIHGTFGLMAALAVAATQHDPKGSFLPNGRAAWFPMRY
FPLLLVTASATTRAFSIPLVSQDFPFVVVGAFSAWVYLRFFAHIVVGGPS
GDISDEFRLVVFFPPVLHCVVKPLGDFTYGVFLLLGFFKGREARVPLSAV
DGQGGIDPSTVAILPPPEKKDPIAERRRARAMKLLDEKFAKLNSKPVNRY
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013861TMEM115/Pdh1/Rbl19