prot_H-elongata_contig100233.29.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Homology

BLAST of mRNA_H-elongata_contig100233.29.1 vs. uniprot
Match: A0A6H5KC98_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KC98_9PHAE)

HSP 1 Score: 343 bits (881), Expect = 3.530e-102
Identity = 186/302 (61.59%), Postives = 201/302 (66.56%), Query Frame = 0

Query:    2 YANASHALAKLGVPVALPGGGRGAAPQQLHLQQTVQQLQATQHLATHRA-------------FNGGDRGSLPAATGSRRASTAVSKEAASCLPPCFMCGEDVTHWGMNAGNGEAIKCARDGCDRVFHVTCVAHLLRDAAACTPGGSGAAAGTWECPIHHCARCGVDENGLQLGASARQVPAGDI----HWGGRHG----GNERELGGNR------------SRRLWQCTWCSVAFCLSHLPPQLATAGRKARVADANQCVHCRSPSPRVKLAILLEKMCSRLANHHLAIPFLRPFLPGIASP 270
            Y N SHA AKLG+PVALP GGRGAAPQQLHLQQT+QQLQATQ+                                          + AA   PPCF+C +D+THWG NAGNGEAI CARDGC RVFHVTCVA+LL+DAAA TPGG GA AGTWECP+H CA CG DENGLQLG       AG +       GR G    G  R+ G               SRRLWQCTWCSVAFC+ HLP QLATAGRKARVADANQCVHCRSPSPRVKLAILLE MCSR+ANHHLAIPFLRPF+PGIASP
Sbjct:  465 YTNPSHAFAKLGIPVALPEGGRGAAPQQLHLQQTMQQLQATQNFGATATPQQQRHPXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRXAAELPPPCFICKDDITHWGPNAGNGEAISCARDGCGRVFHVTCVAYLLQDAAARTPGGCGAEAGTWECPLHRCACCGADENGLQLGEKKDISNAGLVVLAPPLAGRSGVSGVGGWRKSGXXXXXXXXXXXXXAGSRRLWQCTWCSVAFCMKHLPSQLATAGRKARVADANQCVHCRSPSPRVKLAILLEGMCSRIANHHLAIPFLRPFMPGIASP 766

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BLAST of mRNA_H-elongata_contig100233.29.1 vs. uniprot
Match: D8LPU7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPU7_ECTSI)

HSP 1 Score: 304 bits (778), Expect = 2.970e-88
Identity = 150/216 (69.44%), Postives = 163/216 (75.46%), Query Frame = 0

Query:   81 PPCFMCGEDVTHWGMNAGNGEAIKCARDGCDRVFHVTCVAHLLRDAAACTPGGSGAAAGTWECPIHHCARCGVDENGLQLGASARQVPAGDI----HWGGRHG----GNERELGGNR------------SRRLWQCTWCSVAFCLSHLPPQLATAGRKARVADANQCVHCRSPSPRVKLAILLEKMCSRLANHHLAIPFLRPFLPGIASPLKNEED 276
            PPCF+C +D+THWG NAGNGEAI CARDGC RVFHVTCVA+LL+DAAA TPGG GA AGTWECP+H CA CG DENGLQLG       AG +       GR G    G  R+ G               SRRLWQCTWCSVAFC+ HLPPQLATAGRKARVADANQCVHCRSPSPRVKLAILLE MCSR+ANHHLAIPFLRPF+PGIASP  ++ D
Sbjct:  433 PPCFICKDDITHWGPNAGNGEAISCARDGCGRVFHVTCVAYLLQDAAARTPGGCGAEAGTWECPLHRCACCGADENGLQLGEKKDSSNAGLVVLASPLSGRSGVSGVGGWRKSGXXXXXXXXXXXXXXGSRRLWQCTWCSVAFCMKHLPPQLATAGRKARVADANQCVHCRSPSPRVKLAILLEGMCSRIANHHLAIPFLRPFMPGIASPFGDDND 648

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BLAST of mRNA_H-elongata_contig100233.29.1 vs. uniprot
Match: A0A7S2GUQ6_9STRA (Hypothetical protein n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GUQ6_9STRA)

HSP 1 Score: 76.6 bits (187), Expect = 2.750e-11
Identity = 61/230 (26.52%), Postives = 93/230 (40.43%), Query Frame = 0

