mRNA_H-elongata_contig9938.17274.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig9938.17274.1
Unique NamemRNA_H-elongata_contig9938.17274.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig9938.17274.1 vs. uniprot
Match: A0A6H5KNV1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNV1_9PHAE)

HSP 1 Score: 258 bits (659), Expect = 6.300e-79
Identity = 157/363 (43.25%), Postives = 205/363 (56.47%), Query Frame = 1
Query:    1 TFWLPADSKATTSLEKVARSIFDFHAKTLC-----EQARVKG--GSLNVSTLQVGNNDSRTLAPHIDHKRSGHSSGCGGDVETRSDCFGAESGVEWWVQIRKEDYHADLGMPFHWDKDERLLELKGKLVCPAVSTVTYLTDFGAPTVVLKSRATDKGTVVAGDMEEAFVSYPALFKHLAFDGNFLHGVPD-VMRRDNSHADNSCKRLS-ERHSRSSEPRDDPVTASGLAARGSTQGCQKQMRVTFLANVWLSHKPSGAVPLPPSIAKYLNRAVDVWNLSFLQPVEFYPVSVEASNVVNTGRNIVSETAR---ESTVTFEASLGPISYLEVHAPSSKRLSTGDCKARHTFVLRFGKGKYARIST 1053
            TFWLPAD+   TSLE++A++I+DFH          + + + G  GS   +    GN  SR     +    S H+ G              ESG EWWVQ R+E  HA +GMPFHWDKDE +LE +G +VCP+VSTVTYLT +GAPTVVL++RAT  GTV  GD+ + FVSYPALFKHLAFDG FLHGVP+ +MR  +        R    R +R         + + L +   T+  Q +MRVTFL NVWLSHKP G   LP  +A  L+  + V  L F +P +F PV VE        +     + R    S++     LGP   LEV AP+ +RLSTG  K   +F L + +G ++RIST
Sbjct:   32 TFWLPADACPATSLERIAKAIYDFHVANKQHTHGHQDSALTGPVGSTPSAVAHSGNIPSRDKPGVVRRDASSHTGG-------------VESGAEWWVQQREEGRHASVGMPFHWDKDEEMLEQEGLVVCPSVSTVTYLTGYGAPTVVLEARATGSGTVQEGDINQTFVSYPALFKHLAFDGGFLHGVPEQLMRTGDQRVSGKVGRDGGRREARGGNDNHGIRSRTSLPSSNGTRRRQGRMRVTFLVNVWLSHKPKGITSLPADVAGSLSN-ISV-PLCFDRPGDFVPVPVEKEQETQPSQEEDGGSIRGTKPSSMLLNVPLGPTLLLEVRAPTPERLSTGGFKENDSFALVYAEGSHSRIST 379          
BLAST of mRNA_H-elongata_contig9938.17274.1 vs. uniprot
Match: D7G6Z0_ECTSI (Putative LuxR domain protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6Z0_ECTSI)

HSP 1 Score: 190 bits (483), Expect = 1.900e-54
Identity = 99/190 (52.11%), Postives = 124/190 (65.26%), Query Frame = 1
Query:    1 TFWLPADSKATTSLEKVARSIFDFHAKT---LCEQARVKGGSLNVSTLQVGNNDSRTLAPHIDHKRSGHSSGCGGDVETRSDCFGAESGVEWWVQIRKEDYHADLGMPFHWDKDERLLELKGKLVCPAVSTVTYLTDFGAPTVVLKSRATDKGTVVAGDMEEAFVSYPALFKHLAFDGNFLHGVPDVMRR 561
            TFWLPAD+   TSLEK+A++IFDFH      + +Q     G +  +   V + ++          R         D  +R+ C   ESG EWWVQ R+E  HA LGMPFHWDKDE++LE +G +VCPAVSTVTYLT +GAPTVVL++RAT   TV  GD+ + FVSYPALFKHLAFDG FLHGVP+ + R
Sbjct:   32 TFWLPADACPATSLEKIAKAIFDFHVANKQHIGQQDSAPTGPVGSTPSAVAHGENIPCRDKPGVVRR--------DTSSRTGCV--ESGAEWWVQQREEGRHASLGMPFHWDKDEQMLEQEGLVVCPAVSTVTYLTGYGAPTVVLEARATGSRTVEEGDINQTFVSYPALFKHLAFDGGFLHGVPEQLMR 211          
