prot_H-elongata_contig100109.15.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig100109.15.1
Unique Nameprot_H-elongata_contig100109.15.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length292
Homology
BLAST of mRNA_H-elongata_contig100109.15.1 vs. uniprot
Match: A0A6H5KLV6_9PHAE (Helicase ATP-binding domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLV6_9PHAE)

HSP 1 Score: 285 bits (729), Expect = 1.440e-85
Identity = 179/386 (46.37%), Postives = 211/386 (54.66%), Query Frame = 0
Query:    6 SSLSAELLMPLEHFHGPTFHALLNEYRATNGRGVEKEAEAGGEGGLGAEDDGG-------------------------------ELTNCASADVTGTSTISRTGDIGSGXXXXXXXXXXSTPSLPIDAYREEILAHVRNNRVTVIHGETGSGKSSRLPIMLIEDALE-------------RGGS-----------------------------------------------GG--------PKPRMFVSQPRRAATRALADRVRGDSQRLGVKFGVAMRLGHGVREGPPKAEVTFATTGYIVRLIANSPGLLDSHTHLIIDEVHERSVDTDLLCFFAKRLLHTHPTLRLIVMSATMSARLVNNYYGMADPPLFVGAKRFPIRSVRV 292
            SS SAE +MP +HFHGPTFHALLNEYR  N                                                      +  N   AD  G  T  +  D  S           +   LPIDAYREEIL HVRNNRVTVIHGETGSGKS+R+P+ML+E+AL+             R G+                                               GG         +PRMFVSQPRRAATRAL +RVR +++R G  + V +RLGHGVREGPPKAEVTFATTGY+ RL+A++PG+LDSHTHLIIDEVHERSVDTDLLC FAKRL+ THPTLRLIVMSAT+SA L++ YYG+  PPLFVG++RFP+R V V
Sbjct:  526 SSCSAEFIMPRDHFHGPTFHALLNEYREENXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPDRGNTGGADAAGGMT--QPNDASS------PPVVDAAVPLPIDAYREEILEHVRNNRVTVIHGETGSGKSTRIPVMLVEEALDLIAEEAAAVAEAVREGAXXXXXXXXXXXXXXXXXXKNXXXXXXEAGVXXXXXXXXXXXXAESPAGGIAAAAPQVKRPRMFVSQPRRAATRALVERVRQEAERSGRGWSVGLRLGHGVREGPPKAEVTFATTGYLARLLASNPGVLDSHTHLIIDEVHERSVDTDLLCLFAKRLVETHPTLRLIVMSATLSANLLSKYYGLTSPPLFVGSRRFPVRQVYV 903          
BLAST of mRNA_H-elongata_contig100109.15.1 vs. uniprot
Match: D8LSM0_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSM0_ECTSI)

HSP 1 Score: 272 bits (696), Expect = 1.640e-79
Identity = 148/265 (55.85%), Postives = 173/265 (65.28%), Query Frame = 0
Query:   98 LPIDAYREEILAHVRNNRVTVIHGETGSGKSSRLPIMLIEDALE-------------------------------------RGGSGG---------------------------------PKPRMFVSQPRRAATRALADRVRGDSQRLGVKFGVAMRLGHGVREGPPKAEVTFATTGYIVRLIANSPGLLDSHTHLIIDEVHERSVDTDLLCFFAKRLLHTHPTLRLIVMSATMSARLVNNYYGMADPPLFVGAKRFPIRSVRV 292
            LPIDAYREEIL HVRNNRVTVIHGETGSGKS+R+P+ML+E+AL+                                       GSGG                                  +PRMFVSQPRRAATRAL  RVR +++R G  + V +RLGHGVREGPPKAEVTFATTGY+ RL+A++PG+LDSHTHLIIDEVHERSVDTDLLC FAKRL+ THPTLRLIVMSAT+SA L++ YYG+   PLFVG++RFP+R V V
Sbjct:  791 LPIDAYREEILEHVRNNRVTVIHGETGSGKSTRIPVMLVEEALDLIAEEAAAVAEXXXXXXXXXXXXXXXXXXXXXXXXSGTTGSGGGEEVGVQAGGEGXXXXXXXXXXXXXXXAAAPQVKRPRMFVSQPRRAATRALVQRVRQEAERSGRGWSVGLRLGHGVREGPPKAEVTFATTGYLARLLASNPGVLDSHTHLIIDEVHERSVDTDLLCLFAKRLVETHPTLRLIVMSATLSANLLSKYYGLTSSPLFVGSRRFPVRQVYV 1055          
BLAST of mRNA_H-elongata_contig100109.15.1 vs. uniprot
Match: K0RU78_THAOC (Uncharacterized protein (Fragment) n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0RU78_THAOC)