Query:   83 CFMCGEDVTHWGMNAGNGEAIKCARDGCDRVFHVTCVAHLLRDAAACTPGGS----GAAAGTWECPIHHCARCGVDENGLQLGASARQVPAGDIHWGGRHGGNERELGGNRSRRLWQCTWCSVAFCLSHLPPQL--------------------------------ATAGRKARVADAN----QCVHCRSPSPRVKLAILLEKMCSRLANHHLAIPFLRPFLPG--IASP 270
            C +CG            GE + C    C +VFH  CV       ++  P G     G   G W CP H+C  C        L + +R                      ++  +L++C+ C++++C  H+P +L                                ++A  K R A  +    +CV+C+ P  R  LA LLE   +R+ANH+LA+PFLRP+L G  +ASP
Sbjct:   48 CMVCG----------CQGELMLCDYPDCQKVFHKACVWP-----SSLGPAGGLSIDGRTTGEWICPRHYCCIC--------LSSESRD---------------------DQDFQLYKCSDCTISYCEHHVPDELIPGLNKGSGLDNNKATLRNSQTQACSHSHSQCSSAAEKTRAAGRSSEKFKCVYCKEPKARTILARLLESAWARMANHYLALPFLRPYLSGHQMASP 233

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BLAST of mRNA_H-elongata_contig100233.29.1 vs. uniprot
Match: A0A7S2SAQ8_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SAQ8_9STRA)

HSP 1 Score: 68.2 bits (165), Expect = 1.680e-8
Identity = 56/196 (28.57%), Postives = 78/196 (39.80%), Query Frame = 0

Query:   72 VSKEAASCLPP---CFMCGEDVTHWGMNAGNGEAIKCARDGCDRVFHVTCVAHLLRDAAACTPGGSGAAAGTWECPIHHCARCGVDENGLQLGASARQVPAGDIHWGGRHGGNERELGGNRSRRLWQCTWCSVAFCLSHLPPQLATAGRKARVADANQCVHCRSPSPRVKLAILLEKMCSRLANHHLAIPFLRPFL 264
            V+K A+   P    C +C           G G  + C   GC +VFH  C   L     +  P  S  A   W C  H CA CG +E+           PA                         +C  C+++FC  H    +   G   R +   +C  C + SPRV LA +L +  + +ANH+LA+PFLRP L
Sbjct:  230 VNKTASEATPSEESCALC----------CGTGTLLVCDFPGCPKVFHRMCAWPL-----SILPVESPDA--PWFCQRHTCAICGAEED-----------PALPFD---------------------KCETCTISFCAEHRLQGIPEGGALGRPSSRFRCPCCDADSPRVGLAKILFQAWATIANHYLALPFLRPLL 376

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BLAST of mRNA_H-elongata_contig100233.29.1 vs. uniprot
Match: A0A397FHH6_9STRA (PHD domain-containing protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397FHH6_9STRA)

HSP 1 Score: 64.3 bits (155), Expect = 6.990e-8
Identity = 50/190 (26.32%), Postives = 72/190 (37.89%), Query Frame = 0

Query:   83 CFMCGEDVTHWGMNAGNGEAIKCARDGCDRVFHVTCVAHLLRDAAACTPGGSGAAAGTWECPIHHCARCGVDENGLQLGASARQVPAGDIHWGGRHGGNERELGGNRSRRLWQCTWCSVAFCLSHLP--PQLATAGRKARVADANQCVHCRSPSPRVKLAILLEKMCSRLANHHLAIPFLRPFLPGIASP 270
            CF+CG            GE + C    C +V+H  C+          T          W CP H C   G  E  +Q                              ++ +W C  C VA   + LP  P L+   R+ +      C HC +PSP+V+LA +LE++ S +A +   +PF  P L GI  P
Sbjct:   39 CFLCGL----------GGELVVCEFPRCTKVYHQLCLGAFPFPTDEDTE---------WICPRHSCVLSGRKEPPVQTS----------------------------TKSIWHCLHCPVAVDDTVLPSHPALSKISRREKTMV---CPHCNAPSPKVRLAKILERIWSVIATNRQGMPFCGPLLVGIDRP 178

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BLAST of mRNA_H-elongata_contig100233.29.1 vs. uniprot
Match: A0A3L6VEF1_9STRA (PHD-type domain-containing protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3L6VEF1_9STRA)

HSP 1 Score: 64.7 bits (156), Expect = 1.330e-7
Identity = 50/190 (26.32%), Postives = 72/190 (37.89%), Query Frame = 0