BLAST of mRNA_H-elongata_contig9938.17274.1 vs. uniprot
Match: A0A7R9TJB1_MICPS (Hypothetical protein (Fragment) n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7R9TJB1_MICPS)

HSP 1 Score: 114 bits (286), Expect = 4.320e-25
Identity = 86/260 (33.08%), Postives = 108/260 (41.54%), Query Frame = 1
Query:    4 FWLPADSKATTSLEKVARSIFDFHAKTLCEQARVKGGSLNVSTLQVGNNDSRTLAPHIDHKRSGHSSGCGGDVETRSDCFGAESGVEWWVQIRKEDYHADLGMPFHWDKDERLLELKGKLVCPAVSTVTYLTDFGAPTVVLKSRA------TD--KGTVVAGDMEEAFVSYPALFKHLAFDGNFLHGVPDVMRRDNSHADNSCKRLSERHSRSSEPRDDPVTASGLAARGSTQGCQKQMRVTFLANVWLSHKPSGAVPLP 759
            FWL AD+    +LE +AR++FD H      +A            Q  N D                    GD       FG   G EWW Q+R+ D      + FHWDKDE L++  G +V P +STVTYLT  GAPTVVL+  A      TD  +G++  G     FVSYP   KH++FDG FLHG    + R                                     T   +   RVTFL NVWL +KP G    P
Sbjct:   68 FWLAADAAPRCALESLARAVFDRHVPADVLRA-----------FQQTNADEARF----------------GDGR-----FGGGCGAEWWTQVRRVDDECREAVAFHWDKDEDLVDDFGVVVHPLISTVTYLTSSGAPTVVLEKTAPTSYAETDGFRGSIAGG-----FVSYPLAGKHVSFDGRFLHGASRELAR------------------------------------PTDVEEGYERVTFLVNVWLGYKPRGIDAFP 254          
BLAST of mRNA_H-elongata_contig9938.17274.1 vs. uniprot
Match: A0A7S4QU38_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4QU38_9STRA)

HSP 1 Score: 114 bits (284), Expect = 1.550e-24
Identity = 90/269 (33.46%), Postives = 111/269 (41.26%), Query Frame = 1
Query:    1 TFWLPADSKATTSLEKVARSIFDFHAKTLCEQARVKGGSLNVSTLQVGNNDSRTLAPHIDHKRSGHSSGCGGDVETRSDCFGAESGVEWWVQIR---------KEDYHADLGMPFHWDKDERLLELKGKLVCPAVSTVTYLTDFGAPTVVLKS-----RATDK--GTVVAGDMEEAFVSYPALFKHLAFDGNFLHGVPDVMRRDNSHADNSCKRLSERHSRSSEPRDDPVTASGLAARGSTQGCQKQMRVTFLANVWLSHKPSGAVPLP 759
            TFWL A  +    LEK+A+ IF  HA               V  +       R    H+            GD+E  + C     G EWWVQ+R              A  G+ FHWDKDE L ++    V P +STVTYLTD GAPT+V +      R  DK  GT + G    AFVS+P   KHL+FDG  LHG P  + R                  SSE                      ++RVTFL N+WL HKP G    P
Sbjct:   66 TFWLSARDEPRCLLEKLAKDIFAHHA---------------VVVMNNNKGSKRAKNHHL------------GDMEFSNAC-----GCEWWVQLRPSPNQKRINSNSKEAQRGIQFHWDKDETLRDVADVFVHPHLSTVTYLTDNGAPTLVFEESMPNERLLDKTAGTGIKG----AFVSWPLRGKHLSFDGRLLHGAPSDLLR------------------SSET--------------------DELRVTFLVNIWLYHKPLGIEKFP 260          
BLAST of mRNA_H-elongata_contig9938.17274.1 vs. uniprot
Match: A0A813AZR0_9DINO (KCNB2 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A813AZR0_9DINO)

HSP 1 Score: 115 bits (288), Expect = 3.410e-24