HSP 1 Score: 214 bits (545), Expect = 2.720e-59
Identity = 107/193 (55.44%), Postives = 138/193 (71.50%), Query Frame = 0
Query:   98 LPIDAYREEILAHVRNNRVTVIHGETGSGKSSRLPIMLIEDALERGGSGGPKPRMFVSQPRRAATRALADRVRGDSQRLGVKFGVAMRLGHGVREGPPK-AEVTFATTGYIVRLIANSPGLLDSHTHLIIDEVHERSVDTDLLCFFAKRLLHTHPTLRLIVMSATMSARLVNNYYGMADPPLFVGAKRFPIRS 289
            LPID +  EIL  VR  R+T+IHGETG GKSSR+P ML+  +     +  P+ +M VSQPRR A +ALA+RVR     L  K G  +R+GHG+RE   K     F TTGY+VRL+AN PG  D+H+HLIIDEVHERSVDTD+LC   +RLL++HPT+RL++MSATM+A L   Y+G+  PP+ VGA+RFPI+ 
Sbjct:  662 LPIDEHEGEILRAVRTQRITIIHGETGCGKSSRVPCMLLRASPPEPTATAPEVKMIVSQPRRIAAKALAERVRSCEPDLADKIG--LRMGHGIREYETKDTRAWFVTTGYVVRLLANHPGWFDTHSHLIIDEVHERSVDTDILCLLCRRLLNSHPTIRLVLMSATMAAELYQQYFGVPQPPIHVGARRFPIKE 852          
BLAST of mRNA_H-elongata_contig100109.15.1 vs. uniprot
Match: A0A7S4MMP8_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4MMP8_9STRA)

HSP 1 Score: 209 bits (533), Expect = 1.090e-57
Identity = 107/193 (55.44%), Postives = 136/193 (70.47%), Query Frame = 0
Query:   98 LPIDAYREEILAHVRNNRVTVIHGETGSGKSSRLPIMLIEDALERGGSGGPKPRMFVSQPRRAATRALADRVRGDSQRLGVKFGVAMRLGHGVREGP-PKAEVTFATTGYIVRLIANSPGLLDSHTHLIIDEVHERSVDTDLLCFFAKRLLHTHPTLRLIVMSATMSARLVNNYYGMADPPLFVGAKRFPIRS 289
            LPID + EEIL  +   RVT+I GETG GKSSR+P+ML+        S     +MF+SQPRR A ++LA+RVR     L  +  +A+R+GHGVRE   P     F TTGY+VRL+AN P    SHTHLIIDEVHERSVDTD+LC   +RLL THPT+RL++MSATM+A L  +Y+G  +PP+FVGA+RFPI+ 
Sbjct:  669 LPIDEHEEEILRTIAEQRVTIIQGETGCGKSSRVPVMLLRAPPPEPTSNARSVKMFISQPRRIAAKSLAERVRQCEPDL--RDCIALRMGHGVREYECPSTRAWFVTTGYLVRLLANHPKSFTSHTHLIIDEVHERSVDTDILCLLCRRLLTTHPTIRLVLMSATMAAALYRSYFGTPEPPIFVGARRFPIKE 859          
BLAST of mRNA_H-elongata_contig100109.15.1 vs. uniprot
Match: A0A7S2L2B3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2L2B3_9STRA)

