mRNA_H-elongata_contig94509.16873.1 (mRNA) Himanthalia elongata Himel1 dioecious
|
Overview
Homology
BLAST of mRNA_H-elongata_contig94509.16873.1 vs. uniprot
Match: D8LHF0_ECTSI (Glutathione S-transferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHF0_ECTSI) HSP 1 Score: 135 bits (340), Expect = 3.160e-35 Identity = 64/90 (71.11%), Postives = 77/90 (85.56%), Query Frame = 3
Query: 6 KLRKDLVETYLPLWLGNLEKFLEAAGGMYFAGNKLSIGDIAVVARLNWLKDGTLEGIPTTIVDEYPLLLALVDRVMSEPKIVAYMKNAPR 275
+LRKDLVET LP WL NLEK L+ AGG YFAG+KLSIGDIAVVARLNWL DGT EG+P+T++DE PL+ +LV RVM+EP+IVAYM+ P+
Sbjct: 116 QLRKDLVETLLPTWLANLEKALKLAGGEYFAGDKLSIGDIAVVARLNWLTDGTFEGVPSTLLDESPLVSSLVQRVMAEPRIVAYMEERPK 205
BLAST of mRNA_H-elongata_contig94509.16873.1 vs. uniprot
Match: A0A6H5JAZ7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAZ7_9PHAE) HSP 1 Score: 133 bits (334), Expect = 5.840e-35 Identity = 62/90 (68.89%), Postives = 77/90 (85.56%), Query Frame = 3
Query: 6 KLRKDLVETYLPLWLGNLEKFLEAAGGMYFAGNKLSIGDIAVVARLNWLKDGTLEGIPTTIVDEYPLLLALVDRVMSEPKIVAYMKNAPR 275
+LRKDLVET LP WL N EK L+ AGG YFAG+KLSIGDIAVVARLNWL DGT EG+P+T+++E+PLL +LV R+M+EP+IVAYM+ P+
Sbjct: 66 QLRKDLVETLLPPWLTNSEKALKLAGGKYFAGDKLSIGDIAVVARLNWLTDGTFEGVPSTLLEEFPLLSSLVQRIMAEPRIVAYMEGRPK 155
BLAST of mRNA_H-elongata_contig94509.16873.1 vs. uniprot
Match: B1N8E6_9PHAE (Glutathione S-transferase 1 n=1 Tax=Laminaria digitata TaxID=80365 RepID=B1N8E6_9PHAE) HSP 1 Score: 127 bits (319), Expect = 3.960e-32 Identity = 61/90 (67.78%), Postives = 73/90 (81.11%), Query Frame = 3
Query: 3 LKLRKDLVETYLPLWLGNLEKFLEAAGGMYFAGNKLSIGDIAVVARLNWLKDGTLEGIPTTIVDEYPLLLALVDRVMSEPKIVAYMKNAP 272
L++RK + + YLP WLGNLE+ L+AAGG YFAG KLSIGDI VVARLNWLK G L+GIP TIVD++PLL ALV VMSE KIV Y+++ P
Sbjct: 116 LEMRKAMTDNYLPTWLGNLERALKAAGGSYFAGGKLSIGDIYVVARLNWLKRGALDGIPDTIVDDFPLLSALVQSVMSEEKIVKYLESGP 205
BLAST of mRNA_H-elongata_contig94509.16873.1 vs. uniprot
Match: D8LK37_ECTSI (Glutathione S-transferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK37_ECTSI) HSP 1 Score: 123 bits (309), Expect = 1.250e-30 Identity = 61/91 (67.03%), Postives = 74/91 (81.32%), Query Frame = 3
Query: 6 KLRKDLVETYLPLWLGNLEKFLEAAGGMYFAGNKLSIGDIAVVARLNWLKDGTL-EGIPTTIVDEYPLLLALVDRVMSEPKIVAYMKNAPR 275
+L KDLVE LP WL NLEK L+ AGG YFAG+KLSIGDIAVVARLNWL DGT E +P+ I++E+PLL +LV RVM+EP+IVAYM+ P+
Sbjct: 116 QLLKDLVEKLLPPWLANLEKALKLAGGKYFAGDKLSIGDIAVVARLNWLTDGTFDESVPSAILEEFPLLSSLVQRVMAEPRIVAYMEERPK 206
BLAST of mRNA_H-elongata_contig94509.16873.1 vs. uniprot
Match: B1N8E7_9PHAE (Glutathione S-transferase 2 n=1 Tax=Laminaria digitata TaxID=80365 RepID=B1N8E7_9PHAE) HSP 1 Score: 123 bits (309), Expect = 1.430e-30 Identity = 59/93 (63.44%), Postives = 74/93 (79.57%), Query Frame = 3
Query: 3 LKLRKDLVETYLPLWLGNLEKFLEAAGGMYFAGNKLSIGDIAVVARLNWLKDGTLEGIPTTIVDEYPLLLALVDRVMSEPKIVAYMKNAPRST 281
+++R++LV +LP WLGNLEK L AGG YFAG KLSIGDIAVVARL WLK+G+L+GIPT+IVDEYPLL AL++RV +EP I Y + +T
Sbjct: 118 MEMRQNLVRDFLPTWLGNLEKALANAGGTYFAGGKLSIGDIAVVARLVWLKEGSLDGIPTSIVDEYPLLSALIERVNAEPNIAKYHQERSETT 210
BLAST of mRNA_H-elongata_contig94509.16873.1 vs. uniprot
Match: D7FHE9_ECTSI (Glutathione S-transferase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FHE9_ECTSI) HSP 1 Score: 84.3 bits (207), Expect = 8.220e-17 Identity = 38/86 (44.19%), Postives = 59/86 (68.60%), Query Frame = 3
Query: 3 LKLRKDLVETYLPLWLGNLEKFLEAAGGMYFAGNKLSIGDIAVVARLNWLKDGTLEGIPTTIVDEYPLLLALVDRVMSEPKIVAYM 260
+++R DL Y+P WL N+EK L + G +F G ++++ D+ + RL+ +K+G L+GIPTTI D P L AL D V+SEPK+ A++