Identity = 74/201 (36.82%), Postives = 99/201 (49.25%), Query Frame = 1
Query:  196 HSSGCGGDVETRSDCFGAESGVEWWVQIRKEDYHADLGMPFHWDKDERLLELKGKLVCPAVSTVTYLTDFGAPTVVLKSRATDKGTVVA--GDMEEAFVSYPALFKHLAFDGNFLHG-VPDVMRRDNSHADNSCKRLSERHSRSSEPRDDPVTASGLAARGSTQGCQKQMRVTFLANVWLSHKPSGAVPLPPSIAKYLNRA 789
            H++GC  D         A SG EWW Q+R+  +H + G+ FHWD DE  +E     V P +STVTYL+D GAPT+VL  R + + ++ +  G + E  +S+P L+KHL FDG FLHG VP V                                             K +RVTFL NVWL+H+PS    LP S++K L  A
Sbjct:  166 HTAGCRFDP--------ARSGAEWWAQVRQSGHHEE-GIHFHWDTDEVAVERHDVNVHPHLSTVTYLSDSGAPTLVLACRNSRRPSLTSAYGPIYEGALSWPKLWKHLVFDGQFLHGTVPSVEY------------------------------------------SKGLRVTFLVNVWLNHRPSNCHRLPKSLSKRLGDA 315          
BLAST of mRNA_H-elongata_contig9938.17274.1 vs. uniprot
Match: A0A1Q9EDB1_SYMMI (Uncharacterized protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A1Q9EDB1_SYMMI)

HSP 1 Score: 115 bits (288), Expect = 6.800e-24
Identity = 74/201 (36.82%), Postives = 99/201 (49.25%), Query Frame = 1
Query:  196 HSSGCGGDVETRSDCFGAESGVEWWVQIRKEDYHADLGMPFHWDKDERLLELKGKLVCPAVSTVTYLTDFGAPTVVLKSRATDKGTVVA--GDMEEAFVSYPALFKHLAFDGNFLHG-VPDVMRRDNSHADNSCKRLSERHSRSSEPRDDPVTASGLAARGSTQGCQKQMRVTFLANVWLSHKPSGAVPLPPSIAKYLNRA 789
            H++GC  D         A SG EWW Q+R+  +H + G+ FHWD DE  +E     V P +STVTYL+D GAPT+VL  R + + ++ +  G + E  +S+P L+KHL FDG FLHG VP V                                             K +RVTFL NVWL+H+PS    LP S++K L  A
Sbjct: 1396 HTAGCRFDP--------ARSGAEWWAQVRQSGHHEE-GIHFHWDTDEVAVERHDVNVHPHLSTVTYLSDSGAPTLVLACRNSRRPSLTSAYGPIYEGALSWPKLWKHLVFDGQFLHGTVPSVEY------------------------------------------SKGLRVTFLVNVWLNHRPSNCHRLPKSLSKRLGDA 1545          
BLAST of mRNA_H-elongata_contig9938.17274.1 vs. uniprot
Match: B7FQJ1_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FQJ1_PHATC)

HSP 1 Score: 110 bits (275), Expect = 4.030e-23
Identity = 87/262 (33.21%), Postives = 121/262 (46.18%), Query Frame = 1
Query:  196 HSSGCGGDVETRSDCFGAESGVEWWVQIR---------------------KEDYHADLGMPFHWDKDERL-LELKGKL-VCPAVSTVTYLTDFGAPTVVLKSRATD-------KGTVVAGD--MEEAFVSYPALFKHLAFDGNFLHGVPDVMRRDNSHADNSCKRLSERHSRSSEPRDDPVTASGLAARGSTQGCQKQMRVTFLANVWLSHKPSGAVPLPPS-IAKYLNRAVDVWNLSFLQP--VEFYPVSVEASNVVNTGR 876
            H+SGC  D  T        SG EWWVQIR                     ++   ++ G+ FHWDKDE L L   G   + P +STVTYLT  GAPT+ +  R  +        G  V+ +    E F+S+P   KHL+FDG FLH  P  +  D +                 E + + VT  GL A    +  ++  RVTFL N+WL+++P    P P S I K     V+V +LSF +   ++   + V A NV +T R