HSP 1 Score: 200 bits (508), Expect = 1.320e-54
Identity = 103/193 (53.37%), Postives = 134/193 (69.43%), Query Frame = 0
Query:   98 LPIDAYREEILAHVRNNRVTVIHGETGSGKSSRLPIMLIEDALERGGSGGPKPRMFVSQPRRAATRALADRVRGDSQRLGVKFGVAMRLGHGVRE-GPPKAEVTFATTGYIVRLIANSPGLLDSHTHLIIDEVHERSVDTDLLCFFAKRLLHTHPTLRLIVMSATMSARLVNNYYGMADPPLFVGAKRFPIRS 289
            LPID +  EIL  ++  RVT+IHGETG GKSSR+P  L+     +     P+ +M VSQPRR A +ALA+RVR     L  K  +A+R+GHG++E    K    F TTGY+VRL+AN P   DSHTHLIIDEVHERSVD+D+LC   +RLLH+HPT+RL++MSAT++A L + Y+G A  P+ VG +RFPI  
Sbjct:  318 LPIDKHEREILNTIKTQRVTIIHGETGCGKSSRVPCFLLRAEPPQPSLAAPEVKMIVSQPRRIAAKALAERVRKVEPDLAHK--IALRMGHGMKEFETQKTRAWFVTTGYVVRLLANHPHWFDSHTHLIIDEVHERSVDSDILCLLCRRLLHSHPTIRLVLMSATLAADLYSQYFG-APQPIHVGVRRFPINE 507          
BLAST of mRNA_H-elongata_contig100109.15.1 vs. uniprot
Match: A0A7S3JYC1_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JYC1_9STRA)

HSP 1 Score: 200 bits (508), Expect = 2.220e-54
Identity = 103/188 (54.79%), Postives = 135/188 (71.81%), Query Frame = 0
Query:   98 LPIDAYREEILAHVRNNRVTVIHGETGSGKSSRLPIMLIEDALERGGSGGPKPRMFVSQPRRAATRALADRVRGDSQRLGVKFGVAMRLGHGVREGPPKAEVTFATTGYIVRLIANSPGLLDSHTHLIIDEVHERSVDTDLLCFFAKRLLHTHPTLRLIVMSATMSARLVNNYYGMADPPLFVGAKRF 285
            LPIDA++++IL HV  NRVT+I GETGSGKSSRLP+ML+        +   K RMFVSQPRR A ++L +RVR     +     + +RLGHG R+   +  V F TTGY+VRLIA+SP +L  HTHLIIDEVHERSVD +++C  A+RL+H+HP LRLIVMSAT+   L+ +Y+   +P +FVGA+RF
Sbjct:  510 LPIDAHQDKILEHVARNRVTIIIGETGSGKSSRLPVMLL--------NANKKNRMFVSQPRRIAAKSLCERVRSQ---VSNGHEIGLRLGHGERDEYKETRVWFCTTGYLVRLIASSPQVLRRHTHLIIDEVHERSVDAEVICLLARRLIHSHPNLRLIVMSATLCTELLADYFCTVEPHVFVGARRF 686          
BLAST of mRNA_H-elongata_contig100109.15.1 vs. uniprot
Match: A0A7S2SUV2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SUV2_9STRA)

HSP 1 Score: 182 bits (463), Expect = 5.240e-53
Identity = 99/192 (51.56%), Postives = 129/192 (67.19%), Query Frame = 0
Query:   98 LPIDAYREEILAHVRNNRVTVIHGETGSGKSSRLPIMLI-------EDALERGGSGGPKP-RMFVSQPRRAATRALADRVRGDSQRLGVKFGVAMRLGHGVREGPPKAEVTFATTGYIVRLIANSPGLLDSHTHLIIDEVHERSVDTDLLCFFAKRLLHTHPTLRLIVMSATMSARLVNNYYGMADPPLFVG 281
            LPI  + + I  HV ++R+T+IHGETG GKSS +P+ML+       ED   RG     KP +MFV+QPRR A R+L  RVR  S+   +   V +RLGHG R+   +  V FAT GY+  L+A+       HTHLIIDEVHERS+DTD+LC  A+RLL +HPTLRLI+MSAT++A L   Y+G+ +PPLFVG
Sbjct:   70 LPIHDHEDTICNHVADHRITIIHGETGCGKSSTVPLMLLRHHDARREDKAFRGDPMYKKPAKMFVTQPRRIAARSLCQRVRQVSKEPDL---VGLRLGHGERDEKSQTRVWFATVGYVALLLAHHQEKFRDHTHLIIDEVHERSIDTDILCLLARRLLASHPTLRLILMSATIAAELHRQYFGVPEPPLFVG 258          
BLAST of mRNA_H-elongata_contig100109.15.1 vs. uniprot
Match: A0A7S4RFM2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4RFM2_9STRA)