Query:   83 CFMCGEDVTHWGMNAGNGEAIKCARDGCDRVFHVTCVAHLLRDAAACTPGGSGAAAGTWECPIHHCARCGVDENGLQLGASARQVPAGDIHWGGRHGGNERELGGNRSRRLWQCTWCSVAFCLSHLP--PQLATAGRKARVADANQCVHCRSPSPRVKLAILLEKMCSRLANHHLAIPFLRPFLPGIASP 270
            CF+CG            GE + C    C +V+H  C+          T          W CP H C   G  E  +Q                              ++ +W C  C VA   + LP  P L+   R+ +      C HC +PSP+V+LA +LE++ S +A +   +PF  P L GI  P
Sbjct:  189 CFLCGL----------GGELVVCEFPRCTKVYHQLCLGAFPFPTDEDTE---------WVCPRHSCVLSGRKEPPVQTS----------------------------TKSIWHCLHCPVAVDDTVLPSHPALSKISRREKTMV---CPHCNAPSPKVRLAKILERIWSVIATNRQGMPFCGPLLVGIDRP 328

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BLAST of mRNA_H-elongata_contig100233.29.1 vs. uniprot
Match: A0A6G0X3E3_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0X3E3_9STRA)

HSP 1 Score: 65.1 bits (157), Expect = 1.610e-7
Identity = 50/188 (26.60%), Postives = 70/188 (37.23%), Query Frame = 0

Query:   83 CFMCGEDVTHWGMNAGNGEAIKCARDGCDRVFHVTCVAHLLRDAAACTPGGSGAAAGTWECPIHHCARCGVDENGLQLGASARQVPAGDIHWGGRHGGNERELGGNRSRRLWQCTWCSVAFCLSHLPPQLATAGRKARVADANQCVHCRSPSPRVKLAILLEKMCSRLANHHLAIPFLRPFLPGIASP 270
            CF+CG            GE + C    C +V+H  C+          T          W CP H C   G  EN +                               S+ +W C  C +    S LP   A + R ++      C HC +PSPRV+LA LLE++ S +A +   +PF  P L G+  P
Sbjct:  265 CFLCGL----------GGELVVCEFPRCTKVYHQLCLGAYPFPMDEETE---------WICPRHTCVISGRKENPMST---------------------------QTSKTMWHCLNCPIGVETSILPTHSALS-RHSKRDKTIICPHCNAPSPRVRLAKLLERIWSIVATNRQGMPFCGPLLVGVDRP 405

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BLAST of mRNA_H-elongata_contig100233.29.1 vs. uniprot
Match: A0A397DEQ7_9STRA (PHD-type domain-containing protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397DEQ7_9STRA)

HSP 1 Score: 64.7 bits (156), Expect = 1.890e-7
Identity = 53/197 (26.90%), Postives = 75/197 (38.07%), Query Frame = 0

Query:   83 CFMCGEDVTHWGMNAGNGEAIKCARDGCDRVFHVTCVAHLLRDAAACTPGGSGAAAGTWECPIHHCARCGVDENGLQLGASARQVPAGDIHWGGRHGGNERELGGNRSRRLWQCTWCSVAFCLSHLP--PQLATAGRKARVADANQCVHCRSPSPRVKLAILLEKMCSRLANHHLAIPFLRPFLPGIASPLKNEEDP 277
            CF+CG            GE + C    C +V+H  C+          T          W CP H C   G  E  +Q                              ++ +W C  C VA   + LP  P L+   R+ +      C HC +PSP+V+LA +LE++ S +A +   +PF  P L GI  P   E DP
Sbjct:  199 CFLCGL----------GGELVVCEFPRCTKVYHQLCLGAFPFPTDEDTE---------WICPRHSCVLSGRKEPPVQTS----------------------------TKSIWHCLHCPVAVDDTVLPSHPALSKISRREKTMV---CPHCNAPSPKVRLAKILERIWSVIATNRQGMPFCGPLLVGIDRPA--EMDP 343

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BLAST of mRNA_H-elongata_contig100233.29.1 vs. uniprot
Match: A0A3R7E4K7_9STRA (PHD-type domain-containing protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3R7E4K7_9STRA)

HSP 1 Score: 64.7 bits (156), Expect = 2.020e-7
Identity = 53/197 (26.90%), Postives = 75/197 (38.07%), Query Frame = 0

Query:   83 CFMCGEDVTHWGMNAGNGEAIKCARDGCDRVFHVTCVAHLLRDAAACTPGGSGAAAGTWECPIHHCARCGVDENGLQLGASARQVPAGDIHWGGRHGGNERELGGNRSRRLWQCTWCSVAFCLSHLP--PQLATAGRKARVADANQCVHCRSPSPRVKLAILLEKMCSRLANHHLAIPFLRPFLPGIASPLKNEEDP 277
            CF+CG            GE + C    C +V+H  C+          T          W CP H C   G  E  +Q                              ++ +W C  C VA   + LP  P L+   R+ +      C HC +PSP+V+LA +LE++ S +A +   +PF  P L GI  P   E DP
Sbjct:  464 CFLCGL----------GGELVVCEFPRCTKVYHQLCLGAFPFPTDEDTE---------WICPRHSCVLSGRKEPPVQTS----------------------------TKSIWHCLHCPVAVDDTVLPSHPALSKISRREKTMV---CPHCNAPSPKVRLAKILERIWSVIATNRQGMPFCGPLLVGIDRPA--EMDP 608