Sbjct:  100 HTSGCAYDPGT--------SGAEWWVQIRPSPEAGRYSMHDKPHKRIGDGEQKDMSETGISFHWDKDEDLRLHCGGTTYIHPHLSTVTYLTSIGAPTLAVNCRVNNFTGEWIVPGNNVSSEHVQMEGFLSWPKAGKHLSFDGRFLHAAPPDLMEDGAF----------------EKQINYVTKEGLDALEVNRVRRRHRRVTFLVNIWLNYRPFDVQPFPESMINKMSGSVVEVGSLSFKKEGVIDAAILEVPAENVKDTDR 337          
BLAST of mRNA_H-elongata_contig9938.17274.1 vs. uniprot
Match: A0A812QHB8_9DINO (Hypothetical protein n=1 Tax=Symbiodinium sp. CCMP2456 TaxID=1519616 RepID=A0A812QHB8_9DINO)

HSP 1 Score: 111 bits (278), Expect = 1.140e-22
Identity = 72/201 (35.82%), Postives = 100/201 (49.75%), Query Frame = 1
Query:  196 HSSGCGGDVETRSDCFGAESGVEWWVQIRKEDYHADLGMPFHWDKDERLLELKGKLVCPAVSTVTYLTDFGAPTVVLKSRATDKGTVVA--GDMEEAFVSYPALFKHLAFDGNFLHG-VPDVMRRDNSHADNSCKRLSERHSRSSEPRDDPVTASGLAARGSTQGCQKQMRVTFLANVWLSHKPSGAVPLPPSIAKYLNRA 789
            H++GC  D         A SG EWW Q+R+  +H + G+ FHWD DE  +E     V P +STVTYL++ GAPT+VL  R + + ++ +  G + E  +S+P L+KHL FDG FLHG VP +                         +D P                   RVTFL N+WL+H+PS    LP S++K L  A
Sbjct:  794 HTAGCRFDP--------ARSGAEWWAQVRQSGHHEE-GIQFHWDTDEVAVERHDVNVHPHLSTVTYLSESGAPTLVLACRNSRRPSLTSAYGPIHEGALSWPKLWKHLVFDGQFLHGTVPSL----------------------EYGKDGP-------------------RVTFLVNIWLNHRPSNCHRLPKSLSKRLGDA 944          
BLAST of mRNA_H-elongata_contig9938.17274.1 vs. uniprot
Match: L1JH63_GUITC (Uncharacterized protein n=2 Tax=Guillardia theta TaxID=55529 RepID=L1JH63_GUITC)

HSP 1 Score: 108 bits (270), Expect = 1.370e-22
Identity = 83/287 (28.92%), Postives = 115/287 (40.07%), Query Frame = 1
Query:    4 FWLPADSKATTSLEKVARSIFDFHAKTLCEQARVKGGSLNVSTLQVGNNDSRTLAPHIDHKRSGHSSGCGGDVETRSDCFGAESGVEWWVQIRKEDYHADLGMPFHWDKDERLLELKGKLVCPAVSTVTYLTDFGAPTVVLKSRATDKGTVVAGDMEEAFVSYPALFKHLAFDGNFLHGVPDVMRRDNSHADNSCKRLSERHSRSSEPRDDPVTASGLAARGSTQGCQKQMRVTFLANVWLSHKPSGAVPLPPSIAKYLNRAVDVWNLSFLQPVEFYPVSVEASNVV 864
            FWL A++K   +LE +A+ IF+FH       A VKG                                     ETRS       G EWWVQ R         + FHWD+DE   +   + V P + TVTYL++ GAPT+VL      KG   + D+    +S+P L KH+ FDG FLHGVP  + R                      ++D  T                 R+TFL N+W+SH P+   P P    K ++        +F  PV F  + + +   V
Sbjct:  130 FWLAANAKPRFTLEALAKQIFEFHT------ADVKGYD-----------------------------------ETRS-------GAEWWVQFRGTKSAHGKSIGFHWDRDEFYADRTDQNVHPQIGTVTYLSEHGAPTLVLDQSPIPKGE--SRDIHSGALSHPKLGKHICFDGRFLHGVPAELSR--------------------HLKEDQFT-----------------RITFLVNIWISHIPTDTAPWPEEDVKSMS--------TFSLPVSFSQILLRSPTAV 321          
BLAST of mRNA_H-elongata_contig9938.17274.1 vs. uniprot