HSP 1 Score: 188 bits (478), Expect = 9.730e-51
Identity = 102/203 (50.25%), Postives = 138/203 (67.98%), Query Frame = 0
Query:   95 TPSL---PIDAYREEILAHVRNNRVTVIHGETGSGKSSRLPIMLIEDALERGGSGGPKP-----RMFVSQPRRAATRALADRVRGDSQRLGVKFGVAMRLGHGVREGPPKAEVTFATTGYIVRLIANSPGLLDSHTHLIIDEVHERSVDTDLLCFFAKRLLHTHPTLRLIVMSATMSARLVNNYYGMADPPLFVGAKRFPIRS 289
            TPSL   PIDA+++ IL  V+NNRVT+I GETG GKSS++PIML+E       +  P P     RMF+ QPRR A ++L +R++    +    FG  +R+GHGVRE      V FATTGY+VRL+AN P   D  THL+IDEVHERSV+TD+LC  A+RLL  +  +RLI+MSAT++A +  +Y+ + + PLFVG + FPI+ 
Sbjct:  602 TPSLNELPIDAHKDVILTSVQNNRVTIIQGETGCGKSSKVPIMLLE-------TPPPDPTFKEVRMFICQPRRIAAKSLTERIKSTHPQYKHLFG--LRMGHGVREETKDTRVWFATTGYLVRLLANYPERFDDCTHLVIDEVHERSVETDVLCLLARRLLERNKRIRLILMSATVAAGMYRDYFQVKESPLFVGVRCFPIQE 795          
BLAST of mRNA_H-elongata_contig100109.15.1 vs. uniprot
Match: A0A3P3YNW4_PLABS (Uncharacterized protein n=2 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A3P3YNW4_PLABS)

HSP 1 Score: 186 bits (473), Expect = 1.150e-49
Identity = 100/191 (52.36%), Postives = 133/191 (69.63%), Query Frame = 0
Query:   98 LPIDAYREEILAHVRNNRVTVIHGETGSGKSSRLPIMLIEDALERGGSGGPKPRMFVSQPRRAATRALADRVRGDSQRLGVKFGVAMRLGHGVREGPPKAEVTFATTGYIVRLIANSPGLLDSHTHLIIDEVHERSVDTDLLCFFAKRLLHTHPTLRLIVMSATMSARLVNNYYGMADPP-LFVGAKRFPI 287
            LPIDA+R+ I+ H+  +RVTVI GETG GKSSR+P M+++  + R    G  PRM VSQPRR A RAL +R+R  + R G  +G  +R+GHG R   P+  + F T+GY+V+ +++ P     HTHLIIDEVHERSVD+DLLC  A+RLL  H  LRLIVMSAT+ ++L   Y+ + D   LFVGA+RFP+
Sbjct:  579 LPIDAHRDRIIDHIDRHRVTVIQGETGCGKSSRIPSMILDAEVRR----GRLPRMMVSQPRRIAARALTERLR--TSRHGPVYG--LRMGHGERSETPQTRIWFVTSGYLVQYMSHHPDAFAQHTHLIIDEVHERSVDSDLLCMLARRLLTQHEHLRLIVMSATIQSKLYCAYFRVPDDQTLFVGARRFPV 761          
BLAST of mRNA_H-elongata_contig100109.15.1 vs. uniprot
Match: A0A1E7ENH0_9STRA (Uncharacterized protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7ENH0_9STRA)

