prot_H-elongata_contig100445.45.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig100445.45.1
Unique Nameprot_H-elongata_contig100445.45.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length225
Homology
BLAST of mRNA_H-elongata_contig100445.45.1 vs. uniprot
Match: A0A6H5KHA4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KHA4_9PHAE)

HSP 1 Score: 322 bits (826), Expect = 1.520e-108
Identity = 163/232 (70.26%), Postives = 188/232 (81.03%), Query Frame = 0
Query:    1 RCSATPVRLTADSPLRFVAAGHAVIPWSFPGYFGNSKAWLKFLDETHVRYYAELRDPSSGTVLAKHELVSLAQHPSRDVAALGFKDEDDALG------DIRSRGLPFRALTLRQRLLGEKDSLKIVGYEVRERSGAEA-GEDPNMVMIRAKGELAARTAKQAFVRTNHATLNPGMCGGAVLDANLELCGCVEGVVPTAPPEAEEVDPQVRALQGMPCVVEWKDLDSLLRATM 225
            RCSATPVR T  SPLRF+AA HAV+PW+FPGY   S AWLKF+DET+VRYYAELRDP +G VLA+HEL+SLA+HPSRD+AALG K  DD  G      D+ S+G+PF  L LR+RL+   +SL+IVGYEVRE+ G    GEDP M+M+RAKG+LAARTA QAFV T HATLNPGMCG AVLD++ ELCGCVEGVVPTAPPEA  V+  VRALQGMPCVVEWKDLD+LL ATM
Sbjct:   23 RCSATPVRQTTSSPLRFLAAAHAVVPWAFPGYHDESHAWLKFIDETNVRYYAELRDPFTGAVLAQHELISLARHPSRDMAALGLKGGDDGDGESRFLRDVGSKGIPFSPLPLRRRLIEPSESLRIVGYEVREQPGGLGQGEDPGMMMVRAKGDLAARTAMQAFVGTEHATLNPGMCGAAVLDSDFELCGCVEGVVPTAPPEAA-VEAHVRALQGMPCVVEWKDLDTLLTATM 253          
BLAST of mRNA_H-elongata_contig100445.45.1 vs. uniprot
Match: D7G6F8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6F8_ECTSI)

HSP 1 Score: 175 bits (444), Expect = 2.360e-52
Identity = 90/122 (73.77%), Postives = 104/122 (85.25%), Query Frame = 0
Query:  105 TLRQRLLGEKDSLKIVGYEVRERSGAEA-GEDPNMVMIRAKGELAARTAKQAFVRTNHATLNPGMCGGAVLDANLELCGCVEGVVPTAPPEAEEVDPQVRALQGMPCVVEWKDLDSLLRATM 225
            +LR+RL+   +SL+IVGYEVRE+ G    GEDP M+++RAKG+LAARTA QAFV T HATLNPGMCG AVLD++ ELCGCVEGVVPTAPPEAE V+  VRALQGMPCVVEWKDLD+LL ATM
Sbjct:   24 SLRRRLIDPSESLRIVGYEVREQPGGLGQGEDPGMMIVRAKGDLAARTAMQAFVGTEHATLNPGMCGAAVLDSDFELCGCVEGVVPTAPPEAE-VEAHVRALQGMPCVVEWKDLDTLLTATM 144          
BLAST of mRNA_H-elongata_contig100445.45.1 vs. uniprot
Match: A0A7S2CK26_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CK26_9STRA)

HSP 1 Score: 82.0 bits (201), Expect = 2.230e-15
Identity = 57/208 (27.40%), Postives = 102/208 (49.04%), Query Frame = 0
Query:   17 FVAAGHAVIPWSFPGYFGNSKAWLKFLDETHVRYYAELRDPSSGTVLAKHEL-VSLAQHPSRDVAALGFKDEDDALGDIRSRGLPFRALTLRQRLLGEKDSLKIVGYEVRERSGAEAGEDPNMVMIRAKGELAARTAKQAFVRTNHATLNPGMCGGAVLDANLELCGCVEGVVPTAPPEAEEVDPQVRALQGMPCVVEWKDLDSLLRA 223
            F+ + H V PW +  Y+     W++ ++ ++ +Y  E+RD  +G V   H L +    H + D+A L  +   D   ++ +   P   L L  R L E   ++++G+E+ +  G +  +    +     G +  RT+ ++F++T    L  GMCGG VLD +L+  G +EG+VP +       +  +  L G    VE  +L S LR+
Sbjct:   38 FLTSSHVVAPWKWRNYYPQD--WIEHVNASNTKYSIEIRDRETGRVRLSHSLELPAVCHETLDIAMLEHQPWSD---EVMAHMEP---LQLASRQLEEGQDVRVMGHEIVDEPGDDIDDVREQLPRDVPGRMLRRTSGRSFIKTA-TVLGDGMCGGPVLDPDLQCHGVIEGIVPPS-------NLALGDLAGAAAFVEATELTSWLRS 229          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig100445.45.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5KHA4_9PHAE1.520e-10870.26Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D7G6F8_ECTSI2.360e-5273.77Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S2CK26_9STRA2.230e-1527.40Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig100445contigH-elongata_contig100445:177..1369 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig100445.45.1mRNA_H-elongata_contig100445.45.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig100445 177..1369 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig100445.45.1 ID=prot_H-elongata_contig100445.45.1|Name=mRNA_H-elongata_contig100445.45.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=225bp
RCSATPVRLTADSPLRFVAAGHAVIPWSFPGYFGNSKAWLKFLDETHVRY
YAELRDPSSGTVLAKHELVSLAQHPSRDVAALGFKDEDDALGDIRSRGLP
FRALTLRQRLLGEKDSLKIVGYEVRERSGAEAGEDPNMVMIRAKGELAAR
TAKQAFVRTNHATLNPGMCGGAVLDANLELCGCVEGVVPTAPPEAEEVDP
QVRALQGMPCVVEWKDLDSLLRATM
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