Match: A0A7S4BXK0_CHRCT (Hypothetical protein n=2 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4BXK0_CHRCT)

HSP 1 Score: 107 bits (266), Expect = 2.280e-21
Identity = 91/286 (31.82%), Postives = 128/286 (44.76%), Query Frame = 1
Query:  253 SGVEWWVQIRKEDYHADLGMPFHWDKDERLLELKGKLVCPAVSTVTYLTDFGAPTVVLKSRATDKGTVV-AGDMEEAFVSYPALFKHLAFDGNFLHGVPDVMRRDNSHADNS-CKRLSERHSRSSEPRDDPVTASGLAARGSTQGCQ--KQMRVTFLANVWLSHKPSGAVPLPPSIAKYLNRAVDVWNLSFLQPVEFYP----------------------VSVEASNVVNTGRNIVSET---ARESTVTFEASLGPISYLEVHAPSSKRLSTGDCKARHTFVLRF 1023
            SG EWW Q+   D   D+G  FHWD+D  +   +G LV P + TVTYL+D GAPTVV+  R+    +    G+   A   +P   +HL+FDG  LHG P  + R++     + C+R  +  S   +                  G +     RVTFL N+W +HKP GA  LPP IA+ L+  VD+    F  P   Y                       V+  A   VNT  +  +++   A +S V+  A+    S+L    P+  RL    C A  T  LRF
Sbjct:  227 SGAEWWTQVI--DAQDDIG--FHWDRDYDMQADQGILVHPQLGTVTYLSDVGAPTVVVGHRSQLMASAHNEGEAAGADCCWPRAGRHLSFDGQLLHGAPSELARESIAPPRAECERADQTSSTGKQKXXXXXXXXXXXXXXXGSGAKGPHSRRVTFLVNIWCNHKPWGAEKLPPKIAQKLSN-VDLG--CFAAPPSKYASSDPRAPHSADETEKAGPSAVKVAAAAKLSVNTAVHAAADSTDAAADSVVSAAATTNGNSHLTKVVPTKVRL----CTAAATRTLRF 501          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig9938.17274.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KNV1_9PHAE6.300e-7943.25Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G6Z0_ECTSI1.900e-5452.11Putative LuxR domain protein n=1 Tax=Ectocarpus si... [more]
A0A7R9TJB1_MICPS4.320e-2533.08Hypothetical protein (Fragment) n=1 Tax=Micromonas... [more]
A0A7S4QU38_9STRA1.550e-2433.46Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A813AZR0_9DINO3.410e-2436.82KCNB2 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=2... [more]
A0A1Q9EDB1_SYMMI6.800e-2436.82Uncharacterized protein n=1 Tax=Symbiodinium micro... [more]
B7FQJ1_PHATC4.030e-2333.21Predicted protein n=2 Tax=Phaeodactylum tricornutu... [more]
A0A812QHB8_9DINO1.140e-2235.82Hypothetical protein n=1 Tax=Symbiodinium sp. CCMP... [more]
L1JH63_GUITC1.370e-2228.92Uncharacterized protein n=2 Tax=Guillardia theta T... [more]
A0A7S4BXK0_CHRCT2.280e-2131.82Hypothetical protein n=2 Tax=Chrysotila carterae T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig9938contigH-elongata_contig9938:7422..9347 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score191.8
Seed ortholog evalue5.6e-46
Seed eggNOG ortholog2880.D7G6Z0
EggNOG OGs2E8EV@1,2SEXB@2759
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionputative LuxR domain protein
Ec32 orthologEc-01_011710.1
Exons3
Model size1258