HSP 1 Score: 185 bits (470), Expect = 2.860e-49
Identity = 96/191 (50.26%), Postives = 133/191 (69.63%), Query Frame = 0
Query:   98 LPIDAYREEILAHVRNNRVTVIHGETGSGKSSRLPIMLIEDALERGGSGGPKPRMFVSQPRRAATRALADRVRGDSQRLGVKFGVAMRLGHGVREGPPK-AEVTFATTGYIVRLIANSPGLLDSHTHLIIDEVHERSVDTDLLCFFAKRLLHTHPTLRLIVMSATMSARLVNNYYGMADPPLFVGAKRFPI 287
            LPID +  EIL  +RNNRVT+IHGETG GKSSR+P+ML++     G     K + F+SQPRR A +AL +RVR     L  KF  ++R+G G +E   K  + +F TTGY+VRL+AN P   +  THL+IDEVHERSVDTDLLC  ++RLL T+ T+RL++MSAT++ ++  +Y+ + + P+ VG + FPI
Sbjct:  299 LPIDDHETEILDDIRNNRVTIIHGETGCGKSSRVPVMLLKSPPPDGSLR--KVKFFISQPRRIAAKALVERVRSCEPDLKDKF--SLRMGGGWKEYESKETQASFVTTGYLVRLLANHPEKFNEMTHLVIDEVHERSVDTDLLCLLSRRLLQTNKTIRLVLMSATLATKMYRDYFSVINEPIHVGVRTFPI 485          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig100109.15.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KLV6_9PHAE1.440e-8546.37Helicase ATP-binding domain-containing protein n=1... [more]
D8LSM0_ECTSI1.640e-7955.85Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
K0RU78_THAOC2.720e-5955.44Uncharacterized protein (Fragment) n=1 Tax=Thalass... [more]
A0A7S4MMP8_9STRA1.090e-5755.44Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
A0A7S2L2B3_9STRA1.320e-5453.37Hypothetical protein (Fragment) n=1 Tax=Skeletonem... [more]
A0A7S3JYC1_9STRA2.220e-5454.79Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
A0A7S2SUV2_9STRA5.240e-5351.56Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
A0A7S4RFM2_9STRA9.730e-5150.25Hypothetical protein (Fragment) n=1 Tax=Ditylum br... [more]
A0A3P3YNW4_PLABS1.150e-4952.36Uncharacterized protein n=2 Tax=Plasmodiophora bra... [more]
A0A1E7ENH0_9STRA2.860e-4950.26Uncharacterized protein n=1 Tax=Fragilariopsis cyl... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014001Helicase superfamily 1/2, ATP-binding domainSMARTSM00487ultradead3coord: 96..290
e-value: 4.2E-16
score: 69.5
IPR014001Helicase superfamily 1/2, ATP-binding domainPROSITEPS51192HELICASE_ATP_BIND_1coord: 108..280
score: 16.036
IPR011545DEAD/DEAH box helicase domainPFAMPF00270DEADcoord: 105..265
e-value: 1.5E-9
score: 37.9
NoneNo IPR availableGENE3D3.40.50.300coord: 90..275
e-value: 1.2E-49
score: 170.4
NoneNo IPR availablePANTHERPTHR18934ATP-DEPENDENT RNA HELICASEcoord: 97..277
NoneNo IPR availablePANTHERPTHR18934:SF148ATP-DEPENDENT RNA HELICASE DHX34-RELATEDcoord: 97..277
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 107..262

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig100109contigH-elongata_contig100109:358..2185 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig100109.15.1mRNA_H-elongata_contig100109.15.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig100109 358..2185 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig100109.15.1 ID=prot_H-elongata_contig100109.15.1|Name=mRNA_H-elongata_contig100109.15.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=292bp
TSSTSSSLSAELLMPLEHFHGPTFHALLNEYRATNGRGVEKEAEAGGEGG
LGAEDDGGELTNCASADVTGTSTISRTGDIGSGGGGGGEGAGTSTPSLPI
DAYREEILAHVRNNRVTVIHGETGSGKSSRLPIMLIEDALERGGSGGPKP
RMFVSQPRRAATRALADRVRGDSQRLGVKFGVAMRLGHGVREGPPKAEVT
FATTGYIVRLIANSPGLLDSHTHLIIDEVHERSVDTDLLCFFAKRLLHTH
PTLRLIVMSATMSARLVNNYYGMADPPLFVGAKRFPIRSVRV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR014001Helicase_ATP-bd
IPR011545DEAD/DEAH_box_helicase_dom
IPR027417P-loop_NTPase