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BLAST of mRNA_H-elongata_contig100233.29.1 vs. uniprot
Match: A0A6A4ZHF3_9STRA (PHD-type domain-containing protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4ZHF3_9STRA)

HSP 1 Score: 64.7 bits (156), Expect = 2.090e-7
Identity = 50/190 (26.32%), Postives = 72/190 (37.89%), Query Frame = 0

Query:   83 CFMCGEDVTHWGMNAGNGEAIKCARDGCDRVFHVTCVAHLLRDAAACTPGGSGAAAGTWECPIHHCARCGVDENGLQLGASARQVPAGDIHWGGRHGGNERELGGNRSRRLWQCTWCSVAFCLSHLP--PQLATAGRKARVADANQCVHCRSPSPRVKLAILLEKMCSRLANHHLAIPFLRPFLPGIASP 270
            CF+CG            GE + C    C +V+H  C+          T          W CP H C   G  E  +Q                              ++ +W C  C VA   + LP  P L+   R+ +      C HC +PSP+V+LA +LE++ S +A +   +PF  P L GI  P
Sbjct:  197 CFLCGL----------GGELVVCEFPRCTKVYHQLCLGAFPFPTDEDTE---------WVCPRHSCVLSGRKEPPVQTS----------------------------TKSIWHCLHCPVAVDDTVLPSHPALSKISRREKTMV---CPHCNAPSPKVRLAKILERIWSVIATNRQGMPFCGPLLVGIDRP 336

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig100233.29.1 vs. uniprot

BLAST of mRNA_H-elongata_contig100233.29.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 12

ZOOM

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POSITION

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Match Name	E-value	Identity	Description
A0A6H5KC98_9PHAE	3.530e-102	61.59	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D8LPU7_ECTSI	2.970e-88	69.44	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A7S2GUQ6_9STRA	2.750e-11	26.52	Hypothetical protein n=2 Tax=Dictyocha speculum Ta...	[more]
A0A7S2SAQ8_9STRA	1.680e-8	28.57	Hypothetical protein n=1 Tax=Rhizochromulina marin...	[more]
A0A397FHH6_9STRA	6.990e-8	26.32	PHD domain-containing protein (Fragment) n=1 Tax=A...	[more]
A0A3L6VEF1_9STRA	1.330e-7	26.32	PHD-type domain-containing protein n=2 Tax=Aphanom...	[more]
A0A6G0X3E3_9STRA	1.610e-7	26.60	Uncharacterized protein n=1 Tax=Aphanomyces euteic...	[more]
A0A397DEQ7_9STRA	1.890e-7	26.90	PHD-type domain-containing protein n=1 Tax=Aphanom...	[more]
A0A3R7E4K7_9STRA	2.020e-7	26.90	PHD-type domain-containing protein n=2 Tax=Aphanom...	[more]
A0A6A4ZHF3_9STRA	2.090e-7	26.32	PHD-type domain-containing protein n=2 Tax=Aphanom...	[more]

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Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig100233.29.1 ID=prot_H-elongata_contig100233.29.1|Name=mRNA_H-elongata_contig100233.29.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=449bp
PYANASHALAKLGVPVALPGGGRGAAPQQLHLQQTVQQLQATQHLATHRA
FNGGDRGSLPAATGSRRASTAVSKEAASCLPPCFMCGEDVTHWGMNAGNG
EAIKCARDGCDRVFHVTCVAHLLRDAAACTPGGSGAAAGTWECPIHHCAR
CGVDENGLQLGASARQVPAGDIHWGGRHGGNERELGGNRSRRLWQCTWCS
VAFCLSHLPPQLATAGRKARVADANQCVHCRSPSPRVKLAILLEKMCSRL
ANHHLAIPFLRPFLPGIASPLKNEEDPAEASLGVSGLTAPQPGKAGKGQA
VTEASASVTTPEASTRGGDESDDLVVFDAEPIPIHPIKRHRVEWEGATAM
APSLKPRGLEGEVEATGVTVVGAVEAVGKIHVAQSVQSPQQAQGGGGRTR
KRSLPSAAMSRAGGCRSAKPVSSPLLPPRPDPEPSAAVGPVEGEPSGQ*