Cds size1107
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig9938.17274.1prot_H-elongata_contig9938.17274.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig9938 7571..9347 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931382.8327277-UTR-H-elongata_contig9938:7421..75701622931382.8327277-UTR-H-elongata_contig9938:7421..7570Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig9938 7422..7570 -
1691679813.6150005-UTR-H-elongata_contig9938:7421..75701691679813.6150005-UTR-H-elongata_contig9938:7421..7570Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig9938 7422..7570 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931382.8700855-CDS-H-elongata_contig9938:7570..79991622931382.8700855-CDS-H-elongata_contig9938:7570..7999Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig9938 7571..7999 -
1691679813.627434-CDS-H-elongata_contig9938:7570..79991691679813.627434-CDS-H-elongata_contig9938:7570..7999Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig9938 7571..7999 -
1622931382.8869426-CDS-H-elongata_contig9938:8189..84381622931382.8869426-CDS-H-elongata_contig9938:8189..8438Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig9938 8190..8438 -
1691679813.6386585-CDS-H-elongata_contig9938:8189..84381691679813.6386585-CDS-H-elongata_contig9938:8189..8438Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig9938 8190..8438 -
1622931382.8999562-CDS-H-elongata_contig9938:8918..93471622931382.8999562-CDS-H-elongata_contig9938:8918..9347Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig9938 8919..9347 -
1691679813.6492372-CDS-H-elongata_contig9938:8918..93471691679813.6492372-CDS-H-elongata_contig9938:8918..9347Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig9938 8919..9347 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig9938.17274.1

>prot_H-elongata_contig9938.17274.1 ID=prot_H-elongata_contig9938.17274.1|Name=mRNA_H-elongata_contig9938.17274.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=369bp
TFWLPADSKATTSLEKVARSIFDFHAKTLCEQARVKGGSLNVSTLQVGNN
DSRTLAPHIDHKRSGHSSGCGGDVETRSDCFGAESGVEWWVQIRKEDYHA
DLGMPFHWDKDERLLELKGKLVCPAVSTVTYLTDFGAPTVVLKSRATDKG
TVVAGDMEEAFVSYPALFKHLAFDGNFLHGVPDVMRRDNSHADNSCKRLS
ERHSRSSEPRDDPVTASGLAARGSTQGCQKQMRVTFLANVWLSHKPSGAV
PLPPSIAKYLNRAVDVWNLSFLQPVEFYPVSVEASNVVNTGRNIVSETAR
ESTVTFEASLGPISYLEVHAPSSKRLSTGDCKARHTFVLRFGKGKYARIS
TRSVEDNPQRKRRRNVSE*
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mRNA from alignment at H-elongata_contig9938:7422..9347-