Sbjct: 24 MEMRADLAANYIPKWLSNMEKQLSSTDGTFFDG-QMTVADMMIAYRLHHMKNGVLDGIPTTIADSCPSLCALYDAVVSEPKVAAFL 108
BLAST of mRNA_H-elongata_contig94509.16873.1 vs. uniprot
Match: A0A6H5KRV2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRV2_9PHAE) HSP 1 Score: 85.1 bits (209), Expect = 3.930e-16 Identity = 37/86 (43.02%), Postives = 60/86 (69.77%), Query Frame = 3
Query: 3 LKLRKDLVETYLPLWLGNLEKFLEAAGGMYFAGNKLSIGDIAVVARLNWLKDGTLEGIPTTIVDEYPLLLALVDRVMSEPKIVAYM 260
+++R DL ++P WL N+EK L + G +F +K+++ DI + RL+ +++G L+GIPTTI D YP L A+ D V+SEPK+ A++
Sbjct: 116 MEMRADLAANFIPKWLSNMEKQLSSTDGTFFF-DKMTVADIMIACRLHPMRNGVLDGIPTTIADSYPSLCAMCDAVVSEPKVAAFL 200
BLAST of mRNA_H-elongata_contig94509.16873.1 vs. uniprot
Match: A0A2E1MVP6_9BACT (Uncharacterized protein n=1 Tax=Candidatus Marinimicrobia bacterium TaxID=2026760 RepID=A0A2E1MVP6_9BACT) HSP 1 Score: 71.6 bits (174), Expect = 3.950e-11 Identity = 35/84 (41.67%), Postives = 49/84 (58.33%), Query Frame = 3
Query: 12 RKDLVETYLPLWLGNLEKFL-EAAGGMYFAGNKLSIGDIAVVARLNWLKDGTLEGIPTTIVDEYPLLLALVDRVMSEPKIVAYM 260
RK L +LP W LE L + +YF N L+I D+A+ L WLK G L+G+PTTI+DEY L L + + PK++ +M
Sbjct: 127 RKILATNHLPKWFQFLENLLRQNTKSVYFVDNNLTIADLAIWRLLGWLKSGMLDGVPTTILDEYENLNKLREEIYKNPKVIKWM 210
BLAST of mRNA_H-elongata_contig94509.16873.1 vs. uniprot
Match: A0A7Y1XUA7_9GAMM (Glutathione S-transferase n=1 Tax=Woeseiaceae bacterium TaxID=2026806 RepID=A0A7Y1XUA7_9GAMM) HSP 1 Score: 66.6 bits (161), Expect = 1.940e-9 Identity = 34/86 (39.53%), Postives = 53/86 (61.63%), Query Frame = 3
Query: 12 RKDLVETYLPLWLGNLEKFLEAAGGMYFAGNKLSIGDIAVVARLNWLKDGTLEGIPTTIVDEY-PLLLALVDRVMSEPKIVAYMKN 266
R+ LVE +L ++ LE L GG YFA KL+I D+ V + L+ GTL+ +PT +VD+ P L A +RV +P+++AY ++
Sbjct: 118 REKLVEGWLTTYIRGLEGLLTRGGGEYFADGKLTIADLKVFTQTRSLRSGTLDHVPTDLVDKLAPGLAAHQERVQDDPRVIAYYES 203
BLAST of mRNA_H-elongata_contig94509.16873.1 vs. uniprot
Match: UPI0006813309 (glutathione S-transferase C-terminal domain-containing protein n=1 Tax=Hyphomicrobiales TaxID=356 RepID=UPI0006813309) HSP 1 Score: 60.5 bits (145), Expect = 6.580e-8 Identity = 31/83 (37.35%), Postives = 51/83 (61.45%), Query Frame = 3
Query: 12 RKDLVETYLPLWLGNLEKFLEAAGGMYFAGNKLSIGDIAVVARLNWLKDGTLEGIPTTIVDEY-PLLLALVDRVMSEPKIVAY 257
RK LV+ +P +L L + LEA GG YFAG++LS+ D+ V+ + L G L+ +P + + P L+ +RVM++ ++ AY
Sbjct: 26 RKALVDGPIPFYLTRLGQRLEAHGGRYFAGDRLSVADLKVLMLIRQLTSGVLDHVPMDLTERMAPALVEHSERVMNDARVKAY 108 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig94509.16873.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 21
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig94509.16873.1 >prot_H-elongata_contig94509.16873.1 ID=prot_H-elongata_contig94509.16873.1|Name=mRNA_H-elongata_contig94509.16873.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=70bp MYFAGNKLSIGDIAVVARLNWLKDGTLEGIPTTIVDEYPLLLALVDRVMSback to top mRNA from alignment at H-elongata_contig94509:466..1929- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig94509.16873.1 ID=mRNA_H-elongata_contig94509.16873.1|Name=mRNA_H-elongata_contig94509.16873.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1464bp|location=Sequence derived from alignment at H-elongata_contig94509:466..1929- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig94509:466..1929- >mRNA_H-elongata_contig94509.16873.1 ID=mRNA_H-elongata_contig94509.16873.1|Name=mRNA_H-elongata_contig94509.16873.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=420bp|location=Sequence derived from alignment at H-elongata_contig94509:466..1929- (Himanthalia elongata Himel1 dioecious)back to top |