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig9938.17274.1 ID=mRNA_H-elongata_contig9938.17274.1|Name=mRNA_H-elongata_contig9938.17274.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1926bp|location=Sequence derived from alignment at H-elongata_contig9938:7422..9347- (Himanthalia elongata Himel1 dioecious)
ACGTTTTGGCTGCCCGCGGACTCCAAGGCGACGACCTCCTTGGAGAAAGT CGCGCGCTCAATCTTCGACTTCCATGCGAAGACTCTTTGCGAGCAAGCTC GAGTCAAAGGCGGATCACTCAATGTTAGCACTCTTCAAGTGGGGAACAAC GACTCCAGAACACTTGCGCCTCACATTGACCATAAGCGATCGGGACATTC TAGCGGGTGCGGCGGTGATGTCGAGACCCGTAGTGATTGCTTCGGGGCAG AATCCGGCGTGGAGTGGTGGGTGCAGATCCGGAAGGAGGACTACCACGCG GACCTAGGCATGCCTTTTCACTGGGACAAGGATGAACGGCTACTTGAACT TAAAGGAAAGCTCGTGTGTCCCGCGGTTTCGACAGTGACGTACTTGACGG ACTTCGGCGCGCCTACCGTGGTGCTCAAGGTGCGGTTAGCTGTAAATATA TGAATTTTTATATATTACGGAACCGCTTACGGGATATTCCGCCGATGGCA CACCGATAATATCAGCTGAAACACATGCGAACTCAAGAGGTTAAGGGCGT TTTCGACTGAAGCTGTCCCACTGGCCAATACTGCATTGGGTATCGACTTC TGCGCGACATCGCATAGAAATATACTGGATTGTTACTTAAGTTCTCCTGC TGCTGCCGTTCATAGCTAATTATTTTCTCGAGGGAAAAATAATGGGCGAT TTCCAACCTTACGTTCGTGCTTTGATACGACAAGGTTGCCACTTGACAAG CCGCGGGTGGCCCTTTCTAGGCCAGCTTTTGGCACGTTATGGTTTCGTTA CTTCCGGGACATTGGCGAGGTTTTCGATATGCACACTAGTATCGCTTGTC GGTCGAGATCGGCGTCCATCGCGACTGACCCTGAGGAAAATTGCGGCGTT GTTGCCCAGTCGCGTGCAACAGACAAGGGGACCGTGGTAGCAGGAGATAT GGAAGAAGCATTCGTGAGCTACCCCGCGCTCTTCAAGCACCTCGCCTTCG ATGGAAACTTTCTTCACGGAGTGCCAGACGTCATGCGGAGAGATAATAGC CATGCAGATAACTCCTGTAAGCGTCTGTCCGAGAGGCATAGTCGGAGCTC GGAACCTCGCGATGATCCTGTGACGGCGTCAGGGCTTGCGGCCCGCGGTT CTACCCAGGTAAAAAAACATTACACGCAAGATCACCATATAATATGAGGA CATTCGCCGTGGTGCACGCATGTTGCCTTGGGAAACCAAGCGGCGAAACG CTAGTTAGTACAAATGCCTTCAAATTCCCAATTTTATGGATGCTTCAGCC TCGCCGCTTGCGCCACTTTCTGCCGAAATTGAACTATCCCTCCCTCAGGG ATGCCAGAAACAAATGCGTGTGACATTCCTCGCAAACGTGTGGTTGTCCC ACAAGCCTTCCGGGGCAGTGCCGCTCCCTCCAAGCATCGCCAAATATCTC AACAGAGCCGTTGATGTCTGGAACCTTTCGTTCCTGCAGCCAGTGGAGTT TTACCCTGTATCGGTTGAGGCCAGTAACGTGGTAAACACTGGAAGAAATA TCGTTTCGGAAACCGCAAGGGAGTCAACCGTTACATTCGAGGCATCGCTG GGGCCGATCTCTTACCTTGAGGTCCACGCCCCATCATCAAAAAGACTGTC GACGGGCGATTGCAAGGCTCGTCATACATTCGTGTTGCGTTTTGGGAAGG GCAAGTACGCGCGTATCTCGACACGAAGTGTGGAGGACAATCCACAAAGA AAGCGCCGGAGAAATGTCAGTGAATAGCGGACCATGCACCAAACGGCCAT TCTTTGAGTTAAAACGGCGGCATGGTACGGTTTATGGCGAGATCAGAGAA GAGGGATCGCTTTGATTACCGAGAAGGAGGCCTCGTCGGTGGACATGAAA CGACGTCATGGAAATATAATTGACTT
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Coding sequence (CDS) from alignment at H-elongata_contig9938:7422..9347-

>mRNA_H-elongata_contig9938.17274.1 ID=mRNA_H-elongata_contig9938.17274.1|Name=mRNA_H-elongata_contig9938.17274.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2214bp|location=Sequence derived from alignment at H-elongata_contig9938:7422..9347- (Himanthalia elongata Himel1 dioecious)
ACGTTTTGGCTGCCCGCGGACTCCAAGGCGACGACCTCCTTGGAGAAAGT
CGCGCGCTCAATCTTCGACTTCCATGCGAAGACTCTTTGCGAGCAAGCTC
GAGTCAAAGGCGGATCACTCAATGTTAGCACTCTTCAAGTGGGGAACAAC
GACTCCAGAACACTTGCGCCTCACATTGACCATAAGCGATCGGGACATTC
TAGCGGGTGCGGCGGTGATGTCGAGACCCGTAGTGATTGCTTCGGGGCAG
AATCCGGCGTGGAGTGGTGGGTGCAGATCCGGAAGGAGGACTACCACGCG
GACCTAGGCATGCCTTTTCACTGGGACAAGGATGAACGGCTACTTGAACT
TAAAGGAAAGCTCGTGTGTCCCGCGGTTTCGACAGTGACGTACTTGACGG
ACTTCGGCGCGCCTACCGTGGTGCTCAAGACGTTTTGGCTGCCCGCGGAC
TCCAAGGCGACGACCTCCTTGGAGAAAGTCGCGCGCTCAATCTTCGACTT
CCATGCGAAGACTCTTTGCGAGCAAGCTCGAGTCAAAGGCGGATCACTCA
ATGTTAGCACTCTTCAAGTGGGGAACAACGACTCCAGAACACTTGCGCCT
CACATTGACCATAAGCGATCGGGACATTCTAGCGGGTGCGGCGGTGATGT
CGAGACCCGTAGTGATTGCTTCGGGGCAGAATCCGGCGTGGAGTGGTGGG
TGCAGATCCGGAAGGAGGACTACCACGCGGACCTAGGCATGCCTTTTCAC
TGGGACAAGGATGAACGGCTACTTGAACTTAAAGGAAAGCTCGTGTGTCC
CGCGGTTTCGACAGTGACGTACTTGACGGACTTCGGCGCGCCTACCGTGG
TGCTCAAGTCGCGTGCAACAGACAAGGGGACCGTGGTAGCAGGAGATATG
GAAGAAGCATTCGTGAGCTACCCCGCGCTCTTCAAGCACCTCGCCTTCGA
TGGAAACTTTCTTCACGGAGTGCCAGACGTCATGCGGAGAGATAATAGCC
ATGCAGATAACTCCTGTAAGCGTCTGTCCGAGAGGCATAGTCGGAGCTCG
GAACCTCGCGATGATCCTGTGACGGCGTCAGGGCTTGCGGCCCGCGGTTC
TACCCAGTCGCGTGCAACAGACAAGGGGACCGTGGTAGCAGGAGATATGG
AAGAAGCATTCGTGAGCTACCCCGCGCTCTTCAAGCACCTCGCCTTCGAT
GGAAACTTTCTTCACGGAGTGCCAGACGTCATGCGGAGAGATAATAGCCA
TGCAGATAACTCCTGTAAGCGTCTGTCCGAGAGGCATAGTCGGAGCTCGG
AACCTCGCGATGATCCTGTGACGGCGTCAGGGCTTGCGGCCCGCGGTTCT
ACCCAGGGATGCCAGAAACAAATGCGTGTGACATTCCTCGCAAACGTGTG
GTTGTCCCACAAGCCTTCCGGGGCAGTGCCGCTCCCTCCAAGCATCGCCA
AATATCTCAACAGAGCCGTTGATGTCTGGAACCTTTCGTTCCTGCAGCCA
GTGGAGTTTTACCCTGTATCGGTTGAGGCCAGTAACGTGGTAAACACTGG
AAGAAATATCGTTTCGGAAACCGCAAGGGAGTCAACCGTTACATTCGAGG
CATCGCTGGGGCCGATCTCTTACCTTGAGGTCCACGCCCCATCATCAAAA
AGACTGTCGACGGGCGATTGCAAGGCTCGTCATACATTCGTGTTGCGTTT
TGGGAAGGGCAAGTACGCGCGTATCTCGACACGAAGTGTGGAGGACAATC
CACAAAGAAAGCGCCGGAGAAATGTCAGTGAATAGGGATGCCAGAAACAA
ATGCGTGTGACATTCCTCGCAAACGTGTGGTTGTCCCACAAGCCTTCCGG
GGCAGTGCCGCTCCCTCCAAGCATCGCCAAATATCTCAACAGAGCCGTTG
ATGTCTGGAACCTTTCGTTCCTGCAGCCAGTGGAGTTTTACCCTGTATCG
GTTGAGGCCAGTAACGTGGTAAACACTGGAAGAAATATCGTTTCGGAAAC
CGCAAGGGAGTCAACCGTTACATTCGAGGCATCGCTGGGGCCGATCTCTT
ACCTTGAGGTCCACGCCCCATCATCAAAAAGACTGTCGACGGGCGATTGC
AAGGCTCGTCATACATTCGTGTTGCGTTTTGGGAAGGGCAAGTACGCGCG
TATCTCGACACGAAGTGTGGAGGACAATCCACAAAGAAAGCGCCGGAGAA
ATGTCAGTGAATAG
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